Gene annotation
Transcriptome id Sobic.001G291000.1,Sobic.001G291000.2
Synonym Sb01g028490, RPS3, RPM1
Functional annotation disease resistance protein RPM1, putative, expressed
UniProt C5WRD7
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF621
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os10g07534.1 : disease resistance protein RPM1, putative, expressed
MaizeGDB (Corn) Zm00025a003452
Brachypodium -
Barley HORVU2Hr1G038230.18 , HORVU2Hr1G038230.12 , HORVU2Hr1G038230.10 , HORVU2Hr1G038230.11 , HORVU2Hr1G038230.16 , HORVU2Hr1G038230.17 , HORVU2Hr1G038230.14 , HORVU2Hr1G038230.15 , HORVU2Hr1G038230.2 , HORVU2Hr1G038230.3 , HORVU2Hr1G038230.9 , HORVU2Hr1G038230.1 , HORVU2Hr1G038230.4 , HORVU2Hr1G038230.5 , HORVU2Hr1G038230.6 , HORVU2Hr1G038230.7 , HORVU2Hr1G038230.8
Wheat TraesCS2A02G197500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G178700 NBS-LRR disease resistance protein, putative, expressed -
2 Sobic.004G113400 cyclic nucleotide-gated ion channel 1, putative, expressed K05391: cyclic nucleotide gated channel, plant
3 Sobic.009G010600 retinoblastoma-related protein-like, putative, expressed K04681: retinoblastoma-like protein 1
4 Sobic.006G280200 PHD finger family protein, putative, expressed -
5 Sobic.010G276900 - -
6 Sobic.003G408600 GYF domain containing protein, putative, expressed K18730: PERQ amino acid-rich with GYF domain-containing protein
7 Sobic.004G005100 peptidase family C78 domain containing protein, expressed -
8 Sobic.001G280900 expressed protein -
9 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
10 Sobic.001G016600 FAR1 family protein, expressed -
11 Sobic.003G225700 - -
12 Sobic.001G000200 TBC domain containing protein, expressed -
13 Sobic.001G071400 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
14 Sobic.009G047200 protein kinase domain containing protein, expressed -
15 Sobic.002G397500 SAC3/GANP family protein, expressed -
16 Sobic.001G058700 XRN 5\'-3\' exonuclease N-terminus domain containing protein, expressed K12619: XRN2, 5'-3' exoribonuclease 2
17 Sobic.001G248300 OsPOP21 - Putative Prolyl Oligopeptidase homologue, expressed K01303: acylaminoacyl-peptidase
18 Sobic.007G157000 protein transport protein, putative, expressed K14006: protein transport protein SEC23
19 Sobic.003G141500 CGMC_GSK.3 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K03083: glycogen synthase kinase 3 beta
20 Sobic.002G299700 ATGRIP/GRIP, putative, expressed -


Gene co-expression network
sample Sobic001G291000 Sobic001G291000 Sobic001G178700 Sobic001G178700 Sobic001G291000--Sobic001G178700 Sobic004G113400 Sobic004G113400 Sobic001G291000--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic001G291000--Sobic009G010600 Sobic006G280200 Sobic006G280200 Sobic001G291000--Sobic006G280200 Sobic010G276900 Sobic010G276900 Sobic001G291000--Sobic010G276900 Sobic003G408600 Sobic003G408600 Sobic001G291000--Sobic003G408600 Sobic004G005100 Sobic004G005100 Sobic001G291000--Sobic004G005100 Sobic001G280900 Sobic001G280900 Sobic001G291000--Sobic001G280900 Sobic006G055200 Sobic006G055200 Sobic001G291000--Sobic006G055200 Sobic001G178700--Sobic004G113400 Sobic001G178700--Sobic009G010600 Sobic001G248300 Sobic001G248300 Sobic001G178700--Sobic001G248300 Sobic001G178700--Sobic001G291000 Sobic001G474600 Sobic001G474600 Sobic001G178700--Sobic001G474600 Sobic001G146800 Sobic001G146800 Sobic001G178700--Sobic001G146800 Sobic010G112000 Sobic010G112000 Sobic001G178700--Sobic010G112000 Sobic007G172400 Sobic007G172400 Sobic001G178700--Sobic007G172400 Sobic004G329400 Sobic004G329400 Sobic001G178700--Sobic004G329400 Sobic004G113400--Sobic009G010600 Sobic004G113400--Sobic003G408600 Sobic004G113400--Sobic004G329400 Sobic001G058700 Sobic001G058700 Sobic004G113400--Sobic001G058700 Sobic008G099800 