Gene annotation
Transcriptome id Sobic.004G296000.2,Sobic.004G296000.3,Sobic.004G296000.1
Synonym Sb04g032990
Functional annotation ceramide kinase-related, putative, expressed
UniProt A0A194YSD9
Pfam PF00781
Panther DB PTHR12358 PTHR12358:SF6
NCBI CDD KOG1115; Ceramide kinase
KEGG Orthology K04715; ceramide kinase
Gene Ontology GO:0016301; kinase activity


Orthologs (automatic annotation)
TAIR AT5G51290 : Diacylglycerol kinase family protein
RAP-DB (Rice) LOC_Os02g43906.1 : ceramide kinase-related, putative, expressed
MaizeGDB (Corn) Zm00025a032195
Brachypodium KQK00600 , KQK00599 , KQK00598
Barley HORVU6Hr1G062830.1 , HORVU6Hr1G062830.5 , HORVU6Hr1G062830.4 , HORVU6Hr1G062830.7 , HORVU6Hr1G062830.6 , HORVU6Hr1G062830.3 , HORVU6Hr1G062830.9 , HORVU6Hr1G062830.8 , HORVU6Hr1G062830.20 , HORVU6Hr1G062830.21 , HORVU6Hr1G062830.15 , HORVU6Hr1G062830.14 , HORVU6Hr1G062830.17 , HORVU6Hr1G062830.16 , HORVU6Hr1G062830.10 , HORVU6Hr1G062830.13 , HORVU6Hr1G062830.12 , HORVU6Hr1G062830.19 , HORVU6Hr1G062830.18 , HORVU6Hr1G062830.2
Wheat TraesCS6B02G280300 , TraesCS6B02G280300 , TraesCS6A02G244000 , TraesCS6B02G280300 , TraesCS6B02G280300 , TraesCS6B02G280300 , TraesCS6B02G280300 , TraesCS6D02G226300 , TraesCS6D02G226300 , TraesCS6D02G226300 , TraesCS6D02G226300 , TraesCS6A02G244000 , TraesCS6D02G226300 , TraesCS6D02G226300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G145300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBO10 - F-box and other domain containing protein, expressed K12116: flavin-binding kelch repeat F-box protein 1
2 Sobic.010G039200 cysteine synthase, putative, expressed K01738: cysteine synthase
3 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
4 Sobic.001G207200 MEE12, putative, expressed -
5 Sobic.004G231600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.010G074200 - -
7 Sobic.004G144000 - -
8 Sobic.001G114400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoribosylformylglycinamidine synthase, putative, expressed K01952: PFAS, phosphoribosylformylglycinamidine synthase
9 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
10 Sobic.009G062800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
11 Sobic.005G028900 cytochrome c-type biogenesis protein dbsD-like, putative, expressed -
12 Sobic.008G189900 NB-ARC domain containing protein, expressed -
13 Sobic.001G367500 arginyl-tRNA synthetase, putative, expressed -
14 Sobic.010G074100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1270, putative, expressed -
15 Sobic.010G215600 prenyltransferase, putative, expressed K09833: HPT, HGGT, homogentisate phytyltransferase / homogentisate geranylgeranyltransferase
16 Sobic.003G356100 CRR2, putative, expressed -
17 Sobic.009G094700 haloacid dehalogenase-like hydrolase family protein, putative, expressed -
18 Sobic.002G404200 F-box domain containing protein, expressed -
19 Sobic.006G089400 cleft lip and palate transmembrane protein 1, putative, expressed -
20 Sobic.004G250200 ORMM1(PubMedID : 24676859)@RNA recognition motif family protein, expressed -


Gene co-expression network
sample Sobic004G296000 Sobic004G296000 Sobic005G145300 Sobic005G145300 Sobic004G296000--Sobic005G145300 Sobic010G039200 Sobic010G039200 Sobic004G296000--Sobic010G039200 Sobic009G036300 Sobic009G036300 Sobic004G296000--Sobic009G036300 Sobic001G207200 Sobic001G207200 Sobic004G296000--Sobic001G207200 Sobic004G231600 Sobic004G231600 Sobic004G296000--Sobic004G231600 Sobic010G074200 Sobic010G074200 Sobic004G296000--Sobic010G074200 Sobic004G144000 Sobic004G144000 Sobic004G296000--Sobic004G144000 Sobic001G114400 Sobic001G114400 Sobic004G296000--Sobic001G114400 Sobic007G227600 Sobic007G227600 Sobic004G296000--Sobic007G227600 Sobic001G367500 Sobic001G367500 Sobic005G145300--Sobic001G367500 Sobic008G148400 Sobic008G148400 Sobic005G145300--Sobic008G148400 Sobic005G145300--Sobic004G296000 Sobic009G238100 Sobic009G238100 