Gene annotation
Transcriptome id Sobic.010G143500.1
Synonym Sb10g017820, SOP1, GWD, GWD1, SEX1, SOP
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
alpha-glucan water dikinase, chloroplast precursor, putative, expressed
UniProt C5Z316
Pfam PF01326
Panther DB PTHR22931 PTHR22931:SF1
NCBI CDD -
KEGG Orthology K08244; alpha-glucan, water dikinase
Gene Ontology GO:0016310; phosphorylation GO:0016301kinase activity GO:0005524ATP binding


Orthologs (automatic annotation)
TAIR AT1G10760 : Pyruvate phosphate dikinase, PEP/pyruvate binding domain
RAP-DB (Rice) LOC_Os06g30310.1 : alpha-glucan water dikinase, chloroplast precursor, putative, expressed
MaizeGDB (Corn) Zm00025a042387
Brachypodium PNT66432 , KQK18353
Barley HORVU7Hr1G048330.16 , HORVU7Hr1G048330.39 , HORVU7Hr1G048330.38 , HORVU7Hr1G048330.31 , HORVU7Hr1G048330.30 , HORVU7Hr1G048330.33 , HORVU7Hr1G048330.32 , HORVU7Hr1G048330.35 , HORVU7Hr1G048330.34 , HORVU7Hr1G048330.37 , HORVU7Hr1G048330.36 , HORVU7Hr1G048330.28 , HORVU7Hr1G048330.29 , HORVU7Hr1G048330.26 , HORVU7Hr1G048330.27 , HORVU7Hr1G048330.24 , HORVU7Hr1G048330.25 , HORVU7Hr1G048330.22 , HORVU7Hr1G048330.23 , HORVU7Hr1G048330.20 , HORVU7Hr1G048330.21 , HORVU7Hr1G048330.8 , HORVU7Hr1G048330.6 , HORVU7Hr1G048330.9 , HORVU7Hr1G048330.7 , HORVU7Hr1G048330.5 , HORVU7Hr1G048330.4 , HORVU7Hr1G048330.3 , HORVU7Hr1G048330.2 , HORVU7Hr1G048330.1 , HORVU7Hr1G048330.40 , HORVU7Hr1G048330.41 , HORVU7Hr1G048330.42 , HORVU7Hr1G048330.43 , HORVU7Hr1G048330.44 , HORVU7Hr1G048330.45 , HORVU1Hr1G082220.12 , HORVU1Hr1G082220.9 , HORVU1Hr1G082220.6 , HORVU7Hr1G048330.17 , HORVU7Hr1G048330.15 , HORVU7Hr1G048330.14 , HORVU7Hr1G048330.13 , HORVU7Hr1G048330.12 , HORVU7Hr1G048330.11 , HORVU7Hr1G048330.10 , HORVU7Hr1G048330.19 , HORVU7Hr1G048330.18 , HORVU1Hr1G082220.11 , HORVU1Hr1G082220.10 , HORVU1Hr1G082220.13 , HORVU1Hr1G082220.14
Wheat TraesCS1A02G346200 , TraesCS7A02G235200 , TraesCS7A02G235200 , TraesCS7A02G235200 , TraesCS7A02G235200 , TraesCS1B02G359800 , TraesCS7B02G133400 , TraesCS1D02G348900 , TraesCS1D02G348900 , TraesCS7D02G235200
Populus -


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cDNA sequences
Sobic.010G143500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G089400 cleft lip and palate transmembrane protein 1, putative, expressed -
2 Sobic.001G538800 dual specificity protein phosphatase, putative, expressed -
3 Sobic.005G145300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBO10 - F-box and other domain containing protein, expressed K12116: flavin-binding kelch repeat F-box protein 1
4 Sobic.001G466800 expressed protein -
5 Sobic.003G297800 GTP-binding protein typA/bipA, putative, expressed K06207: typA, GTP-binding protein
6 Sobic.008G189900 NB-ARC domain containing protein, expressed -
7 Sobic.001G114400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoribosylformylglycinamidine synthase, putative, expressed K01952: PFAS, phosphoribosylformylglycinamidine synthase
8 Sobic.002G191100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
9 Sobic.004G296000 ceramide kinase-related, putative, expressed K04715: ceramide kinase
