Gene annotation
Transcriptome id Sobic.004G359800.1
Synonym Sb04g038651, VTC4
Functional annotation inositol-1-monophosphatase, putative, expressed
UniProt A0A194YTD5 , A0A109NDM5
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G02870 : Inositol monophosphatase family protein
RAP-DB (Rice) LOC_Os03g39000.1 : inositol-1-monophosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a007135
Brachypodium KQK14310 , KQK14311
Barley HORVU4Hr1G034300.8 , HORVU4Hr1G034300.9 , HORVU4Hr1G034300.6 , HORVU4Hr1G034300.7 , HORVU4Hr1G034300.4 , HORVU4Hr1G034300.2 , HORVU4Hr1G034300.3
Wheat TraesCS4B02G161300 , TraesCS4A02G163700 , TraesCS4D02G151200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G116200 expressed protein K13217: PRPF39, pre-mRNA-processing factor 39
2 Sobic.002G169633 - -
3 Sobic.003G138500 aspartic proteinase oryzasin-1 precursor, putative, expressed K08245: phytepsin
4 Sobic.002G134200 WD domain, G-beta repeat domain containing protein, expressed K11293: HIRA, protein HIRA/HIR1
5 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
6 Sobic.010G139000 surp module family protein, putative, expressed K13123: G patch domain-containing protein 1
7 Sobic.006G182900 expressed protein -
8 Sobic.010G176550 - -
9 Sobic.002G127550 - -
10 Sobic.002G031400 OsFBL39 - F-box domain and LRR containing protein, expressed -
11 Sobic.005G110200 - -
12 Sobic.004G208900 RNA-binding protein Luc7-like, putative, expressed -
13 Sobic.004G209600 SWIM zinc finger family protein, putative, expressed -
14 Sobic.010G256700 MATE efflux family protein, putative, expressed K03327: TC.MATE, SLC47A, norM, mdtK, multidrug resistance protein, MATE family
15 Sobic.004G314000 expressed protein -
16 Sobic.006G209850 - -
17 Sobic.006G216800 AAA family ATPase, putative, expressed K13339: PEX6, peroxin-6
18 Sobic.001G072500 expressed protein K12879: THO complex subunit 2
19 Sobic.003G106200 expressed protein K13144: integrator complex subunit 7
20 Sobic.004G263600 - K03655: ATP-dependent DNA helicase RecG


Gene co-expression network
sample Sobic004G359800 Sobic004G359800 Sobic007G116200 Sobic007G116200 Sobic004G359800--Sobic007G116200 Sobic002G169633 Sobic002G169633 Sobic004G359800--Sobic002G169633 Sobic003G138500 Sobic003G138500 Sobic004G359800--Sobic003G138500 Sobic002G134200 Sobic002G134200 Sobic004G359800--Sobic002G134200 Sobic003G280800 Sobic003G280800 Sobic004G359800--Sobic003G280800 Sobic010G139000 Sobic010G139000 Sobic004G359800--Sobic010G139000 Sobic006G182900 Sobic006G182900 Sobic004G359800--Sobic006G182900 Sobic010G176550 Sobic010G176550 Sobic004G359800--Sobic010G176550 Sobic002G127550 Sobic002G127550 Sobic004G359800--Sobic002G127550 Sobic006G216800 Sobic006G216800 Sobic007G116200--Sobic006G216800 Sobic010G010700 Sobic010G010700 Sobic007G116200--Sobic010G010700 Sobic007G116200--Sobic002G134200 Sobic007G116200--Sobic006G182900 Sobic007G116200--Sobic004G359800 Sobic007G116200--Sobic010G139000 Sobic010G256700 Sobic010G256700 Sobic007G116200--Sobic010G256700 Sobic004G209600 Sobic004G209600 Sobic007G116200--Sobic004G209600 Sobic007G116200--Sobic003G280800 Sobic001G072500 Sobic001G072500 Sobic002G169633--Sobic001G072500 Sobic005G032800 Sobic005G032800 Sobic002G169633--Sobic005G032800 Sobic002G169633--Sobic004G359800 Sobic004G263600 Sobic004G263600 Sobic002G169633--Sobic004G263600 Sobic004G174200 Sobic004G174200 Sobic002G169633--Sobic004G174200 Sobic010G239600 Sobic010G239600 Sobic002G169633--Sobic010G239600 Sobic007G020500 Sobic007G020500 Sobic002G169633--Sobic007G020500 Sobic006G131500 Sobic006G131500 Sobic002G169633--Sobic006G131500 Sobic007G193700 Sobic007G193700 