Gene annotation
Transcriptome id Sobic.006G153900.1
Synonym Sb06g023125
Functional annotation transporter, major facilitator family, putative, expressed
UniProt C5YCH6
Pfam PF03137
Panther DB PTHR23505 PTHR23505:SF21
NCBI CDD KOG1330; Sugar transporter/spinster transmembrane protein
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT5G64500 : Major facilitator superfamily protein
RAP-DB (Rice) LOC_Os04g44430.1 : transporter, major facilitator family, putative, expressed
MaizeGDB (Corn) Zm00025a056543 , Zm00025a010598
Brachypodium KQJ83684 , KQJ83683 , PNT61519
Barley HORVU2Hr1G090610.4 , HORVU2Hr1G090610.5 , HORVU2Hr1G090610.6 , HORVU2Hr1G090610.7 , HORVU2Hr1G090610.1 , HORVU2Hr1G090610.2 , HORVU2Hr1G090610.3 , HORVU2Hr1G090610.8 , HORVU2Hr1G090610.9 , HORVU2Hr1G090610.14 , HORVU2Hr1G090610.12 , HORVU2Hr1G090610.13 , HORVU2Hr1G090610.10 , HORVU2Hr1G090610.11
Wheat TraesCS2B02G393000 , TraesCS2D02G372300 , TraesCS2D02G372300 , TraesCS2D02G372300 , TraesCS2A02G376200 , TraesCS2A02G376200 , TraesCS2A02G376200 , TraesCS2B02G393000
Populus -


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cDNA sequences
Sobic.006G153900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G498600 3-5 exonuclease family protein, putative, expressed K12591: RRP6, exosome complex exonuclease RRP6
2 Sobic.007G065100 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
3 Sobic.002G425700 ribonucleases P/MRP protein subunit POP1 containing protein, expressed K01164: ribonuclease P/MRP protein subunit POP1
4 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
5 Sobic.010G112000 expressed protein K17906: autophagy-related protein 2
6 Sobic.006G131500 serine/threonine-protein kinase GCN2, putative, expressed K16196: eukaryotic translation initiation factor 2-alpha kinase 4
7 Sobic.001G291000 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
8 Sobic.010G000600 BBF1 - 2 Bric-a-Brac, Tramtrack, Broad Complex BTB domains with a F5/8 type C discoidin domain, expressed -
9 Sobic.001G384900 hypothetical protein K09250: cellular nucleic acid-binding protein
10 Sobic.001G016600 FAR1 family protein, expressed -
11 Sobic.001G146800 expressed protein -
12 Sobic.009G178300 endonuclease/exonuclease/phosphatase family domain containing protein, expressed -
13 Sobic.002G164800 SET domain containing protein, expressed K11423: [histone H3]-dimethyl-L-lysine36 N-methyltransferase
14 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
15 Sobic.009G010600 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
16 Sobic.001G219900 expressed protein -
17 Sobic.007G161800 kinase, pfkB family, putative, expressed -
18 Sobic.002G380200 calmodulin-binding transcription activator, putative, expressed -
19 Sobic.004G213600 regulatory subunit, putative, expressed -
20 Sobic.002G260900 protein kinase domain containing protein, expressed K13429: chitin elicitor receptor kinase 1


