Gene annotation
Transcriptome id Sobic.006G280200.4,Sobic.006G280200.5,Sobic.006G280200.6
Synonym Sb06g034065
Functional annotation PHD finger family protein, putative, expressed
UniProt A0A1Z5RGZ9 , A0A1Z5RFX1 , A0A1Z5RGT9
Pfam PF00628 PF16135
Panther DB PTHR24098 PTHR24098:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0004402histone acetyltransferase activity


Orthologs (automatic annotation)
TAIR AT3G14980 : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger protein
RAP-DB (Rice) LOC_Os04g59510.1,LOC_Os04g35430.1 : PHD-finger domain containing protein, expressed,PHD finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a039630 , Zm00025a057501
Brachypodium KQJ85506 , KQJ85507 , PNT62237
Barley HORVU2Hr1G126690.8 , HORVU2Hr1G126690.9 , HORVU2Hr1G126690.3 , HORVU2Hr1G126690.1 , HORVU2Hr1G126690.6 , HORVU2Hr1G126690.7 , HORVU2Hr1G126690.5 , HORVU2Hr1G126690.4 , HORVU2Hr1G126690.2
Wheat TraesCS2B02G622700 , TraesCS2B02G622700 , TraesCS2B02G622700 , TraesCS2A02G563500 , TraesCS2A02G563500 , TraesCS2B02G622700 , TraesCS2D02G571900 , TraesCS2D02G571900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G291000 disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
2 Sobic.010G148932 - -
3 Sobic.003G312100 guanine nucleotide exchange family protein, putative, expressed -
4 Sobic.007G098500 BIG, putative, expressed K10691: UBR4, E3 ubiquitin-protein ligase UBR4
5 Sobic.001G280900 expressed protein -
6 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
7 Sobic.002G397500 SAC3/GANP family protein, expressed -
8 Sobic.009G166100 PWWP domain containing protein, expressed -
9 Sobic.008G132000 RGH1A, putative, expressed -
10 Sobic.002G391600 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K12854: SNRNP200, pre-mRNA-splicing helicase BRR2
11 Sobic.007G077900 zinc finger domain, LSD1 subclass family protein, expressed -
12 Sobic.001G352900 intron-binding protein aquarius, putative, expressed K12874: intron-binding protein aquarius
13 Sobic.001G540400 expressed protein -
14 Sobic.007G062800 SET domain containing protein, expressed -
15 Sobic.008G016300 expressed protein -
16 Sobic.001G016600 FAR1 family protein, expressed -
17 Sobic.010G105200 SYD, putative, expressed -
18 Sobic.002G396500 FAT domain-containing protein, putative, expressed K08874: transformation/transcription domain-associated protein
19 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
20 Sobic.010G010700 PHD-finger family protein, expressed -


