Gene annotation
Transcriptome id Sobic.001G394700.1
Synonym
Functional annotation fip1 motif family protein, expressed
UniProt A0A1B6QNP2
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os03g19570.1 : fip1 motif family protein, expressed
MaizeGDB (Corn) Zm00025a002158
Brachypodium PNT77532
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G022701 - K17710: pentatricopeptide repeat domain-containing protein 1
2 Sobic.008G137800 expressed protein -
3 Sobic.009G032100 nitrogen regulatory protein P-II, putative, expressed -
4 Sobic.001G426400 expressed protein -
5 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
6 Sobic.001G367500 arginyl-tRNA synthetase, putative, expressed -
7 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
8 Sobic.005G169600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplastic group IIA intron splicing facilitator CRS1, chloroplast precursor, putative, expressed -
9 Sobic.010G079700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
10 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
11 Sobic.002G155900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.006G265400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@heat shock protein DnaJ, putative, expressed -
13 Sobic.003G381400 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed -
14 Sobic.009G041600 CRS1/YhbY domain containing protein, putative, expressed -
15 Sobic.006G135200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
16 Sobic.003G151800 expressed protein -
17 Sobic.003G332900 expressed protein K14404: CPSF4, cleavage and polyadenylation specificity factor subunit 4
18 Sobic.003G208300 PPR repeat domain containing protein, putative, expressed -
19 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.002G206500 queuine tRNA-ribosyltransferase, putative, expressed K00773: tgt, queuine tRNA-ribosyltransferase


Gene co-expression network
sample Sobic001G394700 Sobic001G394700 Sobic008G022701 Sobic008G022701 Sobic001G394700--Sobic008G022701 Sobic008G137800 Sobic008G137800 Sobic001G394700--Sobic008G137800 Sobic009G032100 Sobic009G032100 Sobic001G394700--Sobic009G032100 Sobic001G426400 Sobic001G426400 Sobic001G394700--Sobic001G426400 Sobic001G179100 Sobic001G179100 Sobic001G394700--Sobic001G179100 Sobic001G367500 Sobic001G367500 Sobic001G394700--Sobic001G367500 Sobic009G238100 Sobic009G238100 Sobic001G394700--Sobic009G238100 Sobic005G169600 Sobic005G169600 Sobic001G394700--Sobic005G169600 Sobic010G079700 Sobic010G079700 Sobic001G394700--Sobic010G079700 Sobic003G332900 Sobic003G332900 Sobic008G022701--Sobic003G332900 Sobic001G008000 Sobic001G008000 Sobic008G022701--Sobic001G008000 Sobic001G119600 Sobic001G119600 Sobic008G022701--Sobic001G119600 Sobic002G052400 Sobic002G052400 Sobic008G022701--Sobic002G052400 Sobic007G145100 Sobic007G145100 Sobic008G022701--Sobic007G145100 Sobic005G100900 Sobic005G100900 Sobic008G022701--Sobic005G100900 Sobic001G157300 Sobic001G157300 Sobic008G022701--Sobic001G157300 Sobic001G502600 Sobic001G502600 Sobic008G022701--Sobic001G502600 Sobic004G027300 Sobic004G027300 Sobic008G022701--Sobic004G027300 Sobic003G214000 Sobic003G214000 Sobic008G137800--Sobic003G214000 Sobic004G078600 Sobic004G078600 Sobic008G137800--Sobic004G078600 Sobic001G145050 Sobic001G145050 Sobic008G137800--Sobic001G145050 Sobic008G137800--Sobic001G179100 Sobic001G315800 Sobic001G315800 Sobic008G137800--Sobic001G315800 