Gene annotation
Transcriptome id Sobic.002G155900.1
Synonym Sb02g019490
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt A0A1B6QBL5
Pfam PF02878 PF02879 PF02880
Panther DB PTHR22573:SF32 PTHR22573
NCBI CDD KOG1220; Phosphoglucomutase/phosphomannomutase
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0016868intramolecular transferase activity, phosphotransferases


Orthologs (automatic annotation)
TAIR AT1G70820 : phosphoglucomutase, putative / glucose phosphomutase, putative
RAP-DB (Rice) LOC_Os06g28194.1 : expressed protein
MaizeGDB (Corn) Zm00025a046280
Brachypodium KQK18364
Barley HORVU7Hr1G082990.1 , HORVU7Hr1G082990.2 , HORVU7Hr1G082990.5 , HORVU7Hr1G082990.4
Wheat TraesCS7D02G344700 , TraesCS7B02G248500 , TraesCS7A02G337000
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
2 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
4 Sobic.006G152500 - -
5 Sobic.010G079700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
6 Sobic.009G085900 aquaporin protein, putative, expressed K09873: aquaporin TIP
7 Sobic.001G410450 - -
8 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
9 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
10 Sobic.003G065600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
11 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
12 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
13 Sobic.007G014600 transferase family protein, putative, expressed -
14 Sobic.001G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@indole-3-glycerol phosphate lyase, chloroplast precursor, putative, expressed K13222: BX1, indole-3-glycerol-phosphate lyase
15 Sobic.005G182701 - -
16 Sobic.001G012000 cytochrome P450 71E1, putative, expressed K13029: 4-hydroxyphenylacetaldehyde oxime monooxygenase
17 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
18 Sobic.K044407 - -
19 Sobic.002G423600 "Expressed in drought, cold and heat"(PubMedID : 29862293)@similar to WSI76 protein induced by water stress(PubMedID : 29862293)@glycosyl transferase 8 domain containing protein, putative, expressed K18819: inositol 3-alpha-galactosyltransferase
20 Sobic.001G426400 expressed protein -


