Gene annotation
Transcriptome id Sobic.009G085900.1
Synonym Sb09g007940, 1, TIP4
Functional annotation aquaporin protein, putative, expressed
UniProt C5YV67
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF143
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09873; aquaporin TIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G25810 : tonoplast intrinsic protein 4;1
RAP-DB (Rice) LOC_Os05g14240.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a043211 , Zm00025a023303 , Zm00025a037562
Brachypodium KQK03432 , KQK06970
Barley HORVU3Hr1G031680.4 , HORVU6Hr1G062980.1 , HORVU6Hr1G062980.2 , HORVU4Hr1G085250.4 , HORVU4Hr1G085250.5 , HORVU4Hr1G085250.6 , HORVU4Hr1G085250.7 , HORVU4Hr1G085250.1 , HORVU4Hr1G085250.2 , HORVU0Hr1G032130.2 , HORVU0Hr1G032130.1 , HORVU3Hr1G031680.9 , HORVU3Hr1G031680.8 , HORVU3Hr1G031680.3 , HORVU3Hr1G031680.2 , HORVU3Hr1G031680.1 , HORVU3Hr1G031680.7
Wheat TraesCS4D02G344300 , TraesCS6D02G232100 , TraesCS5A02G518300 , TraesCS4B02G349500 , TraesCS6A02G250300 , TraesCS3B02G182400 , TraesCS3A02G155800
Populus -


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cDNA sequences
Sobic.009G085900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G155900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
3 Sobic.002G271600 ras-related protein, putative, expressed K07904: Ras-related protein Rab-11A
4 Sobic.010G079700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
5 Sobic.002G287000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Up-reguralion under combine stress of drought and heat(PubMedID : 24916767)@flavin-containing monooxygenase family protein, putative, expressed K00485: dimethylaniline monooxygenase (N-oxide forming)
6 Sobic.001G426400 expressed protein -
7 Sobic.006G053700 ACT domain containing protein, expressed -
8 Sobic.003G065600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
9 Sobic.008G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein DSP1, putative, expressed -
10 Sobic.003G214000 Highly abundant under cold stress(PubMedID : 26645959)@heat shock protein DnaJ, putative, expressed -
11 Sobic.003G151800 expressed protein -
12 Sobic.001G030500 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@cytokinin-N-glucosyltransferase 1, putative, expressed -
13 Sobic.006G195100 purine permease, putative, expressed -
14 Sobic.001G179100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@chloroplast post-illumination chlorophyll fluorescence increase protein, putative, expressed -
15 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
16 Sobic.007G014600 transferase family protein, putative, expressed -
17 Sobic.002G366100 NAD dependent epimerase/dehydratase family protein, putative, expressed -
18 Sobic.004G068800 cytochrome P450 71D10, putative, expressed -
19 Sobic.005G133166 - -
20 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -


