Gene annotation
Transcriptome id Sobic.001G538800.2,Sobic.001G538800.1
Synonym ATPTPKIS1, DSP4, SEX4, ATSEX4
Functional annotation dual specificity protein phosphatase, putative, expressed
UniProt A0A1B6QR46
Pfam PF00782 PF16561
Panther DB PTHR10343 PTHR10343:SF58
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008138; protein tyrosine/serine/threonine phosphatase activity GO:0006470protein dephosphorylation


Orthologs (automatic annotation)
TAIR AT3G52180 : dual specificity protein phosphatase (DsPTP1) family protein
RAP-DB (Rice) LOC_Os03g01750.2,LOC_Os03g01750.1 : dual specificity protein phosphatase, putative, expressed
MaizeGDB (Corn) Zm00025a000148
Brachypodium KQK24081
Barley HORVU4Hr1G086650.1 , HORVU4Hr1G086650.3 , HORVU4Hr1G086650.2 , HORVU4Hr1G086650.5 , HORVU4Hr1G086650.4 , HORVU4Hr1G086650.7 , HORVU4Hr1G086650.6 , HORVU4Hr1G086650.9 , HORVU4Hr1G086650.8 , HORVU4Hr1G086650.14 , HORVU4Hr1G086650.16 , HORVU4Hr1G086650.11 , HORVU4Hr1G086650.10 , HORVU4Hr1G086650.12
Wheat TraesCS4D02G353800 , TraesCS4D02G353800 , TraesCS4B02G360800 , TraesCS5A02G529100 , TraesCS5A02G529100 , TraesCS4B02G360800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G081600 expressed protein -
2 Sobic.001G092300 PPR repeat containing protein, expressed -
3 Sobic.006G089400 cleft lip and palate transmembrane protein 1, putative, expressed -
4 Sobic.010G143500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@alpha-glucan water dikinase, chloroplast precursor, putative, expressed K08244: alpha-glucan, water dikinase
5 Sobic.006G078600 expressed protein K11426: [histone H3]-lysine4/36 N-trimethyltransferase SMYD
6 Sobic.002G298100 expressed protein -
7 Sobic.009G251200 expressed protein -
8 Sobic.005G064700 expressed protein -
9 Sobic.010G035801 - -
10 Sobic.010G134600 pentatricopeptide, putative, expressed -
11 Sobic.002G317400 expressed protein -
12 Sobic.010G172900 histone deacetylase, putative, expressed K11418: histone deacetylase 11
13 Sobic.010G098200 peroxidase family protein, expressed -
14 Sobic.004G111600 - -
15 Sobic.001G326300 PPR repeat domain containing protein, putative, expressed -
16 Sobic.001G376100 expressed high in CK60 (an inefficient nitrogen user)(PubMedID : 28697783)@OsFBX72 - F-box domain containing protein, expressed -
17 Sobic.006G054233 - -
18 Sobic.003G039900 OsFBDUF1 - F-box and DUF domain containing protein, expressed -
19 Sobic.001G373400 peptidyl-tRNA hydrolase, mitochondrial precursor protein, putative, expressed K01056: PTH1, pth, peptidyl-tRNA hydrolase, PTH1 family
20 Sobic.002G191100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -


