Gene annotation
Transcriptome id Sobic.001G367500.2
Synonym
Functional annotation arginyl-tRNA synthetase, putative, expressed
UniProt A0A1Z5SA14
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g07030.1 : arginyl-tRNA synthetase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G145300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBO10 - F-box and other domain containing protein, expressed K12116: flavin-binding kelch repeat F-box protein 1
2 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
3 Sobic.009G036300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@mitochondrial carrier protein, putative, expressed K13354: SLC25A17, solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17
4 Sobic.006G186000 CYP704A3(Ortholog in rice:Tang et al. (2016))(PubMedID : 31659899)@cytochrome P450, putative, expressed -
5 Sobic.003G332900 expressed protein K14404: CPSF4, cleavage and polyadenylation specificity factor subunit 4
6 Sobic.010G074100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@EMB1270, putative, expressed -
7 Sobic.008G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein DSP1, putative, expressed -
8 Sobic.003G030400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA binding protein, putative, expressed K11145: ribonuclease III family protein
9 Sobic.010G074200 - -
10 Sobic.001G341800 von Willebrand factor type A domain containing protein, expressed -
11 Sobic.009G062800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transketolase, chloroplast precursor, putative, expressed K00615: E2.2.1.1, tktA, transketolase
12 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
13 Sobic.002G206500 queuine tRNA-ribosyltransferase, putative, expressed K00773: tgt, queuine tRNA-ribosyltransferase
14 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
15 Sobic.003G208300 PPR repeat domain containing protein, putative, expressed -
16 Sobic.007G227600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
17 Sobic.009G032100 nitrogen regulatory protein P-II, putative, expressed -
18 Sobic.009G253000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA polymerase sigma factor, putative, expressed -
19 Sobic.001G207200 MEE12, putative, expressed -
20 Sobic.001G114400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphoribosylformylglycinamidine synthase, putative, expressed K01952: PFAS, phosphoribosylformylglycinamidine synthase


Gene co-expression network
sample Sobic001G367500 Sobic001G367500 Sobic005G145300 Sobic005G145300 Sobic001G367500--Sobic005G145300 Sobic009G238100 Sobic009G238100 Sobic001G367500--Sobic009G238100 Sobic009G036300 Sobic009G036300 Sobic001G367500--Sobic009G036300 Sobic006G186000 Sobic006G186000 Sobic001G367500--Sobic006G186000 Sobic003G332900 Sobic003G332900 Sobic001G367500--Sobic003G332900 Sobic010G074100 Sobic010G074100 Sobic001G367500--Sobic010G074100 Sobic008G148400 Sobic008G148400 Sobic001G367500--Sobic008G148400 Sobic003G030400 Sobic003G030400 Sobic001G367500--Sobic003G030400 Sobic010G074200 Sobic010G074200 Sobic001G367500--Sobic010G074200 Sobic005G145300--Sobic001G367500 Sobic005G145300--Sobic008G148400 Sobic004G296000 Sobic004G296000 Sobic005G145300--Sobic004G296000 Sobic005G145300--Sobic009G238100 Sobic005G145300--Sobic003G030400 Sobic001G114400 Sobic001G114400 Sobic005G145300--Sobic001G114400 Sobic005G145300--Sobic009G036300 Sobic005G145300--Sobic010G074200 Sobic005G145300--Sobic010G074100 Sobic009G238100--Sobic008G148400 Sobic001G426400 Sobic001G426400 Sobic009G238100--Sobic001G426400 Sobic009G253000 Sobic009G253000 Sobic009G238100--Sobic009G253000 