Sobic002G169633--Sobic007G193700 Sobic003G138500--Sobic002G127550 Sobic001G159400 Sobic001G159400 Sobic003G138500--Sobic001G159400 Sobic004G034800 Sobic004G034800 Sobic003G138500--Sobic004G034800 Sobic003G138500--Sobic004G359800 Sobic003G138500--Sobic010G176550 Sobic003G138500--Sobic007G116200 Sobic002G276100 Sobic002G276100 Sobic003G138500--Sobic002G276100 Sobic003G381200 Sobic003G381200 Sobic003G138500--Sobic003G381200 Sobic001G186800 Sobic001G186800 Sobic003G138500--Sobic001G186800 Sobic001G071400 Sobic001G071400 Sobic002G134200--Sobic001G071400 Sobic002G309600 Sobic002G309600 Sobic002G134200--Sobic002G309600 Sobic002G134200--Sobic003G280800 Sobic002G134200--Sobic006G216800 Sobic002G133400 Sobic002G133400 Sobic002G134200--Sobic002G133400 Sobic008G047800 Sobic008G047800 Sobic002G134200--Sobic008G047800 Sobic005G008800 Sobic005G008800 Sobic002G134200--Sobic005G008800 Sobic009G191000 Sobic009G191000 Sobic002G134200--Sobic009G191000 Sobic002G008900 Sobic002G008900 Sobic002G134200--Sobic002G008900 Sobic003G280800--Sobic002G309600 Sobic003G280800--Sobic001G071400 Sobic003G280800--Sobic002G134200 Sobic006G209850 Sobic006G209850 Sobic003G280800--Sobic006G209850 Sobic003G119000 Sobic003G119000 Sobic003G280800--Sobic003G119000 Sobic001G474600 Sobic001G474600 Sobic003G280800--Sobic001G474600 Sobic007G117400 Sobic007G117400 Sobic003G280800--Sobic007G117400 Sobic003G280800--Sobic006G216800 Sobic003G372700 Sobic003G372700 Sobic003G280800--Sobic003G372700 Sobic004G314000 Sobic004G314000 Sobic010G139000--Sobic004G314000 Sobic005G112300 Sobic005G112300 Sobic010G139000--Sobic005G112300 Sobic010G279450 Sobic010G279450 Sobic010G139000--Sobic010G279450 Sobic010G206900 Sobic010G206900 Sobic010G139000--Sobic010G206900 Sobic001G311500 Sobic001G311500 Sobic010G139000--Sobic001G311500 Sobic001G036050 Sobic001G036050 Sobic010G139000--Sobic001G036050 Sobic010G112100 Sobic010G112100 Sobic010G139000--Sobic010G112100 Sobic010G139000--Sobic010G010700 Sobic010G139000--Sobic005G008800 Sobic003G429650 Sobic003G429650 Sobic006G182900--Sobic003G429650 Sobic006G048500 Sobic006G048500 Sobic006G182900--Sobic006G048500 Sobic007G161000 Sobic007G161000 Sobic006G182900--Sobic007G161000 Sobic001G365900 Sobic001G365900 Sobic006G182900--Sobic001G365900 Sobic006G182900--Sobic007G116200 Sobic004G096600 Sobic004G096600 Sobic006G182900--Sobic004G096600 Sobic006G182900--Sobic002G134200 Sobic001G214300 Sobic001G214300 Sobic006G182900--Sobic001G214300 Sobic009G209300 Sobic009G209300 Sobic006G182900--Sobic009G209300 Sobic002G031400 Sobic002G031400 Sobic010G176550--Sobic002G031400 Sobic010G176550--Sobic004G034800 Sobic001G261573 Sobic001G261573 Sobic010G176550--Sobic001G261573 Sobic003G217700 Sobic003G217700 Sobic010G176550--Sobic003G217700 Sobic007G185700 Sobic007G185700 Sobic010G176550--Sobic007G185700 Sobic001G035900 Sobic001G035900 Sobic010G176550--Sobic001G035900 Sobic003G234900 Sobic003G234900 Sobic010G176550--Sobic003G234900 Sobic010G005600 Sobic010G005600 Sobic010G176550--Sobic010G005600 Sobic010G032900 Sobic010G032900 Sobic010G176550--Sobic010G032900 Sobic002G127550--Sobic003G138500 Sobic010G126000 Sobic010G126000 Sobic002G127550--Sobic010G126000 Sobic008G044100 Sobic008G044100 Sobic002G127550--Sobic008G044100 Sobic002G127550--Sobic004G034800 Sobic001G194200 Sobic001G194200 Sobic002G127550--Sobic001G194200 Sobic008G001200 Sobic008G001200 Sobic002G127550--Sobic008G001200 Sobic002G127550--Sobic010G010700 Sobic004G291900 Sobic004G291900 Sobic002G127550--Sobic004G291900 Sobic002G127550--Sobic004G209600
Octagon: transcription factors


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