Gene co-expression network
sample Sobic001G538800 Sobic001G538800 Sobic008G081600 Sobic008G081600 Sobic001G538800--Sobic008G081600 Sobic001G092300 Sobic001G092300 Sobic001G538800--Sobic001G092300 Sobic006G089400 Sobic006G089400 Sobic001G538800--Sobic006G089400 Sobic010G143500 Sobic010G143500 Sobic001G538800--Sobic010G143500 Sobic006G078600 Sobic006G078600 Sobic001G538800--Sobic006G078600 Sobic002G298100 Sobic002G298100 Sobic001G538800--Sobic002G298100 Sobic009G251200 Sobic009G251200 Sobic001G538800--Sobic009G251200 Sobic005G064700 Sobic005G064700 Sobic001G538800--Sobic005G064700 Sobic010G035801 Sobic010G035801 Sobic001G538800--Sobic010G035801 Sobic008G056900 Sobic008G056900 Sobic008G081600--Sobic008G056900 Sobic008G081600--Sobic006G078600 Sobic002G336800 Sobic002G336800 Sobic008G081600--Sobic002G336800 Sobic001G087100 Sobic001G087100 Sobic008G081600--Sobic001G087100 Sobic001G485600 Sobic001G485600 Sobic008G081600--Sobic001G485600 Sobic002G378100 Sobic002G378100 Sobic008G081600--Sobic002G378100 Sobic009G096100 Sobic009G096100 Sobic008G081600--Sobic009G096100 Sobic002G344500 Sobic002G344500 Sobic008G081600--Sobic002G344500 Sobic008G081600--Sobic002G298100 Sobic003G444800 Sobic003G444800 Sobic001G092300--Sobic003G444800 SobicK028600 SobicK028600 Sobic001G092300--SobicK028600 Sobic003G039900 Sobic003G039900 Sobic001G092300--Sobic003G039900 Sobic001G092300--Sobic009G251200 Sobic002G356200 Sobic002G356200 Sobic001G092300--Sobic002G356200 Sobic001G376100 Sobic001G376100 Sobic001G092300--Sobic001G376100 Sobic009G194000 Sobic009G194000 Sobic001G092300--Sobic009G194000 Sobic001G092300--Sobic001G538800 Sobic002G317400 Sobic002G317400 Sobic001G092300--Sobic002G317400 Sobic010G100800 Sobic010G100800 Sobic006G089400--Sobic010G100800 Sobic006G058800 Sobic006G058800 Sobic006G089400--Sobic006G058800 Sobic001G501300 Sobic001G501300 Sobic006G089400--Sobic001G501300 Sobic006G089400--Sobic010G143500 Sobic007G029500 Sobic007G029500 Sobic006G089400--Sobic007G029500 Sobic003G134000 Sobic003G134000 Sobic006G089400--Sobic003G134000 Sobic004G176000 Sobic004G176000 Sobic006G089400--Sobic004G176000 Sobic001G207200 Sobic001G207200 Sobic006G089400--Sobic001G207200 Sobic002G191100 Sobic002G191100 Sobic006G089400--Sobic002G191100 Sobic010G143500--Sobic006G089400 Sobic010G143500--Sobic001G538800 Sobic005G145300 Sobic005G145300 Sobic010G143500--Sobic005G145300 Sobic001G466800 Sobic001G466800 Sobic010G143500--Sobic001G466800 Sobic003G297800 Sobic003G297800 Sobic010G143500--Sobic003G297800 Sobic008G189900 Sobic008G189900 Sobic010G143500--Sobic008G189900 Sobic001G114400 Sobic001G114400 Sobic010G143500--Sobic001G114400 Sobic010G143500--Sobic002G191100 Sobic004G296000 Sobic004G296000 Sobic010G143500--Sobic004G296000 Sobic008G152900 Sobic008G152900 Sobic006G078600--Sobic008G152900 Sobic004G018300 Sobic004G018300 Sobic006G078600--Sobic004G018300 Sobic006G078600--Sobic002G336800 Sobic004G219100 Sobic004G219100 Sobic006G078600--Sobic004G219100 Sobic002G158700 Sobic002G158700 Sobic006G078600--Sobic002G158700 Sobic005G013200 Sobic005G013200 Sobic006G078600--Sobic005G013200 Sobic002G278000 Sobic002G278000 Sobic006G078600--Sobic002G278000 Sobic008G149800 Sobic008G149800 Sobic006G078600--Sobic008G149800 Sobic010G166000 Sobic010G166000 Sobic006G078600--Sobic010G166000 Sobic002G298100--Sobic009G251200 Sobic010G098200 Sobic010G098200 Sobic002G298100--Sobic010G098200 Sobic010G140400 Sobic010G140400 Sobic002G298100--Sobic010G140400 Sobic002G298100--Sobic004G018300 Sobic008G051200 Sobic008G051200 Sobic002G298100--Sobic008G051200 Sobic004G171200 Sobic004G171200 Sobic002G298100--Sobic004G171200 Sobic005G160100 Sobic005G160100 Sobic002G298100--Sobic005G160100 Sobic003G434700 Sobic003G434700 Sobic002G298100--Sobic003G434700 Sobic001G219600 Sobic001G219600 Sobic002G298100--Sobic001G219600 Sobic009G251200--Sobic002G298100 Sobic003G133900 Sobic003G133900 Sobic009G251200--Sobic003G133900 Sobic009G251200--Sobic005G160100 Sobic001G081000 Sobic001G081000 Sobic009G251200--Sobic001G081000 Sobic006G226300 Sobic006G226300 Sobic009G251200--Sobic006G226300 Sobic004G309900 Sobic004G309900 Sobic009G251200--Sobic004G309900 Sobic006G185200 Sobic006G185200 Sobic009G251200--Sobic006G185200 Sobic001G393900 Sobic001G393900 Sobic009G251200--Sobic001G393900 Sobic008G014500 Sobic008G014500 Sobic009G251200--Sobic008G014500 Sobic008G106600 Sobic008G106600 Sobic005G064700--Sobic008G106600 Sobic001G261537 Sobic001G261537 Sobic005G064700--Sobic001G261537 Sobic006G028700 Sobic006G028700 Sobic005G064700--Sobic006G028700 Sobic003G068750 Sobic003G068750 Sobic005G064700--Sobic003G068750 Sobic004G089500 Sobic004G089500 Sobic005G064700--Sobic004G089500 Sobic009G228400 Sobic009G228400 Sobic005G064700--Sobic009G228400 Sobic009G000400 Sobic009G000400 Sobic005G064700--Sobic009G000400 Sobic002G019750 Sobic002G019750 Sobic005G064700--Sobic002G019750 Sobic004G068100 Sobic004G068100 Sobic005G064700--Sobic004G068100 Sobic010G209700 Sobic010G209700 Sobic010G035801--Sobic010G209700 Sobic010G035801--Sobic009G228400 Sobic003G229400 Sobic003G229400 Sobic010G035801--Sobic003G229400 Sobic004G218300 Sobic004G218300 Sobic010G035801--Sobic004G218300 Sobic002G203600 Sobic002G203600 Sobic010G035801--Sobic002G203600 Sobic006G100000 Sobic006G100000 Sobic010G035801--Sobic006G100000 Sobic004G042900 Sobic004G042900 Sobic010G035801--Sobic004G042900 Sobic006G215100 Sobic006G215100 Sobic010G035801--Sobic006G215100 Sobic010G035801--Sobic008G152900
Octagon: transcription factors


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