Gene annotation
Transcriptome id Sobic.003G138600.2,Sobic.003G138600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q340
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g11480.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G039800 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
2 Sobic.001G485600 DAG protein, chloroplast precursor, putative, expressed -
3 Sobic.005G100900 DAG protein, chloroplast precursor, putative, expressed -
4 Sobic.002G146400 - -
5 Sobic.007G168200 peptidyl-prolyl cis-trans isomerase, putative, expressed K12733: peptidyl-prolyl cis-trans isomerase-like 1
6 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
7 Sobic.001G069600 ad-003, putative, expressed K16219: NTMT1, METTL11A, protein N-terminal methyltransferase
8 Sobic.009G133400 mTERF domain containing protein, expressed K15032: mTERF domain-containing protein, mitochondrial
9 Sobic.002G238000 RNA 3-terminal phosphate cyclase, putative, expressed K11108: RNA 3'-terminal phosphate cyclase-like protein
10 Sobic.003G245900 membrane associated DUF588 domain containing protein, putative, expressed -
11 Sobic.001G202400 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed K17278: membrane-associated progesterone receptor component
12 Sobic.006G025000 PCF-like (ClassI) Subclade 8 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
13 Sobic.003G324100 haloacid dehalogenase, putative, expressed K01094: phosphatidylglycerophosphatase GEP4
14 Sobic.009G029700 aminotransferase, putative, expressed K00818: E2.6.1.11, acetylornithine aminotransferase
15 Sobic.001G261597 - K07904: Ras-related protein Rab-11A
16 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
17 Sobic.008G171800 WD domain, G-beta repeat domain containing protein, expressed K14830: MAK11, protein MAK11
18 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
19 Sobic.006G281500 prenylcysteine oxidase 1 precursor, putative, expressed K05906: PCYOX1, prenylcysteine oxidase / farnesylcysteine lyase
20 Sobic.006G272200 cleavage and polyadenylation specificity factor subunit 5, putative, expressed K14397: NUDT21, CPSF5, cleavage and polyadenylation specificity factor subunit 5


Gene co-expression network
sample Sobic003G138600 Sobic003G138600 Sobic001G039800 Sobic001G039800 Sobic003G138600--Sobic001G039800 Sobic001G485600 Sobic001G485600 Sobic003G138600--Sobic001G485600 Sobic005G100900 Sobic005G100900 Sobic003G138600--Sobic005G100900 Sobic002G146400 Sobic002G146400 Sobic003G138600--Sobic002G146400 Sobic007G168200 Sobic007G168200 Sobic003G138600--Sobic007G168200 Sobic001G294200 Sobic001G294200 Sobic003G138600--Sobic001G294200 Sobic001G069600 Sobic001G069600 Sobic003G138600--Sobic001G069600 Sobic009G133400 Sobic009G133400 Sobic003G138600--Sobic009G133400 Sobic002G238000 Sobic002G238000 Sobic003G138600--Sobic002G238000 Sobic001G039800--Sobic007G168200 Sobic001G039800--Sobic003G138600 Sobic002G242200 Sobic002G242200 Sobic001G039800--Sobic002G242200 Sobic009G190800 Sobic009G190800 Sobic001G039800--Sobic009G190800 Sobic006G269000 Sobic006G269000 Sobic001G039800--Sobic006G269000 Sobic004G060600 Sobic004G060600 Sobic001G039800--Sobic004G060600 Sobic010G108900 Sobic010G108900 Sobic001G039800--Sobic010G108900 Sobic001G039800--Sobic001G294200 Sobic001G218800 Sobic001G218800 Sobic001G039800--Sobic001G218800 Sobic008G056900 Sobic008G056900 Sobic001G485600--Sobic008G056900 Sobic009G096100 Sobic009G096100 Sobic001G485600--Sobic009G096100 Sobic003G324100 Sobic003G324100 Sobic001G485600--Sobic003G324100 Sobic003G245900 Sobic003G245900 Sobic001G485600--Sobic003G245900 Sobic001G362300 Sobic001G362300 Sobic001G485600--Sobic001G362300 Sobic008G081600 Sobic008G081600 Sobic001G485600--Sobic008G081600 