Gene annotation
Transcriptome id Sobic.009G032100.1,Sobic.009G032100.2
Synonym PII, Sb09g002690, GLB1
Functional annotation nitrogen regulatory protein P-II, putative, expressed
UniProt C5YZI0 , A0A1B6P6H3
Pfam PF00543
Panther DB PTHR30115 PTHR30115:SF11
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006808; regulation of nitrogen utilization


Orthologs (automatic annotation)
TAIR AT4G01900 : GLNB1 homolog
RAP-DB (Rice) LOC_Os05g04220.1 : nitrogen regulatory protein P-II, putative, expressed
MaizeGDB (Corn) -
Brachypodium KQK07950
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G426400 expressed protein -
2 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
3 Sobic.008G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein DSP1, putative, expressed -
4 Sobic.006G186000 CYP704A3(Ortholog in rice:Tang et al. (2016))(PubMedID : 31659899)@cytochrome P450, putative, expressed -
5 Sobic.006G265400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
6 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
7 Sobic.001G367500 arginyl-tRNA synthetase, putative, expressed -
8 Sobic.005G145300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBO10 - F-box and other domain containing protein, expressed K12116: flavin-binding kelch repeat F-box protein 1
9 Sobic.003G030400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA binding protein, putative, expressed K11145: ribonuclease III family protein
10 Sobic.002G206500 queuine tRNA-ribosyltransferase, putative, expressed K00773: tgt, queuine tRNA-ribosyltransferase
11 Sobic.005G169600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
12 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
13 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
14 Sobic.006G279800 expressed protein -
15 Sobic.008G109200 - -
16 Sobic.001G485600 DAG protein, chloroplast precursor, putative, expressed -
17 Sobic.001G141300 RNA recognition motif containing protein, expressed -
18 Sobic.001G394700 fip1 motif family protein, expressed -
19 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.003G053900 zinc finger, C3HC4 type family protein, expressed -


