Gene annotation
Transcriptome id Sobic.009G005100.1
Synonym
Functional annotation -
UniProt A0A1B6P5V4
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G158700 TATA binding protein-associated factor, putative, expressed K03131: transcription initiation factor TFIID subunit 6
2 Sobic.002G396000 XPA-binding protein 2, putative, expressed K12867: SYF1, pre-mRNA-splicing factor SYF1
3 Sobic.001G542700 expressed protein -
4 Sobic.007G061700 vacuolar protein sorting-associated protein 18, putative, expressed -
5 Sobic.006G209850 - -
6 Sobic.001G219600 importin-beta N-terminal domain containing protein, expressed K15436: TRPO3, transportin-3
7 Sobic.003G401000 adaptin, putative, expressed K12400: AP-4 complex subunit epsilon-1
8 Sobic.001G539016 - -
9 Sobic.001G167200 DNA-directed polymerase, putative, expressed K03511: DNA polymerase kappa
10 Sobic.008G024600 expressed protein -
11 Sobic.001G170100 WD domain, G-beta repeat domain containing protein, expressed -
12 Sobic.010G166000 ESP1, putative, expressed -
13 Sobic.005G079025 - -
14 Sobic.003G070100 expressed protein -
15 Sobic.009G247400 PX domain containing protein, putative, expressed K17925: sorting nexin-13
16 Sobic.004G260100 tetratricopeptide repeat, putative, expressed K03255: TIF31, protein TIF31
17 Sobic.008G011100 OsNucAP2 - Putative Nucleoporin Autopeptidase homologue, expressed -
18 Sobic.009G260500 tetratricopeptide repeat containing protein, putative, expressed K14408: CSTF3, cleavage stimulation factor subunit 3
19 Sobic.004G009600 expressed protein K11647: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4
20 Sobic.008G009700 WD domain and HEAT domain containing protein, putative, expressed K07204: regulatory associated protein of mTOR


Gene co-expression network
sample Sobic009G005100 Sobic009G005100 Sobic002G158700 Sobic002G158700 Sobic009G005100--Sobic002G158700 Sobic002G396000 Sobic002G396000 Sobic009G005100--Sobic002G396000 Sobic001G542700 Sobic001G542700 Sobic009G005100--Sobic001G542700 Sobic007G061700 Sobic007G061700 Sobic009G005100--Sobic007G061700 Sobic006G209850 Sobic006G209850 Sobic009G005100--Sobic006G209850 Sobic001G219600 Sobic001G219600 Sobic009G005100--Sobic001G219600 Sobic003G401000 Sobic003G401000 Sobic009G005100--Sobic003G401000 Sobic001G539016 Sobic001G539016 Sobic009G005100--Sobic001G539016 Sobic001G167200 Sobic001G167200 Sobic009G005100--Sobic001G167200 Sobic002G158700--Sobic003G401000 Sobic001G464200 Sobic001G464200 Sobic002G158700--Sobic001G464200 Sobic002G158700--Sobic001G167200 Sobic004G031700 Sobic004G031700 Sobic002G158700--Sobic004G031700 Sobic003G445400 Sobic003G445400 Sobic002G158700--Sobic003G445400 Sobic007G000800 Sobic007G000800 Sobic002G158700--Sobic007G000800 Sobic002G158700--Sobic007G061700 Sobic008G149800 Sobic008G149800 Sobic002G158700--Sobic008G149800 Sobic002G158700--Sobic002G396000 Sobic002G396000--Sobic002G158700 Sobic006G128900 Sobic006G128900 Sobic002G396000--Sobic006G128900 Sobic007G096000 Sobic007G096000 Sobic002G396000--Sobic007G096000 Sobic003G280800 Sobic003G280800 Sobic002G396000--Sobic003G280800 Sobic001G511500 Sobic001G511500 Sobic002G396000--Sobic001G511500 Sobic009G210500 Sobic009G210500 Sobic002G396000--Sobic009G210500 Sobic004G018300 Sobic004G018300 Sobic002G396000--Sobic004G018300 Sobic008G131000 Sobic008G131000 Sobic002G396000--Sobic008G131000 Sobic001G090400 Sobic001G090400 Sobic002G396000--Sobic001G090400 Sobic004G009600 Sobic004G009600 Sobic001G542700--Sobic004G009600 Sobic010G065300 Sobic010G065300 