Sobic009G152400 Sobic009G152400 Sobic008G137800--Sobic009G152400 Sobic003G402200 Sobic003G402200 Sobic008G137800--Sobic003G402200 Sobic004G068700 Sobic004G068700 Sobic008G137800--Sobic004G068700 Sobic006G060800 Sobic006G060800 Sobic008G137800--Sobic006G060800 Sobic009G032100--Sobic001G426400 Sobic009G032100--Sobic009G238100 Sobic008G148400 Sobic008G148400 Sobic009G032100--Sobic008G148400 Sobic006G186000 Sobic006G186000 Sobic009G032100--Sobic006G186000 Sobic006G265400 Sobic006G265400 Sobic009G032100--Sobic006G265400 Sobic001G423100 Sobic001G423100 Sobic009G032100--Sobic001G423100 Sobic009G032100--Sobic001G367500 Sobic005G145300 Sobic005G145300 Sobic009G032100--Sobic005G145300 Sobic003G030400 Sobic003G030400 Sobic009G032100--Sobic003G030400 Sobic001G426400--Sobic006G265400 Sobic001G426400--Sobic008G148400 Sobic001G426400--Sobic009G238100 Sobic001G426400--Sobic009G032100 Sobic004G249500 Sobic004G249500 Sobic001G426400--Sobic004G249500 Sobic003G255100 Sobic003G255100 Sobic001G426400--Sobic003G255100 Sobic001G426400--Sobic003G030400 Sobic007G060900 Sobic007G060900 Sobic001G426400--Sobic007G060900 Sobic007G131200 Sobic007G131200 Sobic001G426400--Sobic007G131200 Sobic001G179100--Sobic004G068700 Sobic001G179100--Sobic003G214000 Sobic002G155900 Sobic002G155900 Sobic001G179100--Sobic002G155900 Sobic002G287000 Sobic002G287000 Sobic001G179100--Sobic002G287000 Sobic001G179100--Sobic009G238100 Sobic001G179100--Sobic003G255100 Sobic001G161300 Sobic001G161300 Sobic001G179100--Sobic001G161300 Sobic008G111300 Sobic008G111300 Sobic001G179100--Sobic008G111300 Sobic002G366100 Sobic002G366100 Sobic001G179100--Sobic002G366100 Sobic001G367500--Sobic005G145300 Sobic001G367500--Sobic009G238100 Sobic009G036300 Sobic009G036300 Sobic001G367500--Sobic009G036300 Sobic001G367500--Sobic006G186000 Sobic001G367500--Sobic003G332900 Sobic010G074100 Sobic010G074100 Sobic001G367500--Sobic010G074100 Sobic001G367500--Sobic008G148400 Sobic001G367500--Sobic003G030400 Sobic010G074200 Sobic010G074200 Sobic001G367500--Sobic010G074200 Sobic009G238100--Sobic008G148400 Sobic009G238100--Sobic001G426400 Sobic009G253000 Sobic009G253000 Sobic009G238100--Sobic009G253000 Sobic009G238100--Sobic001G179100 Sobic009G238100--Sobic005G169600 Sobic009G238100--Sobic009G036300 Sobic009G238100--Sobic003G030400 Sobic007G227600 Sobic007G227600 Sobic009G238100--Sobic007G227600 Sobic002G038300 Sobic002G038300 Sobic009G238100--Sobic002G038300 Sobic005G169600--Sobic009G238100 Sobic006G204100 Sobic006G204100 Sobic005G169600--Sobic006G204100 Sobic005G169600--Sobic009G036300 Sobic005G169600--Sobic007G227600 Sobic003G342700 Sobic003G342700 Sobic005G169600--Sobic003G342700 Sobic005G169600--Sobic002G038300 Sobic002G404900 Sobic002G404900 Sobic005G169600--Sobic002G404900 Sobic009G234200 Sobic009G234200 Sobic005G169600--Sobic009G234200 Sobic005G169600--Sobic003G030400 Sobic010G079700--Sobic003G255100 Sobic001G030500 Sobic001G030500 Sobic010G079700--Sobic001G030500 Sobic006G269400 Sobic006G269400 Sobic010G079700--Sobic006G269400 Sobic010G079700--Sobic002G155900 Sobic001G093600 Sobic001G093600 Sobic010G079700--Sobic001G093600 Sobic010G079700--Sobic002G287000 Sobic010G079700--Sobic001G179100 Sobic001G005500 Sobic001G005500 Sobic010G079700--Sobic001G005500 Sobic002G271600 Sobic002G271600 Sobic010G079700--Sobic002G271600
Octagon: transcription factors


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