Gene co-expression network
sample Sobic009G032100 Sobic009G032100 Sobic001G426400 Sobic001G426400 Sobic009G032100--Sobic001G426400 Sobic009G238100 Sobic009G238100 Sobic009G032100--Sobic009G238100 Sobic008G148400 Sobic008G148400 Sobic009G032100--Sobic008G148400 Sobic006G186000 Sobic006G186000 Sobic009G032100--Sobic006G186000 Sobic006G265400 Sobic006G265400 Sobic009G032100--Sobic006G265400 Sobic001G423100 Sobic001G423100 Sobic009G032100--Sobic001G423100 Sobic001G367500 Sobic001G367500 Sobic009G032100--Sobic001G367500 Sobic005G145300 Sobic005G145300 Sobic009G032100--Sobic005G145300 Sobic003G030400 Sobic003G030400 Sobic009G032100--Sobic003G030400 Sobic001G426400--Sobic006G265400 Sobic001G426400--Sobic008G148400 Sobic001G426400--Sobic009G238100 Sobic001G426400--Sobic009G032100 Sobic004G249500 Sobic004G249500 Sobic001G426400--Sobic004G249500 Sobic003G255100 Sobic003G255100 Sobic001G426400--Sobic003G255100 Sobic001G426400--Sobic003G030400 Sobic007G060900 Sobic007G060900 Sobic001G426400--Sobic007G060900 Sobic007G131200 Sobic007G131200 Sobic001G426400--Sobic007G131200 Sobic009G238100--Sobic008G148400 Sobic009G238100--Sobic001G426400 Sobic009G253000 Sobic009G253000 Sobic009G238100--Sobic009G253000 Sobic001G179100 Sobic001G179100 Sobic009G238100--Sobic001G179100 Sobic005G169600 Sobic005G169600 Sobic009G238100--Sobic005G169600 Sobic009G036300 Sobic009G036300 Sobic009G238100--Sobic009G036300 Sobic009G238100--Sobic003G030400 Sobic007G227600 Sobic007G227600 Sobic009G238100--Sobic007G227600 Sobic002G038300 Sobic002G038300 Sobic009G238100--Sobic002G038300 Sobic008G148400--Sobic009G238100 Sobic008G148400--Sobic001G426400 Sobic008G148400--Sobic003G030400 Sobic003G222600 Sobic003G222600 Sobic008G148400--Sobic003G222600 Sobic008G148400--Sobic001G423100 Sobic009G154600 Sobic009G154600 Sobic008G148400--Sobic009G154600 Sobic008G148400--Sobic007G131200 Sobic009G233800 Sobic009G233800 Sobic008G148400--Sobic009G233800 Sobic008G148400--Sobic006G265400 Sobic006G186000--Sobic001G367500 Sobic003G237000 Sobic003G237000 Sobic006G186000--Sobic003G237000 Sobic002G287000 Sobic002G287000 Sobic006G186000--Sobic002G287000 Sobic006G186000--Sobic009G032100 Sobic003G222300 Sobic003G222300 Sobic006G186000--Sobic003G222300 Sobic007G029100 Sobic007G029100 Sobic006G186000--Sobic007G029100 Sobic010G113000 Sobic010G113000 Sobic006G186000--Sobic010G113000 Sobic002G195700 Sobic002G195700 Sobic006G186000--Sobic002G195700 Sobic009G255100 Sobic009G255100 Sobic006G186000--Sobic009G255100 Sobic006G265400--Sobic001G426400 Sobic006G265400--Sobic008G148400 Sobic006G265400--Sobic009G238100 Sobic006G265400--Sobic007G131200 Sobic006G265400--Sobic007G060900 Sobic001G141300 Sobic001G141300 Sobic006G265400--Sobic001G141300 Sobic009G197000 Sobic009G197000 Sobic006G265400--Sobic009G197000 Sobic001G255400 Sobic001G255400 Sobic006G265400--Sobic001G255400 Sobic010G143400 Sobic010G143400 Sobic006G265400--Sobic010G143400 Sobic001G423100--Sobic009G154600 Sobic001G423100--Sobic008G148400 Sobic001G191200 Sobic001G191200 Sobic001G423100--Sobic001G191200 Sobic003G406700 Sobic003G406700 Sobic001G423100--Sobic003G406700 Sobic001G078200 Sobic001G078200 Sobic001G423100--Sobic001G078200 Sobic001G031300 Sobic001G031300 Sobic001G423100--Sobic001G031300 Sobic006G279800 Sobic006G279800 Sobic001G423100--Sobic006G279800 Sobic010G258300 Sobic010G258300 Sobic001G423100--Sobic010G258300 Sobic001G423100--Sobic003G030400 Sobic001G367500--Sobic005G145300 Sobic001G367500--Sobic009G238100 Sobic001G367500--Sobic009G036300 Sobic001G367500--Sobic006G186000 Sobic003G332900 Sobic003G332900 Sobic001G367500--Sobic003G332900 Sobic010G074100 Sobic010G074100 Sobic001G367500--Sobic010G074100 Sobic001G367500--Sobic008G148400 Sobic001G367500--Sobic003G030400 Sobic010G074200 Sobic010G074200 Sobic001G367500--Sobic010G074200 Sobic005G145300--Sobic001G367500 Sobic005G145300--Sobic008G148400 Sobic004G296000 Sobic004G296000 Sobic005G145300--Sobic004G296000 Sobic005G145300--Sobic009G238100 Sobic005G145300--Sobic003G030400 Sobic001G114400 Sobic001G114400 Sobic005G145300--Sobic001G114400 Sobic005G145300--Sobic009G036300 Sobic005G145300--Sobic010G074200 Sobic005G145300--Sobic010G074100 Sobic003G030400--Sobic003G222600 Sobic003G030400--Sobic008G148400 Sobic003G030400--Sobic009G233800 Sobic001G076200 Sobic001G076200 Sobic003G030400--Sobic001G076200 Sobic003G030400--Sobic009G238100 Sobic009G137000 Sobic009G137000 Sobic003G030400--Sobic009G137000 Sobic003G030400--Sobic001G114400 Sobic004G070200 Sobic004G070200 Sobic003G030400--Sobic004G070200 Sobic003G030400--Sobic004G249500
Octagon: transcription factors


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