Sobic005G145300--Sobic009G238100 Sobic003G030400 Sobic003G030400 Sobic005G145300--Sobic003G030400 Sobic005G145300--Sobic001G114400 Sobic005G145300--Sobic009G036300 Sobic005G145300--Sobic010G074200 Sobic010G074100 Sobic010G074100 Sobic005G145300--Sobic010G074100 Sobic010G039200--Sobic001G114400 Sobic010G039200--Sobic005G145300 Sobic010G039200--Sobic004G296000 Sobic001G224200 Sobic001G224200 Sobic010G039200--Sobic001G224200 Sobic004G290000 Sobic004G290000 Sobic010G039200--Sobic004G290000 Sobic010G039200--Sobic001G207200 Sobic003G297800 Sobic003G297800 Sobic010G039200--Sobic003G297800 Sobic009G094700 Sobic009G094700 Sobic010G039200--Sobic009G094700 Sobic004G265900 Sobic004G265900 Sobic010G039200--Sobic004G265900 Sobic009G036300--Sobic007G227600 Sobic001G388400 Sobic001G388400 Sobic009G036300--Sobic001G388400 Sobic009G036300--Sobic010G074200 Sobic010G028000 Sobic010G028000 Sobic009G036300--Sobic010G028000 Sobic009G036300--Sobic010G074100 Sobic010G211500 Sobic010G211500 Sobic009G036300--Sobic010G211500 Sobic009G234200 Sobic009G234200 Sobic009G036300--Sobic009G234200 Sobic006G204100 Sobic006G204100 Sobic009G036300--Sobic006G204100 Sobic002G163700 Sobic002G163700 Sobic009G036300--Sobic002G163700 Sobic001G207200--Sobic010G211500 Sobic010G231100 Sobic010G231100 Sobic001G207200--Sobic010G231100 Sobic001G501300 Sobic001G501300 Sobic001G207200--Sobic001G501300 Sobic001G207200--Sobic009G036300 Sobic008G165900 Sobic008G165900 Sobic001G207200--Sobic008G165900 Sobic009G052700 Sobic009G052700 Sobic001G207200--Sobic009G052700 Sobic009G079950 Sobic009G079950 Sobic001G207200--Sobic009G079950 Sobic003G332900 Sobic003G332900 Sobic001G207200--Sobic003G332900 Sobic001G207200--Sobic001G224200 Sobic003G425100 Sobic003G425100 Sobic004G231600--Sobic003G425100 Sobic004G231600--Sobic003G332900 Sobic002G131000 Sobic002G131000 Sobic004G231600--Sobic002G131000 Sobic004G027300 Sobic004G027300 Sobic004G231600--Sobic004G027300 Sobic004G231600--Sobic008G165900 Sobic004G231600--Sobic001G207200 Sobic002G378100 Sobic002G378100 Sobic004G231600--Sobic002G378100 Sobic001G422500 Sobic001G422500 Sobic004G231600--Sobic001G422500 Sobic006G128400 Sobic006G128400 Sobic004G231600--Sobic006G128400 Sobic010G074200--Sobic006G204100 Sobic010G074200--Sobic010G074100 Sobic010G074200--Sobic001G388400 Sobic009G233800 Sobic009G233800 Sobic010G074200--Sobic009G233800 Sobic010G074200--Sobic009G036300 Sobic010G074200--Sobic010G028000 Sobic010G074200--Sobic007G227600 Sobic010G074200--Sobic009G234200 Sobic003G330100 Sobic003G330100 Sobic010G074200--Sobic003G330100 Sobic005G028900 Sobic005G028900 Sobic004G144000--Sobic005G028900 Sobic003G334100 Sobic003G334100 Sobic004G144000--Sobic003G334100 Sobic004G250200 Sobic004G250200 Sobic004G144000--Sobic004G250200 Sobic004G333400 Sobic004G333400 Sobic004G144000--Sobic004G333400 Sobic010G183400 Sobic010G183400 Sobic004G144000--Sobic010G183400 Sobic003G084500 Sobic003G084500 Sobic004G144000--Sobic003G084500 Sobic003G444500 Sobic003G444500 Sobic004G144000--Sobic003G444500 Sobic002G181000 Sobic002G181000 Sobic004G144000--Sobic002G181000 Sobic004G144000--Sobic004G265900 Sobic003G222600 Sobic003G222600 Sobic001G114400--Sobic003G222600 Sobic002G191100 Sobic002G191100 Sobic001G114400--Sobic002G191100 Sobic001G114400--Sobic003G030400 Sobic001G114400--Sobic009G036300 Sobic004G070200 Sobic004G070200 Sobic001G114400--Sobic004G070200 Sobic001G114400--Sobic008G148400 Sobic001G114400--Sobic010G039200 Sobic003G324100 Sobic003G324100 Sobic001G114400--Sobic003G324100 Sobic001G114400--Sobic010G211500 Sobic007G227600--Sobic010G074100 Sobic007G227600--Sobic009G036300 Sobic007G227600--Sobic001G388400 Sobic007G227600--Sobic009G234200 Sobic007G227600--Sobic010G028000 Sobic007G227600--Sobic010G074200 Sobic009G253000 Sobic009G253000 Sobic007G227600--Sobic009G253000 Sobic007G227600--Sobic010G211500 Sobic007G227600--Sobic002G163700
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.