Gene annotation
Transcriptome id Sobic.001G039800.1
Synonym ATERF10, Sb01g003670, ethylene response factor 2, ERF10, SbERF2
Functional annotation Not investigated (PubMedID : 23766026)
AP2 domain containing protein, expressed
UniProt C5WV63
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT4G27950 : cytokinin response factor 4
RAP-DB (Rice) LOC_Os03g60120.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a008746
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G039800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G168200 peptidyl-prolyl cis-trans isomerase, putative, expressed K12733: peptidyl-prolyl cis-trans isomerase-like 1
2 Sobic.003G138600 expressed protein -
3 Sobic.002G242200 expressed protein -
4 Sobic.009G190800 thioredoxin, putative, expressed K03671: thioredoxin 1
5 Sobic.006G269000 protein kinase, putative, expressed -
6 Sobic.004G060600 expressed protein K13105: proline-rich protein PRCC
7 Sobic.010G108900 RAD23 DNA repair protein, putative, expressed K10839: RAD23, UV excision repair protein RAD23
8 Sobic.001G294200 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
9 Sobic.001G218800 expressed protein -
10 Sobic.006G233300 RNA binding protein, putative, expressed K12741: heterogeneous nuclear ribonucleoprotein A1/A3
11 Sobic.001G069600 ad-003, putative, expressed K16219: NTMT1, METTL11A, protein N-terminal methyltransferase
12 Sobic.004G018400 peptidyl-prolyl cis-trans isomerase, putative, expressed K01802: peptidylprolyl isomerase
13 Sobic.001G380500 appr-1-p processing enzyme family protein, putative, expressed -
14 Sobic.003G158700 exocyst complex component 6, putative, expressed -
15 Sobic.002G280600 hydroxyproline-rich glycoprotein family protein, putative, expressed -
16 Sobic.002G394800 SWIB/MDM2 domain containing protein, expressed K11650: SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
17 Sobic.004G028000 expressed protein -
18 Sobic.006G127400 inactive receptor kinase At1g27190 precursor, putative, expressed -
19 Sobic.002G262000 ankyrin repeat domain containing protein, putative, expressed -
20 Sobic.001G543300 dehydrogenase, putative, expressed -


Gene co-expression network
sample Sobic001G039800 Sobic001G039800 Sobic007G168200 Sobic007G168200 Sobic001G039800--Sobic007G168200 Sobic003G138600 Sobic003G138600 Sobic001G039800--Sobic003G138600 Sobic002G242200 Sobic002G242200 Sobic001G039800--Sobic002G242200 Sobic009G190800 Sobic009G190800 Sobic001G039800--Sobic009G190800 Sobic006G269000 Sobic006G269000 Sobic001G039800--Sobic006G269000 Sobic004G060600 Sobic004G060600 Sobic001G039800--Sobic004G060600 Sobic010G108900 Sobic010G108900 Sobic001G039800--Sobic010G108900 Sobic001G294200 Sobic001G294200 Sobic001G039800--Sobic001G294200 Sobic001G218800 Sobic001G218800 Sobic001G039800--Sobic001G218800 Sobic001G380500 Sobic001G380500 Sobic007G168200--Sobic001G380500 Sobic007G168200--Sobic009G190800 Sobic007G168200--Sobic001G039800 Sobic007G168200--Sobic001G294200 Sobic007G168200--Sobic006G269000 Sobic009G065200 Sobic009G065200 Sobic007G168200--Sobic009G065200 Sobic001G341800 Sobic001G341800 Sobic007G168200--Sobic001G341800 Sobic004G214100 Sobic004G214100 Sobic007G168200--Sobic004G214100 Sobic003G103200 Sobic003G103200 Sobic007G168200--Sobic003G103200 Sobic003G138600--Sobic001G039800 Sobic001G485600 Sobic001G485600 Sobic003G138600--Sobic001G485600 Sobic005G100900 Sobic005G100900 Sobic003G138600--Sobic005G100900 Sobic002G146400 Sobic002G146400 Sobic003G138600--Sobic002G146400 Sobic003G138600--Sobic007G168200 Sobic003G138600--Sobic001G294200 Sobic001G069600 Sobic001G069600 Sobic003G138600--Sobic001G069600 Sobic009G133400 Sobic009G133400 Sobic003G138600--Sobic009G133400 Sobic002G238000 Sobic002G238000 