10 Sobic.008G081600 expressed protein -
11 Sobic.010G134600 pentatricopeptide, putative, expressed -
12 Sobic.010G083900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsPOP12 - Putative Prolyl Oligopeptidase homologue, expressed -
13 Sobic.003G222600 similar to DEAD-box ATP-dependent RNA helicase 25(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
14 Sobic.004G070200 Trihelix Family(PubMedID : 24864043)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@metallo-beta-lactamase, putative, expressed -
15 Sobic.002G172600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional protein folD, putative, expressed -
16 Sobic.003G358900 transporter, major facilitator family, putative, expressed K08193: MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other
17 Sobic.001G207200 MEE12, putative, expressed -
18 Sobic.004G247800 SET domain-containing protein, putative, expressed -
19 Sobic.007G131200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.008G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein DSP1, putative, expressed -


Gene co-expression network
sample Sobic010G143500 Sobic010G143500 Sobic006G089400 Sobic006G089400 Sobic010G143500--Sobic006G089400 Sobic001G538800 Sobic001G538800 Sobic010G143500--Sobic001G538800 Sobic005G145300 Sobic005G145300 Sobic010G143500--Sobic005G145300 Sobic001G466800 Sobic001G466800 Sobic010G143500--Sobic001G466800 Sobic003G297800 Sobic003G297800 Sobic010G143500--Sobic003G297800 Sobic008G189900 Sobic008G189900 Sobic010G143500--Sobic008G189900 Sobic001G114400 Sobic001G114400 Sobic010G143500--Sobic001G114400 Sobic002G191100 Sobic002G191100 Sobic010G143500--Sobic002G191100 Sobic004G296000 Sobic004G296000 Sobic010G143500--Sobic004G296000 Sobic010G100800 Sobic010G100800 Sobic006G089400--Sobic010G100800 Sobic006G058800 Sobic006G058800 Sobic006G089400--Sobic006G058800 Sobic001G501300 Sobic001G501300 Sobic006G089400--Sobic001G501300 Sobic006G089400--Sobic010G143500 Sobic007G029500 Sobic007G029500 Sobic006G089400--Sobic007G029500 Sobic003G134000 Sobic003G134000 Sobic006G089400--Sobic003G134000 Sobic004G176000 Sobic004G176000 Sobic006G089400--Sobic004G176000 Sobic001G207200 Sobic001G207200 Sobic006G089400--Sobic001G207200 Sobic006G089400--Sobic002G191100 Sobic008G081600 Sobic008G081600 Sobic001G538800--Sobic008G081600 Sobic001G092300 Sobic001G092300 Sobic001G538800--Sobic001G092300 Sobic001G538800--Sobic006G089400 Sobic001G538800--Sobic010G143500 Sobic006G078600 Sobic006G078600 Sobic001G538800--Sobic006G078600 Sobic002G298100 Sobic002G298100 Sobic001G538800--Sobic002G298100 Sobic009G251200 Sobic009G251200 Sobic001G538800--Sobic009G251200 Sobic005G064700 Sobic005G064700 Sobic001G538800--Sobic005G064700 Sobic010G035801 Sobic010G035801 Sobic001G538800--Sobic010G035801 Sobic001G367500 Sobic001G367500 Sobic005G145300--Sobic001G367500 Sobic008G148400 Sobic008G148400 Sobic005G145300--Sobic008G148400 Sobic005G145300--Sobic004G296000 Sobic009G238100 Sobic009G238100 Sobic005G145300--Sobic009G238100 Sobic003G030400 Sobic003G030400 