Gene co-expression network
sample Sobic006G280200 Sobic006G280200 Sobic001G291000 Sobic001G291000 Sobic006G280200--Sobic001G291000 Sobic010G148932 Sobic010G148932 Sobic006G280200--Sobic010G148932 Sobic003G312100 Sobic003G312100 Sobic006G280200--Sobic003G312100 Sobic007G098500 Sobic007G098500 Sobic006G280200--Sobic007G098500 Sobic001G280900 Sobic001G280900 Sobic006G280200--Sobic001G280900 Sobic003G186000 Sobic003G186000 Sobic006G280200--Sobic003G186000 Sobic002G397500 Sobic002G397500 Sobic006G280200--Sobic002G397500 Sobic009G166100 Sobic009G166100 Sobic006G280200--Sobic009G166100 Sobic008G132000 Sobic008G132000 Sobic006G280200--Sobic008G132000 Sobic001G178700 Sobic001G178700 Sobic001G291000--Sobic001G178700 Sobic004G113400 Sobic004G113400 Sobic001G291000--Sobic004G113400 Sobic009G010600 Sobic009G010600 Sobic001G291000--Sobic009G010600 Sobic001G291000--Sobic006G280200 Sobic010G276900 Sobic010G276900 Sobic001G291000--Sobic010G276900 Sobic003G408600 Sobic003G408600 Sobic001G291000--Sobic003G408600 Sobic004G005100 Sobic004G005100 Sobic001G291000--Sobic004G005100 Sobic001G291000--Sobic001G280900 Sobic006G055200 Sobic006G055200 Sobic001G291000--Sobic006G055200 Sobic010G148932--Sobic003G312100 Sobic002G042600 Sobic002G042600 Sobic010G148932--Sobic002G042600 Sobic003G229500 Sobic003G229500 Sobic010G148932--Sobic003G229500 Sobic010G148932--Sobic002G397500 Sobic008G098900 Sobic008G098900 Sobic010G148932--Sobic008G098900 Sobic001G117200 Sobic001G117200 Sobic010G148932--Sobic001G117200 Sobic001G137000 Sobic001G137000 Sobic010G148932--Sobic001G137000 Sobic007G062800 Sobic007G062800 Sobic010G148932--Sobic007G062800 Sobic001G457900 Sobic001G457900 Sobic010G148932--Sobic001G457900 Sobic003G312100--Sobic010G148932 Sobic003G233400 Sobic003G233400 Sobic003G312100--Sobic003G233400 Sobic003G312100--Sobic001G137000 Sobic007G019300 Sobic007G019300 Sobic003G312100--Sobic007G019300 Sobic003G072200 Sobic003G072200 Sobic003G312100--Sobic003G072200 Sobic003G312100--Sobic002G397500 Sobic001G004400 Sobic001G004400 Sobic003G312100--Sobic001G004400 Sobic004G248600 Sobic004G248600 Sobic003G312100--Sobic004G248600 Sobic002G396500 Sobic002G396500 Sobic003G312100--Sobic002G396500 Sobic008G092600 Sobic008G092600 Sobic007G098500--Sobic008G092600 Sobic007G098500--Sobic002G396500 Sobic010G105200 Sobic010G105200 Sobic007G098500--Sobic010G105200 Sobic007G098500--Sobic003G072200 Sobic001G050600 Sobic001G050600 Sobic007G098500--Sobic001G050600 Sobic007G098500--Sobic001G137000 Sobic007G098500--Sobic003G233400 Sobic001G287500 Sobic001G287500 Sobic007G098500--Sobic001G287500 Sobic006G265200 Sobic006G265200 Sobic007G098500--Sobic006G265200 Sobic001G540400 Sobic001G540400 Sobic001G280900--Sobic001G540400 Sobic005G112300 Sobic005G112300 Sobic001G280900--Sobic005G112300 Sobic001G280900--Sobic002G397500 Sobic001G280900--Sobic003G408600 Sobic009G109200 Sobic009G109200 Sobic001G280900--Sobic009G109200 Sobic005G008800 Sobic005G008800 Sobic001G280900--Sobic005G008800 Sobic001G280900--Sobic007G062800 Sobic001G058700 Sobic001G058700 Sobic001G280900--Sobic001G058700 Sobic001G280900--Sobic001G050600 Sobic004G276400 Sobic004G276400 Sobic003G186000--Sobic004G276400 Sobic003G186000--Sobic010G105200 Sobic010G010700 Sobic010G010700 Sobic003G186000--Sobic010G010700 Sobic005G001000 Sobic005G001000 Sobic003G186000--Sobic005G001000 Sobic003G205200 Sobic003G205200 Sobic003G186000--Sobic003G205200 Sobic001G194200 Sobic001G194200 Sobic003G186000--Sobic001G194200 Sobic003G186000--Sobic007G062800 Sobic008G001200 Sobic008G001200 Sobic003G186000--Sobic008G001200 Sobic007G103100 Sobic007G103100 Sobic003G186000--Sobic007G103100 Sobic002G397500--Sobic003G408600 Sobic002G397500--Sobic007G062800 Sobic002G397500--Sobic005G112300 Sobic002G397500--Sobic001G540400 Sobic002G397500--Sobic009G109200 Sobic002G397500--Sobic003G072200 Sobic004G242400 Sobic004G242400 Sobic002G397500--Sobic004G242400 Sobic002G397500--Sobic004G276400 Sobic010G112100 Sobic010G112100 Sobic002G397500--Sobic010G112100 Sobic003G293200 Sobic003G293200 Sobic009G166100--Sobic003G293200 Sobic004G009600 Sobic004G009600 Sobic009G166100--Sobic004G009600 Sobic007G031600 Sobic007G031600 Sobic009G166100--Sobic007G031600 Sobic010G001100 Sobic010G001100 Sobic009G166100--Sobic010G001100 Sobic001G542700 Sobic001G542700 Sobic009G166100--Sobic001G542700 Sobic001G111600 Sobic001G111600 Sobic009G166100--Sobic001G111600 Sobic007G117400 Sobic007G117400 Sobic009G166100--Sobic007G117400 Sobic010G069100 Sobic010G069100 Sobic009G166100--Sobic010G069100 Sobic010G065300 Sobic010G065300 Sobic009G166100--Sobic010G065300 Sobic005G191900 Sobic005G191900 Sobic008G132000--Sobic005G191900 Sobic009G142000 Sobic009G142000 Sobic008G132000--Sobic009G142000 Sobic003G294600 Sobic003G294600 Sobic008G132000--Sobic003G294600 Sobic008G132000--Sobic006G280200 Sobic008G132000--Sobic001G291000 Sobic001G453000 Sobic001G453000 Sobic008G132000--Sobic001G453000 Sobic003G445500 Sobic003G445500 Sobic008G132000--Sobic003G445500 Sobic007G077900 Sobic007G077900 Sobic008G132000--Sobic007G077900 Sobic006G210000 Sobic006G210000 Sobic008G132000--Sobic006G210000
Octagon: transcription factors


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