Gene annotation
Transcriptome id Sobic.003G255100.1
Synonym Sb03g031010
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
expressed protein
UniProt C5XGN2
Pfam -
Panther DB PTHR36719
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G51100 : -
RAP-DB (Rice) LOC_Os01g48500.1 : expressed protein
MaizeGDB (Corn) Zm00025a028065
Brachypodium KQK09172
Barley HORVU3Hr1G062250.1 , HORVU3Hr1G062250.2
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.003G255100


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G079700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
2 Sobic.001G093600 - -
3 Sobic.002G155900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
5 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
6 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
7 Sobic.006G269400 expressed protein -
8 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
9 Sobic.007G191900 ACT domain containing protein, expressed -
10 Sobic.007G014600 transferase family protein, putative, expressed -
11 Sobic.001G452700 serine/threonine-protein kinase receptor precursor, putative, expressed -
12 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
13 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
14 Sobic.001G321600 dehydration response related protein, putative, expressed -
15 Sobic.002G195700 Cinnamyl alcohol dehydrogenase(PubMedID : 28606901)@Cinnamyl alcohol dehydrogenase(PubMedID : 19087955)@dehydrogenase, putative, expressed K00083: cinnamyl-alcohol dehydrogenase
16 Sobic.005G089000 gibberellin receptor GID1L2, putative, expressed -
17 Sobic.003G065600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
18 Sobic.010G182800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@lectin-like receptor kinase 1, putative, expressed -
19 Sobic.006G053700 ACT domain containing protein, expressed -
20 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -


Gene co-expression network
sample Sobic003G255100 Sobic003G255100 Sobic010G079700 Sobic010G079700 Sobic003G255100--Sobic010G079700 Sobic001G093600 Sobic001G093600 Sobic003G255100--Sobic001G093600 Sobic002G155900 Sobic002G155900 Sobic003G255100--Sobic002G155900 Sobic001G005500 Sobic001G005500 Sobic003G255100--Sobic001G005500 Sobic001G179100 Sobic001G179100 Sobic003G255100--Sobic001G179100 Sobic001G030500 Sobic001G030500 Sobic003G255100--Sobic001G030500 Sobic006G269400 Sobic006G269400 Sobic003G255100--Sobic006G269400 Sobic002G287000 Sobic002G287000 Sobic003G255100--Sobic002G287000 Sobic007G191900 Sobic007G191900 Sobic003G255100--Sobic007G191900 Sobic010G079700--Sobic003G255100 Sobic010G079700--Sobic001G030500 Sobic010G079700--Sobic006G269400 Sobic010G079700--Sobic002G155900 Sobic010G079700--Sobic001G093600 Sobic010G079700--Sobic002G287000 Sobic010G079700--Sobic001G179100 Sobic010G079700--Sobic001G005500 Sobic002G271600 Sobic002G271600 Sobic010G079700--Sobic002G271600 Sobic003G107300 Sobic003G107300 Sobic001G093600--Sobic003G107300 Sobic006G273000 Sobic006G273000 Sobic001G093600--Sobic006G273000 Sobic001G093600--Sobic001G005500 Sobic001G275200 Sobic001G275200 Sobic001G093600--Sobic001G275200 Sobic001G093600--Sobic003G255100 Sobic007G179750 Sobic007G179750 Sobic001G093600--Sobic007G179750 Sobic003G284300 Sobic003G284300 Sobic001G093600--Sobic003G284300 Sobic001G093600--Sobic007G191900 Sobic001G321600 Sobic001G321600 Sobic001G093600--Sobic001G321600 Sobic002G155900--Sobic001G179100 Sobic002G155900--Sobic003G255100 Sobic003G214000 Sobic003G214000 Sobic002G155900--Sobic003G214000 Sobic006G152500 Sobic006G152500 Sobic002G155900--Sobic006G152500 Sobic002G155900--Sobic010G079700 Sobic009G085900 Sobic009G085900 Sobic002G155900--Sobic009G085900 Sobic001G410450 Sobic001G410450 Sobic002G155900--Sobic001G410450 Sobic004G217700 Sobic004G217700 Sobic002G155900--Sobic004G217700 Sobic002G155900--Sobic002G287000 Sobic001G005500--Sobic001G321600 Sobic002G195700 Sobic002G195700 Sobic001G005500--Sobic002G195700 Sobic001G019300 Sobic001G019300 Sobic001G005500--Sobic001G019300 Sobic001G005500--Sobic001G093600 Sobic002G366100 Sobic002G366100 Sobic001G005500--Sobic002G366100 Sobic008G073400 Sobic008G073400 Sobic001G005500--Sobic008G073400 Sobic001G005500--Sobic006G269400 Sobic001G005500--Sobic006G273000 Sobic001G005500--Sobic007G191900 Sobic004G068700 Sobic004G068700 Sobic001G179100--Sobic004G068700 Sobic001G179100--Sobic003G214000 Sobic001G179100--Sobic002G155900 Sobic001G179100--Sobic002G287000 Sobic009G238100 Sobic009G238100 Sobic001G179100--Sobic009G238100 Sobic001G179100--Sobic003G255100 Sobic001G161300 Sobic001G161300 Sobic001G179100--Sobic001G161300 Sobic008G111300 Sobic008G111300 Sobic001G179100--Sobic008G111300 Sobic001G179100--Sobic002G366100 Sobic001G030500--Sobic003G255100 Sobic007G014600 Sobic007G014600 Sobic001G030500--Sobic007G014600 Sobic001G030500--Sobic010G079700 Sobic001G030500--Sobic001G179100 Sobic001G030500--Sobic007G191900 Sobic001G030500--Sobic001G005500 Sobic001G030500--Sobic006G269400 Sobic001G121100 Sobic001G121100 Sobic001G030500--Sobic001G121100 Sobic001G030500--Sobic002G271600 Sobic006G269400--Sobic002G195700 Sobic006G269400--Sobic001G005500 Sobic006G269400--Sobic003G255100 Sobic006G269400--Sobic001G275200 Sobic006G269400--Sobic007G191900 Sobic006G269400--Sobic010G079700 Sobic006G269400--Sobic006G273000 Sobic006G269400--Sobic002G366100 Sobic006G269400--Sobic008G073400 Sobic002G287000--Sobic004G068700 Sobic002G287000--Sobic001G179100 Sobic002G287000--Sobic003G255100 Sobic002G287000--Sobic002G366100 Sobic002G287000--Sobic001G321600 Sobic002G287000--Sobic003G214000 Sobic002G287000--Sobic001G005500 Sobic002G287000--Sobic009G238100 Sobic002G287000--Sobic002G195700 Sobic007G191900--Sobic001G005500 Sobic007G191900--Sobic001G321600 Sobic007G191900--Sobic001G093600 Sobic007G191900--Sobic003G255100 Sobic001G525900 Sobic001G525900 Sobic007G191900--Sobic001G525900 Sobic007G191900--Sobic002G195700 Sobic007G191900--Sobic006G269400 Sobic002G281000 Sobic002G281000 Sobic007G191900--Sobic002G281000 Sobic007G191900--Sobic006G273000
Octagon: transcription factors


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