Sobic005G145300--Sobic003G030400 Sobic005G145300--Sobic001G114400 Sobic009G036300 Sobic009G036300 Sobic005G145300--Sobic009G036300 Sobic010G074200 Sobic010G074200 Sobic005G145300--Sobic010G074200 Sobic010G074100 Sobic010G074100 Sobic005G145300--Sobic010G074100 Sobic001G466800--Sobic010G143500 Sobic001G466800--Sobic006G089400 Sobic003G212100 Sobic003G212100 Sobic001G466800--Sobic003G212100 Sobic010G158000 Sobic010G158000 Sobic001G466800--Sobic010G158000 Sobic001G466800--Sobic003G297800 Sobic003G038400 Sobic003G038400 Sobic001G466800--Sobic003G038400 Sobic010G272900 Sobic010G272900 Sobic001G466800--Sobic010G272900 Sobic010G255900 Sobic010G255900 Sobic001G466800--Sobic010G255900 Sobic001G057400 Sobic001G057400 Sobic001G466800--Sobic001G057400 Sobic003G297800--Sobic001G207200 Sobic003G297800--Sobic006G089400 Sobic005G140500 Sobic005G140500 Sobic003G297800--Sobic005G140500 Sobic002G428800 Sobic002G428800 Sobic003G297800--Sobic002G428800 Sobic009G094700 Sobic009G094700 Sobic003G297800--Sobic009G094700 Sobic010G039200 Sobic010G039200 Sobic003G297800--Sobic010G039200 Sobic002G092050 Sobic002G092050 Sobic003G297800--Sobic002G092050 Sobic003G297800--Sobic010G143500 Sobic010G176300 Sobic010G176300 Sobic003G297800--Sobic010G176300 Sobic004G231600 Sobic004G231600 Sobic008G189900--Sobic004G231600 Sobic008G189900--Sobic006G089400 Sobic010G016600 Sobic010G016600 Sobic008G189900--Sobic010G016600 Sobic008G189900--Sobic010G143500 Sobic008G189900--Sobic004G296000 Sobic008G189900--Sobic001G207200 Sobic006G083300 Sobic006G083300 Sobic008G189900--Sobic006G083300 Sobic003G068400 Sobic003G068400 Sobic008G189900--Sobic003G068400 Sobic003G358900 Sobic003G358900 Sobic008G189900--Sobic003G358900 Sobic003G222600 Sobic003G222600 Sobic001G114400--Sobic003G222600 Sobic001G114400--Sobic002G191100 Sobic001G114400--Sobic003G030400 Sobic001G114400--Sobic009G036300 Sobic004G070200 Sobic004G070200 Sobic001G114400--Sobic004G070200 Sobic001G114400--Sobic008G148400 Sobic001G114400--Sobic010G039200 Sobic003G324100 Sobic003G324100 Sobic001G114400--Sobic003G324100 Sobic010G211500 Sobic010G211500 Sobic001G114400--Sobic010G211500 Sobic002G191100--Sobic001G114400 Sobic002G181132 Sobic002G181132 Sobic002G191100--Sobic002G181132 Sobic003G162800 Sobic003G162800 Sobic002G191100--Sobic003G162800 Sobic008G038600 Sobic008G038600 Sobic002G191100--Sobic008G038600 Sobic003G039300 Sobic003G039300 Sobic002G191100--Sobic003G039300 Sobic003G345900 Sobic003G345900 Sobic002G191100--Sobic003G345900 Sobic007G137800 Sobic007G137800 Sobic002G191100--Sobic007G137800 Sobic009G214200 Sobic009G214200 Sobic002G191100--Sobic009G214200 Sobic002G191100--Sobic004G070200 Sobic004G296000--Sobic005G145300 Sobic004G296000--Sobic010G039200 Sobic004G296000--Sobic009G036300 Sobic004G296000--Sobic001G207200 Sobic004G296000--Sobic004G231600 Sobic004G296000--Sobic010G074200 Sobic004G144000 Sobic004G144000 Sobic004G296000--Sobic004G144000 Sobic004G296000--Sobic001G114400 Sobic007G227600 Sobic007G227600 Sobic004G296000--Sobic007G227600
Octagon: transcription factors


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