Gene annotation
Transcriptome id Sobic.008G016300.1
Synonym Sb08g001435, FRS5
Functional annotation expressed protein
UniProt C5YQM0
Pfam PF04434 PF03101 PF10551
Panther DB PTHR31669 PTHR31669:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0006355regulation of transcription, DNA-templated


Orthologs (automatic annotation)
TAIR AT4G38180 : FAR1-related sequence 5
RAP-DB (Rice) LOC_Os12g12380.1 : transposon protein, putative, unclassified, expressed
MaizeGDB (Corn) -
Brachypodium KQJ91830
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G316600 expressed protein -
2 Sobic.002G391600 U5 small nuclear ribonucleoprotein 200 kDa helicase, putative, expressed K12854: SNRNP200, pre-mRNA-splicing helicase BRR2
3 Sobic.010G010700 PHD-finger family protein, expressed -
4 Sobic.009G256300 DNA binding protein, putative, expressed -
5 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
6 Sobic.009G109200 phosphatidylinositol kinase, putative, expressed K07203: MTOR, FRAP, serine/threonine-protein kinase mTOR
7 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1
8 Sobic.004G034900 histone acetyltransferase HAC1, putative, expressed K04498: EP300, CREBBP, E1A/CREB-binding protein
9 Sobic.007G103100 SWP, putative, expressed K15156: MED14, mediator of RNA polymerase II transcription subunit 14
10 Sobic.010G105200 SYD, putative, expressed -
11 Sobic.005G008800 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR
12 Sobic.010G112000 expressed protein K17906: autophagy-related protein 2
13 Sobic.004G276400 expressed protein K11320: E1A-binding protein p400
14 Sobic.003G186000 WD domain, G-beta repeat domain containing protein, expressed -
15 Sobic.001G289600 BAH domain containing protein, putative, expressed -
16 Sobic.001G289800 BAH domain containing protein, putative, expressed -
17 Sobic.001G194200 diacylglycerol kinase, putative, expressed -
18 Sobic.003G389200 Rad21 / Rec8 like protein, putative, expressed K06670: SCC1, MCD1, cohesin complex subunit SCC1
19 Sobic.001G540400 expressed protein -
20 Sobic.004G209600 SWIM zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic008G016300 Sobic008G016300 Sobic002G316600 Sobic002G316600 Sobic008G016300--Sobic002G316600 Sobic002G391600 Sobic002G391600 Sobic008G016300--Sobic002G391600 Sobic010G010700 Sobic010G010700 Sobic008G016300--Sobic010G010700 Sobic009G256300 Sobic009G256300 Sobic008G016300--Sobic009G256300 Sobic006G055200 Sobic006G055200 Sobic008G016300--Sobic006G055200 Sobic009G109200 Sobic009G109200 Sobic008G016300--Sobic009G109200 Sobic010G206900 Sobic010G206900 Sobic008G016300--Sobic010G206900 Sobic004G034900 Sobic004G034900 Sobic008G016300--Sobic004G034900 Sobic007G103100 Sobic007G103100 Sobic008G016300--Sobic007G103100 Sobic002G316600--Sobic007G103100 Sobic001G527800 Sobic001G527800 Sobic002G316600--Sobic001G527800 Sobic003G186000 Sobic003G186000 Sobic002G316600--Sobic003G186000 Sobic004G276400 Sobic004G276400 Sobic002G316600--Sobic004G276400 Sobic001G529600 Sobic001G529600 Sobic002G316600--Sobic001G529600 Sobic003G166750 Sobic003G166750 Sobic002G316600--Sobic003G166750 Sobic001G194200 Sobic001G194200 Sobic002G316600--Sobic001G194200 Sobic001G289800 Sobic001G289800 Sobic002G316600--Sobic001G289800 Sobic010G079500 Sobic010G079500 Sobic002G316600--Sobic010G079500 Sobic010G053600 Sobic010G053600 Sobic002G391600--Sobic010G053600 Sobic001G352900 Sobic001G352900 