Gene annotation
Transcriptome id Sobic.002G169633.2,Sobic.002G169633.1
Synonym -
Functional annotation -
UniProt A0A2U9QI42 , A0A1W0W4F9 , A0A1W0W4L3
Pfam PF13855 PF07714 PF00931
Panther DB PTHR27006 PTHR27006:SF39
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0005515; protein binding GO:0006468protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G16670 : Protein kinase superfamily protein
RAP-DB (Rice) LOC_Os09g15850.1 : Leucine Rich Repeat family protein, expressed
MaizeGDB (Corn) -
Brachypodium KQJ95520 , KQJ95513 , KQJ95517 , KQJ95518 , KQJ95519 , PNT66856
Barley -
Wheat -
Populus PNS94650


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G072500 expressed protein K12879: THO complex subunit 2
2 Sobic.005G032800 splicing factor, putative, expressed K13109: IK, RED, IK cytokine
3 Sobic.004G359800 inositol-1-monophosphatase, putative, expressed -
4 Sobic.004G263600 - K03655: ATP-dependent DNA helicase RecG
5 Sobic.004G174200 pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16, putative, expressed K12813: pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
6 Sobic.010G239600 RNA polymerase I specific transcription initiation factor RRN3 family protein, putative, expressed K15216: RRN3, RNA polymerase I-specific transcription initiation factor RRN3
7 Sobic.007G020500 expressed protein K15198: BDP1, transcription factor TFIIIB component B''
8 Sobic.006G131500 serine/threonine-protein kinase GCN2, putative, expressed K16196: eukaryotic translation initiation factor 2-alpha kinase 4
9 Sobic.007G193700 Sua5/YciO/YrdC/YwlC family protein, putative, expressed -
10 Sobic.005G110300 - -
11 Sobic.010G112000 expressed protein K17906: autophagy-related protein 2
12 Sobic.002G008900 sister chromatid cohesion 2, putative, expressed K06672: SCC2, cohesin loading factor subunit SCC2
13 Sobic.005G110200 - -
14 Sobic.001G474600 calmodulin-binding transcription activator, putative, expressed -
15 Sobic.004G291900 ESP4, putative, expressed K06100: symplekin
16 Sobic.006G055200 RNA-binding motif protein, putative, expressed K13192: RNA-binding protein 26
17 Sobic.004G209600 SWIM zinc finger family protein, putative, expressed -
18 Sobic.003G252200 DDT, putative, expressed -
19 Sobic.003G280800 RNA recognition motif family protein, expressed K13094: RNA-binding protein 5/10
20 Sobic.010G206900 transcription initiation factor TFIID subunit 1, putative, expressed K03125: transcription initiation factor TFIID subunit 1