Sobic008G099800 Sobic004G113400--Sobic008G099800 Sobic004G113400--Sobic001G178700 Sobic001G117200 Sobic001G117200 Sobic004G113400--Sobic001G117200 Sobic001G534800 Sobic001G534800 Sobic004G113400--Sobic001G534800 Sobic002G430000 Sobic002G430000 Sobic004G113400--Sobic002G430000 Sobic009G010600--Sobic004G113400 Sobic009G010600--Sobic001G474600 Sobic009G010600--Sobic001G178700 Sobic009G010600--Sobic001G058700 Sobic001G281100 Sobic001G281100 Sobic009G010600--Sobic001G281100 Sobic004G355000 Sobic004G355000 Sobic009G010600--Sobic004G355000 Sobic009G010600--Sobic004G329400 Sobic002G427050 Sobic002G427050 Sobic009G010600--Sobic002G427050 Sobic005G026200 Sobic005G026200 Sobic009G010600--Sobic005G026200 Sobic006G280200--Sobic001G291000 Sobic010G148932 Sobic010G148932 Sobic006G280200--Sobic010G148932 Sobic003G312100 Sobic003G312100 Sobic006G280200--Sobic003G312100 Sobic007G098500 Sobic007G098500 Sobic006G280200--Sobic007G098500 Sobic006G280200--Sobic001G280900 Sobic003G186000 Sobic003G186000 Sobic006G280200--Sobic003G186000 Sobic002G397500 Sobic002G397500 Sobic006G280200--Sobic002G397500 Sobic009G166100 Sobic009G166100 Sobic006G280200--Sobic009G166100 Sobic008G132000 Sobic008G132000 Sobic006G280200--Sobic008G132000 Sobic004G351100 Sobic004G351100 Sobic010G276900--Sobic004G351100 Sobic010G276900--Sobic001G291000 Sobic001G091400 Sobic001G091400 Sobic010G276900--Sobic001G091400 Sobic007G207000 Sobic007G207000 Sobic010G276900--Sobic007G207000 Sobic010G118950 Sobic010G118950 Sobic010G276900--Sobic010G118950 Sobic002G299700 Sobic002G299700 Sobic010G276900--Sobic002G299700 Sobic002G275600 Sobic002G275600 Sobic010G276900--Sobic002G275600 Sobic010G276900--Sobic009G010600 Sobic010G276900--Sobic001G474600 Sobic001G540400 Sobic001G540400 Sobic003G408600--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic003G408600--Sobic005G008800 Sobic003G408600--Sobic002G397500 Sobic005G112300 Sobic005G112300 Sobic003G408600--Sobic005G112300 Sobic007G163100 Sobic007G163100 Sobic003G408600--Sobic007G163100 Sobic010G112100 Sobic010G112100 Sobic003G408600--Sobic010G112100 Sobic003G408600--Sobic001G058700 Sobic002G071500 Sobic002G071500 Sobic003G408600--Sobic002G071500 Sobic002G045600 Sobic002G045600 Sobic003G408600--Sobic002G045600 Sobic004G005100--Sobic003G312100 Sobic010G080700 Sobic010G080700 Sobic004G005100--Sobic010G080700 Sobic004G005100--Sobic001G291000 Sobic006G040500 Sobic006G040500 Sobic004G005100--Sobic006G040500 Sobic008G088872 Sobic008G088872 Sobic004G005100--Sobic008G088872 Sobic004G005100--Sobic010G148932 Sobic004G135400 Sobic004G135400 Sobic004G005100--Sobic004G135400 Sobic010G034000 Sobic010G034000 Sobic004G005100--Sobic010G034000 Sobic004G248600 Sobic004G248600 Sobic004G005100--Sobic004G248600 Sobic001G280900--Sobic001G540400 Sobic001G280900--Sobic005G112300 Sobic001G280900--Sobic002G397500 Sobic001G280900--Sobic003G408600 Sobic009G109200 Sobic009G109200 Sobic001G280900--Sobic009G109200 Sobic001G280900--Sobic005G008800 Sobic007G062800 Sobic007G062800 Sobic001G280900--Sobic007G062800 Sobic001G280900--Sobic001G058700 Sobic001G050600 Sobic001G050600 Sobic001G280900--Sobic001G050600 Sobic001G194200 Sobic001G194200 Sobic006G055200--Sobic001G194200 Sobic010G010700 Sobic010G010700 Sobic006G055200--Sobic010G010700 Sobic005G001000 Sobic005G001000 Sobic006G055200--Sobic005G001000 Sobic004G276400 Sobic004G276400 Sobic006G055200--Sobic004G276400 Sobic004G291900 Sobic004G291900 Sobic006G055200--Sobic004G291900 Sobic006G055200--Sobic003G186000 Sobic001G289800 Sobic001G289800 Sobic006G055200--Sobic001G289800 Sobic004G263600 Sobic004G263600 Sobic006G055200--Sobic004G263600 Sobic001G002000 Sobic001G002000 Sobic006G055200--Sobic001G002000
Octagon: transcription factors


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