Sobic001G542700--Sobic010G065300 Sobic001G241200 Sobic001G241200 Sobic001G542700--Sobic001G241200 Sobic002G299700 Sobic002G299700 Sobic001G542700--Sobic002G299700 Sobic007G117400 Sobic007G117400 Sobic001G542700--Sobic007G117400 Sobic003G293200 Sobic003G293200 Sobic001G542700--Sobic003G293200 Sobic009G040600 Sobic009G040600 Sobic001G542700--Sobic009G040600 Sobic001G542700--Sobic007G061700 Sobic010G209400 Sobic010G209400 Sobic001G542700--Sobic010G209400 Sobic007G061700--Sobic008G149800 Sobic007G061700--Sobic002G158700 Sobic004G246100 Sobic004G246100 Sobic007G061700--Sobic004G246100 Sobic007G061700--Sobic003G401000 Sobic006G046700 Sobic006G046700 Sobic007G061700--Sobic006G046700 Sobic007G061700--Sobic001G542700 Sobic008G153000 Sobic008G153000 Sobic007G061700--Sobic008G153000 Sobic001G544200 Sobic001G544200 Sobic007G061700--Sobic001G544200 Sobic007G061700--Sobic004G031700 Sobic006G209850--Sobic006G128900 Sobic006G209850--Sobic001G511500 Sobic006G209850--Sobic003G280800 Sobic010G277500 Sobic010G277500 Sobic006G209850--Sobic010G277500 Sobic008G024600 Sobic008G024600 Sobic006G209850--Sobic008G024600 Sobic002G053000 Sobic002G053000 Sobic006G209850--Sobic002G053000 Sobic010G129200 Sobic010G129200 Sobic006G209850--Sobic010G129200 Sobic004G145500 Sobic004G145500 Sobic006G209850--Sobic004G145500 Sobic002G243900 Sobic002G243900 Sobic006G209850--Sobic002G243900 Sobic009G260500 Sobic009G260500 Sobic001G219600--Sobic009G260500 Sobic002G309600 Sobic002G309600 Sobic001G219600--Sobic002G309600 Sobic002G317200 Sobic002G317200 Sobic001G219600--Sobic002G317200 Sobic009G047200 Sobic009G047200 Sobic001G219600--Sobic009G047200 Sobic003G141500 Sobic003G141500 Sobic001G219600--Sobic003G141500 Sobic010G139000 Sobic010G139000 Sobic001G219600--Sobic010G139000 Sobic001G071400 Sobic001G071400 Sobic001G219600--Sobic001G071400 Sobic002G397500 Sobic002G397500 Sobic001G219600--Sobic002G397500 Sobic001G020000 Sobic001G020000 Sobic001G219600--Sobic001G020000 Sobic003G401000--Sobic002G158700 Sobic003G187400 Sobic003G187400 Sobic003G401000--Sobic003G187400 Sobic002G157300 Sobic002G157300 Sobic003G401000--Sobic002G157300 Sobic009G257800 Sobic009G257800 Sobic003G401000--Sobic009G257800 Sobic001G155000 Sobic001G155000 Sobic003G401000--Sobic001G155000 Sobic009G040700 Sobic009G040700 Sobic003G401000--Sobic009G040700 Sobic001G094000 Sobic001G094000 Sobic003G401000--Sobic001G094000 Sobic006G028200 Sobic006G028200 Sobic003G401000--Sobic006G028200 Sobic003G008500 Sobic003G008500 Sobic003G401000--Sobic003G008500 Sobic001G352900 Sobic001G352900 Sobic001G539016--Sobic001G352900 Sobic001G539016--Sobic003G293200 Sobic001G539016--Sobic009G005100 Sobic004G260100 Sobic004G260100 Sobic001G539016--Sobic004G260100 Sobic010G223100 Sobic010G223100 Sobic001G539016--Sobic010G223100 Sobic001G334700 Sobic001G334700 Sobic001G539016--Sobic001G334700 Sobic003G445500 Sobic003G445500 Sobic001G539016--Sobic003G445500 Sobic001G102700 Sobic001G102700 Sobic001G539016--Sobic001G102700 Sobic001G287500 Sobic001G287500 Sobic001G539016--Sobic001G287500 Sobic001G167200--Sobic002G158700 Sobic001G167200--Sobic009G210500 Sobic001G167200--Sobic004G018300 Sobic005G015900 Sobic005G015900 Sobic001G167200--Sobic005G015900 Sobic008G011100 Sobic008G011100 Sobic001G167200--Sobic008G011100 Sobic001G167200--Sobic001G090400 Sobic001G167200--Sobic001G219600 Sobic010G136600 Sobic010G136600 Sobic001G167200--Sobic010G136600 Sobic001G167200--Sobic010G065300
Octagon: transcription factors


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