Gene annotation
Transcriptome id Sobic.003G065600.2
Synonym Sb03g005590
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
gibberellin receptor GID1L2, putative, expressed
UniProt A0A1W0VVW8
Pfam PF12695
Panther DB PTHR23024:SF204 PTHR23024
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06570 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os01g06060.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a023385 , Zm00025a023390
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.003G065600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.009G038200 expressed protein -
3 Sobic.010G079700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
4 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
5 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
6 Sobic.002G155900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.010G157500 zinc finger protein, putative, expressed -
8 Sobic.006G053700 ACT domain containing protein, expressed -
9 Sobic.002G209100 glutamate receptor, putative, expressed -
10 Sobic.005G093400 expressed protein -
11 Sobic.007G127000 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
12 Sobic.009G233900 dehydrogenase, putative, expressed -
13 Sobic.009G085900 aquaporin protein, putative, expressed K09873: aquaporin TIP
14 Sobic.001G321600 dehydration response related protein, putative, expressed -
15 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
16 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
17 Sobic.002G041800 gibberellin receptor GID1L2, putative, expressed -
18 Sobic.001G452700 serine/threonine-protein kinase receptor precursor, putative, expressed -
19 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
20 Sobic.001G449800 OsWAK25 - OsWAK receptor-like protein kinase, expressed -


Gene co-expression network
sample Sobic003G065600 Sobic003G065600 Sobic003G255100 Sobic003G255100 Sobic003G065600--Sobic003G255100 Sobic009G038200 Sobic009G038200 Sobic003G065600--Sobic009G038200 Sobic010G079700 Sobic010G079700 Sobic003G065600--Sobic010G079700 Sobic002G271600 Sobic002G271600 Sobic003G065600--Sobic002G271600 Sobic002G287000 Sobic002G287000 Sobic003G065600--Sobic002G287000 Sobic002G155900 Sobic002G155900 Sobic003G065600--Sobic002G155900 Sobic010G157500 Sobic010G157500 Sobic003G065600--Sobic010G157500 Sobic006G053700 Sobic006G053700 Sobic003G065600--Sobic006G053700 Sobic002G209100 Sobic002G209100 Sobic003G065600--Sobic002G209100 Sobic003G255100--Sobic010G079700 Sobic001G093600 Sobic001G093600 Sobic003G255100--Sobic001G093600 Sobic003G255100--Sobic002G155900 Sobic001G005500 Sobic001G005500 Sobic003G255100--Sobic001G005500 Sobic001G179100 Sobic001G179100 Sobic003G255100--Sobic001G179100 Sobic001G030500 Sobic001G030500 Sobic003G255100--Sobic001G030500 Sobic006G269400 Sobic006G269400 Sobic003G255100--Sobic006G269400 Sobic003G255100--Sobic002G287000 Sobic007G191900 Sobic007G191900 Sobic003G255100--Sobic007G191900 Sobic003G284300 Sobic003G284300 Sobic009G038200--Sobic003G284300 Sobic005G063900 Sobic005G063900 Sobic009G038200--Sobic005G063900 Sobic001G321600 Sobic001G321600 Sobic009G038200--Sobic001G321600 Sobic001G019300 Sobic001G019300 Sobic009G038200--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic009G038200--Sobic005G190900 Sobic001G449800 Sobic001G449800 Sobic009G038200--Sobic001G449800 Sobic009G038200--Sobic002G209100 Sobic009G153200 Sobic009G153200 Sobic009G038200--Sobic009G153200 Sobic002G041800 Sobic002G041800 Sobic009G038200--Sobic002G041800 Sobic010G079700--Sobic003G255100 Sobic010G079700--Sobic001G030500 Sobic010G079700--Sobic006G269400 Sobic010G079700--Sobic002G155900 Sobic010G079700--Sobic001G093600 Sobic010G079700--Sobic002G287000 Sobic010G079700--Sobic001G179100 Sobic010G079700--Sobic001G005500 Sobic010G079700--Sobic002G271600 Sobic007G014600 Sobic007G014600 Sobic002G271600--Sobic007G014600 Sobic002G271600--Sobic002G209100 Sobic002G271600--Sobic002G041800 Sobic004G217700 Sobic004G217700 Sobic002G271600--Sobic004G217700 Sobic001G145050 Sobic001G145050 Sobic002G271600--Sobic001G145050 Sobic009G205600 Sobic009G205600 Sobic002G271600--Sobic009G205600 Sobic002G271600--Sobic006G053700 Sobic004G195800 Sobic004G195800 Sobic002G271600--Sobic004G195800 Sobic002G366100 Sobic002G366100 Sobic002G271600--Sobic002G366100 Sobic004G068700 Sobic004G068700 Sobic002G287000--Sobic004G068700 Sobic002G287000--Sobic001G179100 Sobic002G287000--Sobic003G255100 Sobic002G287000--Sobic002G366100 Sobic002G287000--Sobic001G321600 Sobic003G214000 Sobic003G214000 Sobic002G287000--Sobic003G214000 Sobic002G287000--Sobic001G005500 Sobic009G238100 Sobic009G238100 Sobic002G287000--Sobic009G238100 Sobic002G195700 Sobic002G195700 Sobic002G287000--Sobic002G195700 Sobic002G155900--Sobic001G179100 Sobic002G155900--Sobic003G255100 Sobic002G155900--Sobic003G214000 Sobic006G152500 Sobic006G152500 Sobic002G155900--Sobic006G152500 Sobic002G155900--Sobic010G079700 Sobic009G085900 Sobic009G085900 Sobic002G155900--Sobic009G085900 Sobic001G410450 Sobic001G410450 Sobic002G155900--Sobic001G410450 Sobic002G155900--Sobic004G217700 Sobic002G155900--Sobic002G287000 Sobic003G296300 Sobic003G296300 Sobic010G157500--Sobic003G296300 Sobic010G157500--Sobic009G038200 Sobic006G167800 Sobic006G167800 Sobic010G157500--Sobic006G167800 Sobic003G013600 Sobic003G013600 Sobic010G157500--Sobic003G013600 Sobic010G157500--Sobic003G065600 Sobic010G157500--Sobic002G209100 Sobic008G018600 Sobic008G018600 Sobic010G157500--Sobic008G018600 Sobic010G157500--Sobic004G195800 Sobic001G093900 Sobic001G093900 Sobic010G157500--Sobic001G093900 Sobic004G096300 Sobic004G096300 Sobic006G053700--Sobic004G096300 Sobic010G172200 Sobic010G172200 Sobic006G053700--Sobic010G172200 Sobic006G053700--Sobic007G014600 Sobic009G213400 Sobic009G213400 Sobic006G053700--Sobic009G213400 Sobic003G264901 Sobic003G264901 Sobic006G053700--Sobic003G264901 Sobic006G053700--Sobic002G209100 Sobic006G053700--Sobic002G271600 Sobic006G053700--Sobic001G005500 Sobic006G053700--Sobic007G191900 Sobic002G209100--Sobic004G195800 Sobic002G209100--Sobic002G041800 Sobic005G085500 Sobic005G085500 Sobic002G209100--Sobic005G085500 Sobic010G120800 Sobic010G120800 Sobic002G209100--Sobic010G120800 Sobic009G252100 Sobic009G252100 Sobic002G209100--Sobic009G252100 Sobic002G209100--Sobic004G217700 Sobic002G209100--Sobic002G271600 Sobic004G209500 Sobic004G209500 Sobic002G209100--Sobic004G209500 Sobic002G257100 Sobic002G257100 Sobic002G209100--Sobic002G257100
Octagon: transcription factors


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