Sobic002G391600--Sobic001G352900 Sobic002G391600--Sobic008G016300 Sobic004G242400 Sobic004G242400 Sobic002G391600--Sobic004G242400 Sobic002G391600--Sobic009G256300 Sobic010G105200 Sobic010G105200 Sobic002G391600--Sobic010G105200 Sobic002G391600--Sobic009G109200 Sobic002G391600--Sobic010G010700 Sobic002G133300 Sobic002G133300 Sobic002G391600--Sobic002G133300 Sobic010G010700--Sobic010G206900 Sobic010G010700--Sobic004G034900 Sobic010G010700--Sobic004G276400 Sobic010G010700--Sobic001G194200 Sobic007G062800 Sobic007G062800 Sobic010G010700--Sobic007G062800 Sobic002G008900 Sobic002G008900 Sobic010G010700--Sobic002G008900 Sobic005G112300 Sobic005G112300 Sobic010G010700--Sobic005G112300 Sobic008G001200 Sobic008G001200 Sobic010G010700--Sobic008G001200 Sobic010G010700--Sobic003G186000 Sobic010G112100 Sobic010G112100 Sobic009G256300--Sobic010G112100 Sobic003G389200 Sobic003G389200 Sobic009G256300--Sobic003G389200 Sobic009G256300--Sobic004G242400 Sobic009G256300--Sobic010G010700 Sobic010G123600 Sobic010G123600 Sobic009G256300--Sobic010G123600 Sobic003G360400 Sobic003G360400 Sobic009G256300--Sobic003G360400 Sobic009G256300--Sobic009G109200 Sobic009G256300--Sobic004G276400 Sobic001G542400 Sobic001G542400 Sobic009G256300--Sobic001G542400 Sobic006G055200--Sobic001G194200 Sobic006G055200--Sobic010G010700 Sobic005G001000 Sobic005G001000 Sobic006G055200--Sobic005G001000 Sobic006G055200--Sobic004G276400 Sobic004G291900 Sobic004G291900 Sobic006G055200--Sobic004G291900 Sobic006G055200--Sobic003G186000 Sobic006G055200--Sobic001G289800 Sobic004G263600 Sobic004G263600 Sobic006G055200--Sobic004G263600 Sobic001G002000 Sobic001G002000 Sobic006G055200--Sobic001G002000 Sobic009G109200--Sobic010G105200 Sobic009G109200--Sobic004G242400 Sobic002G397500 Sobic002G397500 Sobic009G109200--Sobic002G397500 Sobic009G109200--Sobic001G542400 Sobic001G540400 Sobic001G540400 Sobic009G109200--Sobic001G540400 Sobic005G008800 Sobic005G008800 Sobic009G109200--Sobic005G008800 Sobic009G109200--Sobic004G276400 Sobic003G408600 Sobic003G408600 Sobic009G109200--Sobic003G408600 Sobic009G109200--Sobic010G112100 Sobic010G206900--Sobic010G010700 Sobic001G365900 Sobic001G365900 Sobic010G206900--Sobic001G365900 Sobic010G206900--Sobic004G034900 Sobic001G534700 Sobic001G534700 Sobic010G206900--Sobic001G534700 Sobic010G247800 Sobic010G247800 Sobic010G206900--Sobic010G247800 Sobic002G411600 Sobic002G411600 Sobic010G206900--Sobic002G411600 Sobic010G206900--Sobic008G001200 Sobic003G196300 Sobic003G196300 Sobic010G206900--Sobic003G196300 Sobic009G165700 Sobic009G165700 Sobic010G206900--Sobic009G165700 Sobic001G289600 Sobic001G289600 Sobic004G034900--Sobic001G289600 Sobic004G034900--Sobic010G206900 Sobic004G034900--Sobic010G010700 Sobic004G034900--Sobic002G411600 Sobic004G034900--Sobic001G540400 Sobic003G422500 Sobic003G422500 Sobic004G034900--Sobic003G422500 Sobic004G034900--Sobic004G276400 Sobic004G034900--Sobic002G008900 Sobic004G034900--Sobic007G062800 Sobic007G103100--Sobic002G316600 Sobic007G103100--Sobic003G186000 Sobic007G103100--Sobic001G194200 Sobic007G103100--Sobic004G291900 Sobic007G103100--Sobic004G276400 Sobic007G103100--Sobic001G527800 Sobic003G205200 Sobic003G205200 Sobic007G103100--Sobic003G205200 Sobic002G275700 Sobic002G275700 Sobic007G103100--Sobic002G275700 Sobic007G103100--Sobic006G055200
Octagon: transcription factors


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