Sobic001G179100 Sobic001G179100 Sobic009G238100--Sobic001G179100 Sobic005G169600 Sobic005G169600 Sobic009G238100--Sobic005G169600 Sobic009G238100--Sobic009G036300 Sobic009G238100--Sobic003G030400 Sobic007G227600 Sobic007G227600 Sobic009G238100--Sobic007G227600 Sobic002G038300 Sobic002G038300 Sobic009G238100--Sobic002G038300 Sobic009G036300--Sobic007G227600 Sobic001G388400 Sobic001G388400 Sobic009G036300--Sobic001G388400 Sobic009G036300--Sobic010G074200 Sobic010G028000 Sobic010G028000 Sobic009G036300--Sobic010G028000 Sobic009G036300--Sobic010G074100 Sobic010G211500 Sobic010G211500 Sobic009G036300--Sobic010G211500 Sobic009G234200 Sobic009G234200 Sobic009G036300--Sobic009G234200 Sobic006G204100 Sobic006G204100 Sobic009G036300--Sobic006G204100 Sobic002G163700 Sobic002G163700 Sobic009G036300--Sobic002G163700 Sobic006G186000--Sobic001G367500 Sobic003G237000 Sobic003G237000 Sobic006G186000--Sobic003G237000 Sobic002G287000 Sobic002G287000 Sobic006G186000--Sobic002G287000 Sobic009G032100 Sobic009G032100 Sobic006G186000--Sobic009G032100 Sobic003G222300 Sobic003G222300 Sobic006G186000--Sobic003G222300 Sobic007G029100 Sobic007G029100 Sobic006G186000--Sobic007G029100 Sobic010G113000 Sobic010G113000 Sobic006G186000--Sobic010G113000 Sobic002G195700 Sobic002G195700 Sobic006G186000--Sobic002G195700 Sobic009G255100 Sobic009G255100 Sobic006G186000--Sobic009G255100 Sobic008G165900 Sobic008G165900 Sobic003G332900--Sobic008G165900 Sobic003G332900--Sobic010G211500 Sobic004G231600 Sobic004G231600 Sobic003G332900--Sobic004G231600 Sobic001G207200 Sobic001G207200 Sobic003G332900--Sobic001G207200 Sobic008G022701 Sobic008G022701 Sobic003G332900--Sobic008G022701 Sobic002G131000 Sobic002G131000 Sobic003G332900--Sobic002G131000 Sobic001G224200 Sobic001G224200 Sobic003G332900--Sobic001G224200 Sobic003G332900--Sobic009G238100 Sobic006G128400 Sobic006G128400 Sobic003G332900--Sobic006G128400 Sobic010G074100--Sobic007G227600 Sobic010G074100--Sobic010G074200 Sobic010G074100--Sobic009G036300 Sobic010G074100--Sobic001G388400 Sobic010G074100--Sobic010G028000 Sobic009G233800 Sobic009G233800 Sobic010G074100--Sobic009G233800 Sobic010G074100--Sobic010G211500 Sobic010G074100--Sobic009G253000 Sobic009G062800 Sobic009G062800 Sobic010G074100--Sobic009G062800 Sobic008G148400--Sobic009G238100 Sobic008G148400--Sobic001G426400 Sobic008G148400--Sobic003G030400 Sobic003G222600 Sobic003G222600 Sobic008G148400--Sobic003G222600 Sobic001G423100 Sobic001G423100 Sobic008G148400--Sobic001G423100 Sobic009G154600 Sobic009G154600 Sobic008G148400--Sobic009G154600 Sobic007G131200 Sobic007G131200 Sobic008G148400--Sobic007G131200 Sobic008G148400--Sobic009G233800 Sobic006G265400 Sobic006G265400 Sobic008G148400--Sobic006G265400 Sobic003G030400--Sobic003G222600 Sobic003G030400--Sobic008G148400 Sobic003G030400--Sobic009G233800 Sobic001G076200 Sobic001G076200 Sobic003G030400--Sobic001G076200 Sobic003G030400--Sobic009G238100 Sobic009G137000 Sobic009G137000 Sobic003G030400--Sobic009G137000 Sobic003G030400--Sobic001G114400 Sobic004G070200 Sobic004G070200 Sobic003G030400--Sobic004G070200 Sobic004G249500 Sobic004G249500 Sobic003G030400--Sobic004G249500 Sobic010G074200--Sobic006G204100 Sobic010G074200--Sobic010G074100 Sobic010G074200--Sobic001G388400 Sobic010G074200--Sobic009G233800 Sobic010G074200--Sobic009G036300 Sobic010G074200--Sobic010G028000 Sobic010G074200--Sobic007G227600 Sobic010G074200--Sobic009G234200 Sobic003G330100 Sobic003G330100 Sobic010G074200--Sobic003G330100
Octagon: transcription factors


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