Sobic001G485600--Sobic005G100900 Sobic003G174800 Sobic003G174800 Sobic001G485600--Sobic003G174800 Sobic007G197400 Sobic007G197400 Sobic001G485600--Sobic007G197400 Sobic005G100900--Sobic002G238000 Sobic009G071700 Sobic009G071700 Sobic005G100900--Sobic009G071700 Sobic007G114000 Sobic007G114000 Sobic005G100900--Sobic007G114000 Sobic003G425100 Sobic003G425100 Sobic005G100900--Sobic003G425100 Sobic001G119600 Sobic001G119600 Sobic005G100900--Sobic001G119600 Sobic002G262100 Sobic002G262100 Sobic005G100900--Sobic002G262100 Sobic004G173100 Sobic004G173100 Sobic005G100900--Sobic004G173100 Sobic005G100900--Sobic001G485600 Sobic008G165900 Sobic008G165900 Sobic005G100900--Sobic008G165900 Sobic002G146400--Sobic003G324100 Sobic001G422500 Sobic001G422500 Sobic002G146400--Sobic001G422500 Sobic003G332900 Sobic003G332900 Sobic002G146400--Sobic003G332900 Sobic002G146400--Sobic001G362300 Sobic002G146400--Sobic005G100900 Sobic002G146400--Sobic001G485600 Sobic002G146400--Sobic002G262100 Sobic002G146400--Sobic008G165900 Sobic001G322600 Sobic001G322600 Sobic002G146400--Sobic001G322600 Sobic001G380500 Sobic001G380500 Sobic007G168200--Sobic001G380500 Sobic007G168200--Sobic009G190800 Sobic007G168200--Sobic001G039800 Sobic007G168200--Sobic001G294200 Sobic007G168200--Sobic006G269000 Sobic009G065200 Sobic009G065200 Sobic007G168200--Sobic009G065200 Sobic001G341800 Sobic001G341800 Sobic007G168200--Sobic001G341800 Sobic004G214100 Sobic004G214100 Sobic007G168200--Sobic004G214100 Sobic003G103200 Sobic003G103200 Sobic007G168200--Sobic003G103200 Sobic003G078800 Sobic003G078800 Sobic001G294200--Sobic003G078800 Sobic001G543300 Sobic001G543300 Sobic001G294200--Sobic001G543300 Sobic006G262900 Sobic006G262900 Sobic001G294200--Sobic006G262900 Sobic001G512600 Sobic001G512600 Sobic001G294200--Sobic001G512600 Sobic001G294200--Sobic009G133400 Sobic002G129000 Sobic002G129000 Sobic001G294200--Sobic002G129000 Sobic001G365800 Sobic001G365800 Sobic001G294200--Sobic001G365800 Sobic004G301900 Sobic004G301900 Sobic001G294200--Sobic004G301900 Sobic001G078800 Sobic001G078800 Sobic001G294200--Sobic001G078800 Sobic004G086700 Sobic004G086700 Sobic001G069600--Sobic004G086700 Sobic002G404200 Sobic002G404200 Sobic001G069600--Sobic002G404200 Sobic010G265300 Sobic010G265300 Sobic001G069600--Sobic010G265300 Sobic002G083900 Sobic002G083900 Sobic001G069600--Sobic002G083900 Sobic001G043800 Sobic001G043800 Sobic001G069600--Sobic001G043800 Sobic001G069600--Sobic003G324100 Sobic008G193300 Sobic008G193300 Sobic001G069600--Sobic008G193300 Sobic004G265900 Sobic004G265900 Sobic001G069600--Sobic004G265900 Sobic001G429300 Sobic001G429300 Sobic001G069600--Sobic001G429300 Sobic004G356900 Sobic004G356900 Sobic009G133400--Sobic004G356900 Sobic006G242300 Sobic006G242300 Sobic009G133400--Sobic006G242300 Sobic010G146600 Sobic010G146600 Sobic009G133400--Sobic010G146600 Sobic004G348100 Sobic004G348100 Sobic009G133400--Sobic004G348100 Sobic009G133400--Sobic004G301900 Sobic010G247400 Sobic010G247400 Sobic009G133400--Sobic010G247400 Sobic010G251100 Sobic010G251100 Sobic009G133400--Sobic010G251100 Sobic009G133400--Sobic001G512600 Sobic007G203700 Sobic007G203700 Sobic009G133400--Sobic007G203700 Sobic002G238000--Sobic005G100900 Sobic002G238000--Sobic008G165900 Sobic002G238000--Sobic009G071700 Sobic006G125900 Sobic006G125900 Sobic002G238000--Sobic006G125900 Sobic002G238000--Sobic002G262100 Sobic010G228700 Sobic010G228700 Sobic002G238000--Sobic010G228700 Sobic001G224200 Sobic001G224200 Sobic002G238000--Sobic001G224200 Sobic002G092050 Sobic002G092050 Sobic002G238000--Sobic002G092050 Sobic004G268100 Sobic004G268100 Sobic002G238000--Sobic004G268100
Octagon: transcription factors


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