Gene annotation
Transcriptome id Sobic.003G099300.1
Synonym DCP5, Sb03g008320
Functional annotation expressed protein
UniProt C5XEW0
Pfam PF14438 PF09532
Panther DB PTHR13586 PTHR13586:SF4
NCBI CDD -
KEGG Orthology K18749; LSM14, RAP55, protein LSM14
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G26110 : decapping 5
RAP-DB (Rice) LOC_Os01g02090.1 : expressed protein
MaizeGDB (Corn) Zm00025a023783 , Zm00025a035441 , Zm00025a001088
Brachypodium KQK02356
Barley HORVU3Hr1G000880.1 , HORVU3Hr1G000880.3 , HORVU3Hr1G000880.2 , HORVU3Hr1G000880.5 , HORVU3Hr1G000880.4 , HORVU3Hr1G000880.7 , HORVU3Hr1G000880.6 , HORVU3Hr1G000880.9 , HORVU3Hr1G000880.8
Wheat TraesCS3D02G004500 , TraesCS3A02G006100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G269100 zinc finger family protein, putative, expressed -
2 Sobic.004G039600 proteasome/cyclosome repeat containing protein, expressed K03028: PSMD2, 26S proteasome regulatory subunit N1
3 Sobic.005G216300 RNA recognition motif containing protein, expressed K12837: splicing factor U2AF 65 kDa subunit
4 Sobic.K004100 zinc finger, C3HC4 type domain containing protein, expressed -
5 Sobic.001G369000 adapitin protein, putative, expressed K12392: AP-1 complex subunit beta-1
6 Sobic.005G115500 bifunctional dihydrofolate reductase-thymidylate synthase, putative, expressed K13998: dihydrofolate reductase / thymidylate synthase
7 Sobic.002G256200 cyclin, putative, expressed K15161: CCNC, cyclin-C
8 Sobic.006G056200 transport protein particle component, Bet3, domain containing protein, expressed -
9 Sobic.009G231700 GTP binding protein, putative, expressed -
10 Sobic.010G239800 hydrolase, NUDIX family, domain containing protein, expressed K12613: mRNA-decapping enzyme subunit 2
11 Sobic.007G027700 expressed protein -
12 Sobic.004G257100 transmembrane 9 superfamily member, putative, expressed -
13 Sobic.001G291800 eukaryotic translation initiation factor 3 subunit B, putative, expressed K03253: translation initiation factor 3 subunit B
14 Sobic.006G208500 proteasome/cyclosome repeat containing protein, expressed K03032: PSMD1, 26S proteasome regulatory subunit N2
15 Sobic.006G077200 ubiquitin interaction motif-containing protein, putative, expressed -
16 Sobic.001G145400 threonyl-tRNA synthetase, mitochondrial precursor, putative, expressed K01868: TARS, threonyl-tRNA synthetase
17 Sobic.003G314700 expressed protein -
18 Sobic.002G020700 WD domain, G-beta repeat domain containing protein, expressed K14018: PLAA, DOA1, phospholipase A-2-activating protein
19 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
20 Sobic.003G240700 peptidase S8 and S53, subtilisin, kexin, sedolisin, putative, expressed -


Gene co-expression network
sample Sobic003G099300 Sobic003G099300 Sobic010G269100 Sobic010G269100 Sobic003G099300--Sobic010G269100 Sobic004G039600 Sobic004G039600 Sobic003G099300--Sobic004G039600 Sobic005G216300 Sobic005G216300 Sobic003G099300--Sobic005G216300 SobicK004100 SobicK004100 Sobic003G099300--SobicK004100 Sobic001G369000 Sobic001G369000 Sobic003G099300--Sobic001G369000 Sobic005G115500 Sobic005G115500 Sobic003G099300--Sobic005G115500 Sobic002G256200 Sobic002G256200 Sobic003G099300--Sobic002G256200 Sobic006G056200 Sobic006G056200 Sobic003G099300--Sobic006G056200 Sobic009G231700 Sobic009G231700 Sobic003G099300--Sobic009G231700 Sobic010G269100--Sobic003G099300 Sobic010G269100--Sobic002G256200 Sobic008G092300 Sobic008G092300 Sobic010G269100--Sobic008G092300 Sobic010G269100--Sobic006G056200 Sobic010G239800 Sobic010G239800 Sobic010G269100--Sobic010G239800 Sobic002G268400 Sobic002G268400 Sobic010G269100--Sobic002G268400 Sobic006G278700 Sobic006G278700 Sobic010G269100--Sobic006G278700 Sobic010G085200 Sobic010G085200 Sobic010G269100--Sobic010G085200 Sobic009G033900 Sobic009G033900 Sobic010G269100--Sobic009G033900 