Sobic003G138600--Sobic002G238000 Sobic007G097900 Sobic007G097900 Sobic002G242200--Sobic007G097900 Sobic005G160400 Sobic005G160400 Sobic002G242200--Sobic005G160400 Sobic003G127300 Sobic003G127300 Sobic002G242200--Sobic003G127300 Sobic003G299000 Sobic003G299000 Sobic002G242200--Sobic003G299000 Sobic010G092300 Sobic010G092300 Sobic002G242200--Sobic010G092300 Sobic001G207500 Sobic001G207500 Sobic002G242200--Sobic001G207500 Sobic010G265300 Sobic010G265300 Sobic002G242200--Sobic010G265300 Sobic004G318000 Sobic004G318000 Sobic002G242200--Sobic004G318000 Sobic002G009200 Sobic002G009200 Sobic002G242200--Sobic002G009200 Sobic009G190800--Sobic001G341800 Sobic001G022600 Sobic001G022600 Sobic009G190800--Sobic001G022600 Sobic003G359900 Sobic003G359900 Sobic009G190800--Sobic003G359900 Sobic009G190800--Sobic003G103200 Sobic009G190800--Sobic004G214100 Sobic002G281800 Sobic002G281800 Sobic009G190800--Sobic002G281800 Sobic005G072200 Sobic005G072200 Sobic009G190800--Sobic005G072200 Sobic001G416300 Sobic001G416300 Sobic009G190800--Sobic001G416300 Sobic009G190800--Sobic007G168200 Sobic002G137300 Sobic002G137300 Sobic006G269000--Sobic002G137300 Sobic006G004600 Sobic006G004600 Sobic006G269000--Sobic006G004600 Sobic006G269000--Sobic004G214100 Sobic001G072800 Sobic001G072800 Sobic006G269000--Sobic001G072800 Sobic003G261900 Sobic003G261900 Sobic006G269000--Sobic003G261900 Sobic006G269000--Sobic007G168200 Sobic006G269000--Sobic002G242200 Sobic006G269000--Sobic009G190800 Sobic001G417900 Sobic001G417900 Sobic006G269000--Sobic001G417900 Sobic003G077900 Sobic003G077900 Sobic004G060600--Sobic003G077900 Sobic002G400000 Sobic002G400000 Sobic004G060600--Sobic002G400000 Sobic009G131100 Sobic009G131100 Sobic004G060600--Sobic009G131100 Sobic001G428100 Sobic001G428100 Sobic004G060600--Sobic001G428100 Sobic007G203700 Sobic007G203700 Sobic004G060600--Sobic007G203700 Sobic009G198500 Sobic009G198500 Sobic004G060600--Sobic009G198500 Sobic007G168600 Sobic007G168600 Sobic004G060600--Sobic007G168600 Sobic003G117300 Sobic003G117300 Sobic004G060600--Sobic003G117300 Sobic001G364600 Sobic001G364600 Sobic004G060600--Sobic001G364600 Sobic010G108900--Sobic001G380500 Sobic010G108900--Sobic001G218800 Sobic006G168400 Sobic006G168400 Sobic010G108900--Sobic006G168400 Sobic003G004700 Sobic003G004700 Sobic010G108900--Sobic003G004700 Sobic006G183000 Sobic006G183000 Sobic010G108900--Sobic006G183000 Sobic001G469200 Sobic001G469200 Sobic010G108900--Sobic001G469200 Sobic002G262000 Sobic002G262000 Sobic010G108900--Sobic002G262000 Sobic009G108500 Sobic009G108500 Sobic010G108900--Sobic009G108500 Sobic006G109700 Sobic006G109700 Sobic010G108900--Sobic006G109700 Sobic003G078800 Sobic003G078800 Sobic001G294200--Sobic003G078800 Sobic001G543300 Sobic001G543300 Sobic001G294200--Sobic001G543300 Sobic006G262900 Sobic006G262900 Sobic001G294200--Sobic006G262900 Sobic001G512600 Sobic001G512600 Sobic001G294200--Sobic001G512600 Sobic001G294200--Sobic009G133400 Sobic002G129000 Sobic002G129000 Sobic001G294200--Sobic002G129000 Sobic001G365800 Sobic001G365800 Sobic001G294200--Sobic001G365800 Sobic004G301900 Sobic004G301900 Sobic001G294200--Sobic004G301900 Sobic001G078800 Sobic001G078800 Sobic001G294200--Sobic001G078800 Sobic001G218800--Sobic010G108900 Sobic001G218800--Sobic003G004700 Sobic010G176500 Sobic010G176500 Sobic001G218800--Sobic010G176500 Sobic003G123000 Sobic003G123000 Sobic001G218800--Sobic003G123000 Sobic010G000300 Sobic010G000300 Sobic001G218800--Sobic010G000300 Sobic001G218800--Sobic001G380500 Sobic006G087100 Sobic006G087100 Sobic001G218800--Sobic006G087100 Sobic006G233300 Sobic006G233300 Sobic001G218800--Sobic006G233300 Sobic001G218800--Sobic009G108500
Octagon: transcription factors


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