Gene co-expression network
sample Sobic009G085900 Sobic009G085900 Sobic002G155900 Sobic002G155900 Sobic009G085900--Sobic002G155900 Sobic003G255100 Sobic003G255100 Sobic009G085900--Sobic003G255100 Sobic002G271600 Sobic002G271600 Sobic009G085900--Sobic002G271600 Sobic010G079700 Sobic010G079700 Sobic009G085900--Sobic010G079700 Sobic002G287000 Sobic002G287000 Sobic009G085900--Sobic002G287000 Sobic001G426400 Sobic001G426400 Sobic009G085900--Sobic001G426400 Sobic006G053700 Sobic006G053700 Sobic009G085900--Sobic006G053700 Sobic003G065600 Sobic003G065600 Sobic009G085900--Sobic003G065600 Sobic008G148400 Sobic008G148400 Sobic009G085900--Sobic008G148400 Sobic001G179100 Sobic001G179100 Sobic002G155900--Sobic001G179100 Sobic002G155900--Sobic003G255100 Sobic003G214000 Sobic003G214000 Sobic002G155900--Sobic003G214000 Sobic006G152500 Sobic006G152500 Sobic002G155900--Sobic006G152500 Sobic002G155900--Sobic010G079700 Sobic002G155900--Sobic009G085900 Sobic001G410450 Sobic001G410450 Sobic002G155900--Sobic001G410450 Sobic004G217700 Sobic004G217700 Sobic002G155900--Sobic004G217700 Sobic002G155900--Sobic002G287000 Sobic003G255100--Sobic010G079700 Sobic001G093600 Sobic001G093600 Sobic003G255100--Sobic001G093600 Sobic003G255100--Sobic002G155900 Sobic001G005500 Sobic001G005500 Sobic003G255100--Sobic001G005500 Sobic003G255100--Sobic001G179100 Sobic001G030500 Sobic001G030500 Sobic003G255100--Sobic001G030500 Sobic006G269400 Sobic006G269400 Sobic003G255100--Sobic006G269400 Sobic003G255100--Sobic002G287000 Sobic007G191900 Sobic007G191900 Sobic003G255100--Sobic007G191900 Sobic007G014600 Sobic007G014600 Sobic002G271600--Sobic007G014600 Sobic002G209100 Sobic002G209100 Sobic002G271600--Sobic002G209100 Sobic002G041800 Sobic002G041800 Sobic002G271600--Sobic002G041800 Sobic002G271600--Sobic004G217700 Sobic001G145050 Sobic001G145050 Sobic002G271600--Sobic001G145050 Sobic009G205600 Sobic009G205600 Sobic002G271600--Sobic009G205600 Sobic002G271600--Sobic006G053700 Sobic004G195800 Sobic004G195800 Sobic002G271600--Sobic004G195800 Sobic002G366100 Sobic002G366100 Sobic002G271600--Sobic002G366100 Sobic010G079700--Sobic003G255100 Sobic010G079700--Sobic001G030500 Sobic010G079700--Sobic006G269400 Sobic010G079700--Sobic002G155900 Sobic010G079700--Sobic001G093600 Sobic010G079700--Sobic002G287000 Sobic010G079700--Sobic001G179100 Sobic010G079700--Sobic001G005500 Sobic010G079700--Sobic002G271600 Sobic004G068700 Sobic004G068700 Sobic002G287000--Sobic004G068700 Sobic002G287000--Sobic001G179100 Sobic002G287000--Sobic003G255100 Sobic002G287000--Sobic002G366100 Sobic001G321600 Sobic001G321600 Sobic002G287000--Sobic001G321600 Sobic002G287000--Sobic003G214000 Sobic002G287000--Sobic001G005500 Sobic009G238100 Sobic009G238100 Sobic002G287000--Sobic009G238100 Sobic002G195700 Sobic002G195700 Sobic002G287000--Sobic002G195700 Sobic006G265400 Sobic006G265400 Sobic001G426400--Sobic006G265400 Sobic001G426400--Sobic008G148400 Sobic001G426400--Sobic009G238100 Sobic009G032100 Sobic009G032100 Sobic001G426400--Sobic009G032100 Sobic004G249500 Sobic004G249500 Sobic001G426400--Sobic004G249500 Sobic001G426400--Sobic003G255100 Sobic003G030400 Sobic003G030400 Sobic001G426400--Sobic003G030400 Sobic007G060900 Sobic007G060900 Sobic001G426400--Sobic007G060900 Sobic007G131200 Sobic007G131200 Sobic001G426400--Sobic007G131200 Sobic004G096300 Sobic004G096300 Sobic006G053700--Sobic004G096300 Sobic010G172200 Sobic010G172200 Sobic006G053700--Sobic010G172200 Sobic006G053700--Sobic007G014600 Sobic009G213400 Sobic009G213400 Sobic006G053700--Sobic009G213400 Sobic003G264901 Sobic003G264901 Sobic006G053700--Sobic003G264901 Sobic006G053700--Sobic002G209100 Sobic006G053700--Sobic002G271600 Sobic006G053700--Sobic001G005500 Sobic006G053700--Sobic007G191900 Sobic003G065600--Sobic003G255100 Sobic009G038200 Sobic009G038200 Sobic003G065600--Sobic009G038200 Sobic003G065600--Sobic010G079700 Sobic003G065600--Sobic002G271600 Sobic003G065600--Sobic002G287000 Sobic003G065600--Sobic002G155900 Sobic010G157500 Sobic010G157500 Sobic003G065600--Sobic010G157500 Sobic003G065600--Sobic006G053700 Sobic003G065600--Sobic002G209100 Sobic008G148400--Sobic009G238100 Sobic008G148400--Sobic001G426400 Sobic008G148400--Sobic003G030400 Sobic003G222600 Sobic003G222600 Sobic008G148400--Sobic003G222600 Sobic001G423100 Sobic001G423100 Sobic008G148400--Sobic001G423100 Sobic009G154600 Sobic009G154600 Sobic008G148400--Sobic009G154600 Sobic008G148400--Sobic007G131200 Sobic009G233800 Sobic009G233800 Sobic008G148400--Sobic009G233800 Sobic008G148400--Sobic006G265400
Octagon: transcription factors


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