Gene co-expression network
sample Sobic002G169633 Sobic002G169633 Sobic001G072500 Sobic001G072500 Sobic002G169633--Sobic001G072500 Sobic005G032800 Sobic005G032800 Sobic002G169633--Sobic005G032800 Sobic004G359800 Sobic004G359800 Sobic002G169633--Sobic004G359800 Sobic004G263600 Sobic004G263600 Sobic002G169633--Sobic004G263600 Sobic004G174200 Sobic004G174200 Sobic002G169633--Sobic004G174200 Sobic010G239600 Sobic010G239600 Sobic002G169633--Sobic010G239600 Sobic007G020500 Sobic007G020500 Sobic002G169633--Sobic007G020500 Sobic006G131500 Sobic006G131500 Sobic002G169633--Sobic006G131500 Sobic007G193700 Sobic007G193700 Sobic002G169633--Sobic007G193700 Sobic001G072500--Sobic002G169633 Sobic003G401600 Sobic003G401600 Sobic001G072500--Sobic003G401600 Sobic001G072500--Sobic004G263600 Sobic004G209600 Sobic004G209600 Sobic001G072500--Sobic004G209600 Sobic002G316600 Sobic002G316600 Sobic001G072500--Sobic002G316600 Sobic004G314000 Sobic004G314000 Sobic001G072500--Sobic004G314000 Sobic001G072500--Sobic006G131500 Sobic010G206900 Sobic010G206900 Sobic001G072500--Sobic010G206900 Sobic010G139000 Sobic010G139000 Sobic001G072500--Sobic010G139000 Sobic003G280800 Sobic003G280800 Sobic005G032800--Sobic003G280800 Sobic001G474600 Sobic001G474600 Sobic005G032800--Sobic001G474600 Sobic002G173000 Sobic002G173000 Sobic005G032800--Sobic002G173000 Sobic006G021250 Sobic006G021250 Sobic005G032800--Sobic006G021250 Sobic002G134200 Sobic002G134200 Sobic005G032800--Sobic002G134200 Sobic005G032800--Sobic002G169633 Sobic001G498600 Sobic001G498600 Sobic005G032800--Sobic001G498600 Sobic010G112000 Sobic010G112000 Sobic005G032800--Sobic010G112000 Sobic001G292200 Sobic001G292200 Sobic005G032800--Sobic001G292200 Sobic007G116200 Sobic007G116200 Sobic004G359800--Sobic007G116200 Sobic004G359800--Sobic002G169633 Sobic003G138500 Sobic003G138500 Sobic004G359800--Sobic003G138500 Sobic004G359800--Sobic002G134200 Sobic004G359800--Sobic003G280800 Sobic004G359800--Sobic010G139000 Sobic006G182900 Sobic006G182900 Sobic004G359800--Sobic006G182900 Sobic010G176550 Sobic010G176550 Sobic004G359800--Sobic010G176550 Sobic002G127550 Sobic002G127550 Sobic004G359800--Sobic002G127550 Sobic004G263600--Sobic007G193700 Sobic004G263600--Sobic004G174200 Sobic001G194200 Sobic001G194200 Sobic004G263600--Sobic001G194200 Sobic006G055200 Sobic006G055200 Sobic004G263600--Sobic006G055200 Sobic004G291900 Sobic004G291900 Sobic004G263600--Sobic004G291900 Sobic005G001000 Sobic005G001000 Sobic004G263600--Sobic005G001000 Sobic008G001200 Sobic008G001200 Sobic004G263600--Sobic008G001200 Sobic004G263600--Sobic001G072500 Sobic004G023000 Sobic004G023000 Sobic004G263600--Sobic004G023000 Sobic004G174200--Sobic004G291900 Sobic002G411600 Sobic002G411600 Sobic004G174200--Sobic002G411600 Sobic004G174200--Sobic008G001200 Sobic004G174200--Sobic010G206900 Sobic002G008900 Sobic002G008900 Sobic004G174200--Sobic002G008900 Sobic001G289800 Sobic001G289800 Sobic004G174200--Sobic001G289800 Sobic004G174200--Sobic005G001000 Sobic003G422500 Sobic003G422500 Sobic004G174200--Sobic003G422500 Sobic004G174200--Sobic001G194200 Sobic010G239600--Sobic007G193700 Sobic010G239600--Sobic006G055200 Sobic010G239600--Sobic010G112000 Sobic010G239600--Sobic002G008900 Sobic010G239600--Sobic004G263600 Sobic010G010700 Sobic010G010700 Sobic010G239600--Sobic010G010700 Sobic010G239600--Sobic002G169633 Sobic010G239600--Sobic005G001000 Sobic001G454500 Sobic001G454500 Sobic010G239600--Sobic001G454500 Sobic007G020500--Sobic002G169633 Sobic007G202900 Sobic007G202900 Sobic007G020500--Sobic007G202900 Sobic007G020500--Sobic001G072500 Sobic007G020500--Sobic002G173000 Sobic007G020500--Sobic004G314000 Sobic002G161900 Sobic002G161900 Sobic007G020500--Sobic002G161900 Sobic007G020500--Sobic003G280800 Sobic007G020500--Sobic004G359800 Sobic007G020500--Sobic010G139000 Sobic005G008800 Sobic005G008800 Sobic006G131500--Sobic005G008800 Sobic006G131500--Sobic001G498600 Sobic006G131500--Sobic004G209600 Sobic006G131500--Sobic003G280800 Sobic006G216800 Sobic006G216800 Sobic006G131500--Sobic006G216800 Sobic001G241200 Sobic001G241200 Sobic006G131500--Sobic001G241200 Sobic006G131500--Sobic002G134200 Sobic001G146800 Sobic001G146800 Sobic006G131500--Sobic001G146800 Sobic006G131500--Sobic001G072500 Sobic007G193700--Sobic004G263600 Sobic003G086900 Sobic003G086900 Sobic007G193700--Sobic003G086900 Sobic004G200200 Sobic004G200200 Sobic007G193700--Sobic004G200200 Sobic007G193700--Sobic004G174200 Sobic007G193700--Sobic002G134200 Sobic007G193700--Sobic010G239600 Sobic003G139900 Sobic003G139900 Sobic007G193700--Sobic003G139900 Sobic003G247500 Sobic003G247500 Sobic007G193700--Sobic003G247500 Sobic003G396200 Sobic003G396200 Sobic007G193700--Sobic003G396200
Octagon: transcription factors


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