Gene co-expression network
sample Sobic002G155900 Sobic002G155900 Sobic001G179100 Sobic001G179100 Sobic002G155900--Sobic001G179100 Sobic003G255100 Sobic003G255100 Sobic002G155900--Sobic003G255100 Sobic003G214000 Sobic003G214000 Sobic002G155900--Sobic003G214000 Sobic006G152500 Sobic006G152500 Sobic002G155900--Sobic006G152500 Sobic010G079700 Sobic010G079700 Sobic002G155900--Sobic010G079700 Sobic009G085900 Sobic009G085900 Sobic002G155900--Sobic009G085900 Sobic001G410450 Sobic001G410450 Sobic002G155900--Sobic001G410450 Sobic004G217700 Sobic004G217700 Sobic002G155900--Sobic004G217700 Sobic002G287000 Sobic002G287000 Sobic002G155900--Sobic002G287000 Sobic004G068700 Sobic004G068700 Sobic001G179100--Sobic004G068700 Sobic001G179100--Sobic003G214000 Sobic001G179100--Sobic002G155900 Sobic001G179100--Sobic002G287000 Sobic009G238100 Sobic009G238100 Sobic001G179100--Sobic009G238100 Sobic001G179100--Sobic003G255100 Sobic001G161300 Sobic001G161300 Sobic001G179100--Sobic001G161300 Sobic008G111300 Sobic008G111300 Sobic001G179100--Sobic008G111300 Sobic002G366100 Sobic002G366100 Sobic001G179100--Sobic002G366100 Sobic003G255100--Sobic010G079700 Sobic001G093600 Sobic001G093600 Sobic003G255100--Sobic001G093600 Sobic003G255100--Sobic002G155900 Sobic001G005500 Sobic001G005500 Sobic003G255100--Sobic001G005500 Sobic003G255100--Sobic001G179100 Sobic001G030500 Sobic001G030500 Sobic003G255100--Sobic001G030500 Sobic006G269400 Sobic006G269400 Sobic003G255100--Sobic006G269400 Sobic003G255100--Sobic002G287000 Sobic007G191900 Sobic007G191900 Sobic003G255100--Sobic007G191900 Sobic003G214000--Sobic001G179100 Sobic003G214000--Sobic004G068700 Sobic004G078600 Sobic004G078600 Sobic003G214000--Sobic004G078600 Sobic003G214000--Sobic002G155900 Sobic001G320700 Sobic001G320700 Sobic003G214000--Sobic001G320700 Sobic008G137800 Sobic008G137800 Sobic003G214000--Sobic008G137800 Sobic009G075100 Sobic009G075100 Sobic003G214000--Sobic009G075100 Sobic001G201800 Sobic001G201800 Sobic003G214000--Sobic001G201800 Sobic003G214000--Sobic008G111300 Sobic006G152500--Sobic001G410450 Sobic006G152500--Sobic002G155900 Sobic007G014600 Sobic007G014600 Sobic006G152500--Sobic007G014600 SobicK020500 SobicK020500 Sobic006G152500--SobicK020500 Sobic007G055600 Sobic007G055600 Sobic006G152500--Sobic007G055600 Sobic007G076000 Sobic007G076000 Sobic006G152500--Sobic007G076000 Sobic005G182701 Sobic005G182701 Sobic006G152500--Sobic005G182701 Sobic001G432500 Sobic001G432500 Sobic006G152500--Sobic001G432500 Sobic001G125700 Sobic001G125700 Sobic006G152500--Sobic001G125700 Sobic010G079700--Sobic003G255100 Sobic010G079700--Sobic001G030500 Sobic010G079700--Sobic006G269400 Sobic010G079700--Sobic002G155900 Sobic010G079700--Sobic001G093600 Sobic010G079700--Sobic002G287000 Sobic010G079700--Sobic001G179100 Sobic010G079700--Sobic001G005500 Sobic002G271600 Sobic002G271600 Sobic010G079700--Sobic002G271600 Sobic009G085900--Sobic002G155900 Sobic009G085900--Sobic003G255100 Sobic009G085900--Sobic002G271600 Sobic009G085900--Sobic010G079700 Sobic009G085900--Sobic002G287000 Sobic001G426400 Sobic001G426400 Sobic009G085900--Sobic001G426400 Sobic006G053700 Sobic006G053700 Sobic009G085900--Sobic006G053700 Sobic003G065600 Sobic003G065600 Sobic009G085900--Sobic003G065600 Sobic008G148400 Sobic008G148400 Sobic009G085900--Sobic008G148400 Sobic001G056400 Sobic001G056400 Sobic001G410450--Sobic001G056400 Sobic001G012000 Sobic001G012000 Sobic001G410450--Sobic001G012000 Sobic001G410450--Sobic005G182701 SobicK044407 SobicK044407 Sobic001G410450--SobicK044407 Sobic002G423600 Sobic002G423600 Sobic001G410450--Sobic002G423600 Sobic001G410450--Sobic007G055600 Sobic001G410450--Sobic004G217700 Sobic006G045000 Sobic006G045000 Sobic001G410450--Sobic006G045000 Sobic001G410450--Sobic007G076000 Sobic004G217700--Sobic002G423600 Sobic001G056500 Sobic001G056500 Sobic004G217700--Sobic001G056500 Sobic004G217700--Sobic001G056400 Sobic003G378301 Sobic003G378301 Sobic004G217700--Sobic003G378301 Sobic004G217700--Sobic005G182701 Sobic004G217700--SobicK044407 Sobic004G217700--Sobic006G045000 Sobic004G217700--Sobic001G410450 Sobic002G041800 Sobic002G041800 Sobic004G217700--Sobic002G041800 Sobic002G287000--Sobic004G068700 Sobic002G287000--Sobic001G179100 Sobic002G287000--Sobic003G255100 Sobic002G287000--Sobic002G366100 Sobic001G321600 Sobic001G321600 Sobic002G287000--Sobic001G321600 Sobic002G287000--Sobic003G214000 Sobic002G287000--Sobic001G005500 Sobic002G287000--Sobic009G238100 Sobic002G195700 Sobic002G195700 Sobic002G287000--Sobic002G195700
Octagon: transcription factors


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