Gene co-expression network
sample Sobic006G153900 Sobic006G153900 Sobic001G498600 Sobic001G498600 Sobic006G153900--Sobic001G498600 Sobic007G065100 Sobic007G065100 Sobic006G153900--Sobic007G065100 Sobic002G425700 Sobic002G425700 Sobic006G153900--Sobic002G425700 Sobic001G178700 Sobic001G178700 Sobic006G153900--Sobic001G178700 Sobic010G112000 Sobic010G112000 Sobic006G153900--Sobic010G112000 Sobic006G131500 Sobic006G131500 Sobic006G153900--Sobic006G131500 Sobic001G291000 Sobic001G291000 Sobic006G153900--Sobic001G291000 Sobic010G000600 Sobic010G000600 Sobic006G153900--Sobic010G000600 Sobic001G384900 Sobic001G384900 Sobic006G153900--Sobic001G384900 Sobic001G498600--Sobic010G112000 Sobic001G498600--Sobic006G131500 Sobic001G146800 Sobic001G146800 Sobic001G498600--Sobic001G146800 Sobic005G008800 Sobic005G008800 Sobic001G498600--Sobic005G008800 Sobic002G134200 Sobic002G134200 Sobic001G498600--Sobic002G134200 Sobic001G058700 Sobic001G058700 Sobic001G498600--Sobic001G058700 Sobic004G317100 Sobic004G317100 Sobic001G498600--Sobic004G317100 Sobic007G193700 Sobic007G193700 Sobic001G498600--Sobic007G193700 Sobic007G172400 Sobic007G172400 Sobic001G498600--Sobic007G172400 Sobic007G065100--Sobic002G425700 Sobic002G181300 Sobic002G181300 Sobic007G065100--Sobic002G181300 Sobic003G381200 Sobic003G381200 Sobic007G065100--Sobic003G381200 Sobic008G172300 Sobic008G172300 Sobic007G065100--Sobic008G172300 Sobic001G090500 Sobic001G090500 Sobic007G065100--Sobic001G090500 Sobic007G065100--Sobic001G498600 Sobic001G072500 Sobic001G072500 Sobic007G065100--Sobic001G072500 Sobic007G065100--Sobic006G153900 Sobic006G119400 Sobic006G119400 Sobic007G065100--Sobic006G119400 Sobic002G425700--Sobic007G065100 Sobic002G425700--Sobic006G153900 Sobic002G276100 Sobic002G276100 Sobic002G425700--Sobic002G276100 Sobic007G165600 Sobic007G165600 Sobic002G425700--Sobic007G165600 Sobic010G143800 Sobic010G143800 Sobic002G425700--Sobic010G143800 Sobic001G261501 Sobic001G261501 Sobic002G425700--Sobic001G261501 Sobic002G425700--Sobic001G498600 Sobic005G122700 Sobic005G122700 Sobic002G425700--Sobic005G122700 Sobic002G425700--Sobic001G090500 Sobic004G113400 Sobic004G113400 Sobic001G178700--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic001G178700--Sobic009G010600 Sobic001G248300 Sobic001G248300 Sobic001G178700--Sobic001G248300 Sobic001G178700--Sobic001G291000 Sobic001G474600 Sobic001G474600 Sobic001G178700--Sobic001G474600 Sobic001G178700--Sobic001G146800 Sobic001G178700--Sobic010G112000 Sobic001G178700--Sobic007G172400 Sobic004G329400 Sobic004G329400 Sobic001G178700--Sobic004G329400 Sobic010G112000--Sobic001G498600 Sobic004G034900 Sobic004G034900 Sobic010G112000--Sobic004G034900 Sobic002G008900 Sobic002G008900 Sobic010G112000--Sobic002G008900 Sobic001G540400 Sobic001G540400 Sobic010G112000--Sobic001G540400 Sobic001G289600 Sobic001G289600 Sobic010G112000--Sobic001G289600 Sobic010G112000--Sobic001G146800 Sobic010G112000--Sobic005G008800 Sobic001G280900 Sobic001G280900 Sobic010G112000--Sobic001G280900 Sobic010G112000--Sobic001G058700 Sobic006G131500--Sobic005G008800 Sobic006G131500--Sobic001G498600 Sobic004G209600 Sobic004G209600 Sobic006G131500--Sobic004G209600 Sobic003G280800 Sobic003G280800 Sobic006G131500--Sobic003G280800 Sobic006G216800 Sobic006G216800 Sobic006G131500--Sobic006G216800 Sobic001G241200 Sobic001G241200 Sobic006G131500--Sobic001G241200 Sobic006G131500--Sobic002G134200 Sobic006G131500--Sobic001G146800 Sobic006G131500--Sobic001G072500 Sobic001G291000--Sobic001G178700 Sobic001G291000--Sobic004G113400 Sobic001G291000--Sobic009G010600 Sobic006G280200 Sobic006G280200 Sobic001G291000--Sobic006G280200 Sobic010G276900 Sobic010G276900 Sobic001G291000--Sobic010G276900 Sobic003G408600 Sobic003G408600 Sobic001G291000--Sobic003G408600 Sobic004G005100 Sobic004G005100 Sobic001G291000--Sobic004G005100 Sobic001G291000--Sobic001G280900 Sobic006G055200 Sobic006G055200 Sobic001G291000--Sobic006G055200 Sobic004G131040 Sobic004G131040 Sobic010G000600--Sobic004G131040 Sobic007G110200 Sobic007G110200 Sobic010G000600--Sobic007G110200 Sobic010G000600--Sobic006G153900 Sobic001G300100 Sobic001G300100 Sobic010G000600--Sobic001G300100 Sobic009G193500 Sobic009G193500 Sobic010G000600--Sobic009G193500 Sobic004G210900 Sobic004G210900 Sobic010G000600--Sobic004G210900 Sobic010G000600--Sobic003G381200 Sobic010G000600--Sobic002G276100 Sobic010G000600--Sobic002G181300 Sobic010G005600 Sobic010G005600 Sobic001G384900--Sobic010G005600 Sobic005G106500 Sobic005G106500 Sobic001G384900--Sobic005G106500 Sobic009G050900 Sobic009G050900 Sobic001G384900--Sobic009G050900 Sobic001G384900--Sobic006G153900 Sobic002G351900 Sobic002G351900 Sobic001G384900--Sobic002G351900 Sobic008G166300 Sobic008G166300 Sobic001G384900--Sobic008G166300 Sobic001G081000 Sobic001G081000 Sobic001G384900--Sobic001G081000 Sobic004G018300 Sobic004G018300 Sobic001G384900--Sobic004G018300 Sobic009G178300 Sobic009G178300 Sobic001G384900--Sobic009G178300
Octagon: transcription factors


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