Sobic006G012500 Sobic006G012500 Sobic004G039600--Sobic006G012500 Sobic004G039600--Sobic001G369000 Sobic007G132100 Sobic007G132100 Sobic004G039600--Sobic007G132100 Sobic008G099800 Sobic008G099800 Sobic004G039600--Sobic008G099800 Sobic006G126100 Sobic006G126100 Sobic004G039600--Sobic006G126100 Sobic010G053800 Sobic010G053800 Sobic004G039600--Sobic010G053800 Sobic006G131000 Sobic006G131000 Sobic004G039600--Sobic006G131000 Sobic001G534800 Sobic001G534800 Sobic004G039600--Sobic001G534800 Sobic007G120500 Sobic007G120500 Sobic004G039600--Sobic007G120500 Sobic005G216300--Sobic003G099300 Sobic007G027700 Sobic007G027700 Sobic005G216300--Sobic007G027700 Sobic005G216300--Sobic004G039600 Sobic005G216300--Sobic001G369000 Sobic001G335900 Sobic001G335900 Sobic005G216300--Sobic001G335900 Sobic001G426600 Sobic001G426600 Sobic005G216300--Sobic001G426600 Sobic001G142100 Sobic001G142100 Sobic005G216300--Sobic001G142100 Sobic003G126600 Sobic003G126600 Sobic005G216300--Sobic003G126600 Sobic006G208500 Sobic006G208500 Sobic005G216300--Sobic006G208500 SobicK004100--Sobic001G369000 SobicK004100--Sobic004G039600 SobicK004100--Sobic003G099300 SobicK004100--Sobic001G335900 SobicK004100--Sobic007G120500 Sobic009G049400 Sobic009G049400 SobicK004100--Sobic009G049400 Sobic003G240700 Sobic003G240700 SobicK004100--Sobic003G240700 Sobic009G226400 Sobic009G226400 SobicK004100--Sobic009G226400 Sobic001G449900 Sobic001G449900 SobicK004100--Sobic001G449900 Sobic001G369000--Sobic004G039600 Sobic001G369000--Sobic001G335900 Sobic001G369000--Sobic007G120500 Sobic001G369000--Sobic003G240700 Sobic006G163800 Sobic006G163800 Sobic001G369000--Sobic006G163800 Sobic006G138000 Sobic006G138000 Sobic001G369000--Sobic006G138000 Sobic001G369000--Sobic009G049400 Sobic001G369000--Sobic001G426600 Sobic009G229600 Sobic009G229600 Sobic001G369000--Sobic009G229600 Sobic001G291800 Sobic001G291800 Sobic005G115500--Sobic001G291800 Sobic001G145400 Sobic001G145400 Sobic005G115500--Sobic001G145400 Sobic001G248100 Sobic001G248100 Sobic005G115500--Sobic001G248100 Sobic002G145800 Sobic002G145800 Sobic005G115500--Sobic002G145800 Sobic005G115500--Sobic003G099300 Sobic007G183300 Sobic007G183300 Sobic005G115500--Sobic007G183300 Sobic005G110499 Sobic005G110499 Sobic005G115500--Sobic005G110499 Sobic002G430300 Sobic002G430300 Sobic005G115500--Sobic002G430300 Sobic001G051700 Sobic001G051700 Sobic005G115500--Sobic001G051700 Sobic002G256200--Sobic010G269100 Sobic002G256200--Sobic003G099300 Sobic003G422900 Sobic003G422900 Sobic002G256200--Sobic003G422900 Sobic001G085100 Sobic001G085100 Sobic002G256200--Sobic001G085100 Sobic009G117500 Sobic009G117500 Sobic002G256200--Sobic009G117500 Sobic002G256200--Sobic002G268400 Sobic001G428800 Sobic001G428800 Sobic002G256200--Sobic001G428800 Sobic006G203100 Sobic006G203100 Sobic002G256200--Sobic006G203100 Sobic002G256200--Sobic006G056200 Sobic006G056200--Sobic004G039600 Sobic008G055900 Sobic008G055900 Sobic006G056200--Sobic008G055900 Sobic008G129600 Sobic008G129600 Sobic006G056200--Sobic008G129600 Sobic006G056200--Sobic003G099300 Sobic006G056200--Sobic009G226400 Sobic008G103300 Sobic008G103300 Sobic006G056200--Sobic008G103300 Sobic006G056200--Sobic001G369000 Sobic006G056200--SobicK004100 Sobic002G029300 Sobic002G029300 Sobic006G056200--Sobic002G029300 Sobic002G020700 Sobic002G020700 Sobic009G231700--Sobic002G020700 Sobic009G231700--Sobic003G099300 Sobic007G177300 Sobic007G177300 Sobic009G231700--Sobic007G177300 Sobic002G423500 Sobic002G423500 Sobic009G231700--Sobic002G423500 Sobic009G231700--SobicK004100 Sobic009G231700--Sobic004G039600 Sobic001G382600 Sobic001G382600 Sobic009G231700--Sobic001G382600 Sobic001G118200 Sobic001G118200 Sobic009G231700--Sobic001G118200 Sobic009G231700--Sobic010G269100
Octagon: transcription factors


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