Gene annotation
Transcriptome id Sobic.009G154600.2,Sobic.009G154600.1
Synonym Sb09g021800
Functional annotation glycosyl hydrolases family 17, putative, expressed
UniProt C5YYS5
Pfam PF00332
Panther DB PTHR32227 PTHR32227:SF70
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT2G27500 : Glycosyl hydrolase superfamily protein
RAP-DB (Rice) LOC_Os01g64170.2 : glycosyl hydrolases family 17, putative, expressed
MaizeGDB (Corn) Zm00025a037249 , Zm00025a011515 , Zm00025a050933 , Zm00025a026758 , Zm00025a039585
Brachypodium PNT71166 , KQK10714 , KQJ99728
Barley HORVU2Hr1G072890.8 , HORVU2Hr1G072890.9 , HORVU2Hr1G072890.2 , HORVU2Hr1G072890.3 , HORVU2Hr1G072890.1 , HORVU2Hr1G072890.6 , HORVU2Hr1G072890.7 , HORVU2Hr1G072890.4 , HORVU2Hr1G072890.5 , HORVU1Hr1G073820.3 , HORVU1Hr1G073820.2 , HORVU1Hr1G073820.7 , HORVU1Hr1G073820.6 , HORVU1Hr1G073820.5 , HORVU1Hr1G073820.4 , HORVU1Hr1G073820.8 , HORVU7Hr1G079650.1 , HORVU7Hr1G079650.2 , HORVU7Hr1G079650.3 , HORVU7Hr1G079650.4 , HORVU7Hr1G079650.6 , HORVU7Hr1G079650.7 , HORVU7Hr1G079650.8 , HORVU7Hr1G079650.9 , HORVU2Hr1G072890.10 , HORVU2Hr1G072890.11 , HORVU7Hr1G079650.12 , HORVU7Hr1G079650.13 , HORVU7Hr1G079650.11 , HORVU7Hr1G079650.14 , HORVU7Hr1G079650.10 , HORVU3Hr1G084170.1 , HORVU3Hr1G084170.3 , HORVU3Hr1G084170.2 , HORVU3Hr1G084170.5 , HORVU3Hr1G084170.4
Wheat TraesCS7D02G329400 , TraesCS1B02G285400 , TraesCS1B02G285400 , TraesCS7A02G349200 , TraesCS1A02G276200 , TraesCS7B02G233500 , TraesCS2B02G311200 , TraesCS2B02G311200 , TraesCS2A02G294700 , TraesCS2A02G294700 , TraesCS3D02G366700 , TraesCS3D02G366700 , TraesCS3A02G374000 , TraesCS3A02G374000 , TraesCS2D02G292500 , TraesCS2D02G292500 , TraesCS1D02G275700 , TraesCS3B02G406200 , TraesCS3B02G406200
Populus -


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cDNA sequences
Sobic.009G154600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
2 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
3 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
4 Sobic.008G148400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA-binding protein DSP1, putative, expressed -
5 Sobic.010G258300 integral membrane protein, putative, expressed -
6 Sobic.003G406700 expressed protein -
7 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
8 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
9 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
10 Sobic.001G377000 auxin-repressed protein, putative, expressed -
11 Sobic.004G011566 - K03781: katE, CAT, catB, catalase
12 Sobic.009G238100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@ubiquitin carboxyl-terminal hydrolase, family 1, putative, expressed -
13 Sobic.003G222600 similar to DEAD-box ATP-dependent RNA helicase 25(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@- -
14 Sobic.007G110200 wound responsive protein, putative, expressed -
15 Sobic.003G026700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
16 Sobic.007G120401 - -
17 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G093600 - -
19 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G426400 expressed protein -


Gene co-expression network
sample Sobic009G154600 Sobic009G154600 Sobic001G191200 Sobic001G191200 Sobic009G154600--Sobic001G191200 Sobic003G107300 Sobic003G107300 Sobic009G154600--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic009G154600--Sobic001G423100 Sobic008G148400 Sobic008G148400 Sobic009G154600--Sobic008G148400 Sobic010G258300 Sobic010G258300 Sobic009G154600--Sobic010G258300 Sobic003G406700 Sobic003G406700 Sobic009G154600--Sobic003G406700 Sobic003G222300 Sobic003G222300 Sobic009G154600--Sobic003G222300 Sobic001G031300 Sobic001G031300 Sobic009G154600--Sobic001G031300 Sobic009G213400 Sobic009G213400 Sobic009G154600--Sobic009G213400 Sobic001G191200--Sobic003G406700 Sobic001G078200 Sobic001G078200 Sobic001G191200--Sobic001G078200 Sobic001G191200--Sobic009G154600 Sobic001G377000 Sobic001G377000 Sobic001G191200--Sobic001G377000 Sobic001G191200--Sobic009G213400 Sobic005G085200 Sobic005G085200 Sobic001G191200--Sobic005G085200 Sobic001G191200--Sobic003G107300 Sobic001G191200--Sobic001G423100 Sobic001G225500 Sobic001G225500 Sobic001G191200--Sobic001G225500 Sobic001G093600 Sobic001G093600 Sobic003G107300--Sobic001G093600 Sobic003G107300--Sobic009G154600 Sobic003G107300--Sobic001G191200 Sobic003G107300--Sobic003G406700 Sobic003G026700 Sobic003G026700 Sobic003G107300--Sobic003G026700 Sobic003G255100 Sobic003G255100 Sobic003G107300--Sobic003G255100 Sobic001G005500 Sobic001G005500 Sobic003G107300--Sobic001G005500 Sobic003G107300--Sobic009G213400 Sobic003G107300--Sobic003G222300 Sobic001G423100--Sobic009G154600 Sobic001G423100--Sobic008G148400 Sobic001G423100--Sobic001G191200 Sobic001G423100--Sobic003G406700 Sobic001G423100--Sobic001G078200 Sobic001G423100--Sobic001G031300 Sobic006G279800 Sobic006G279800 Sobic001G423100--Sobic006G279800 Sobic001G423100--Sobic010G258300 Sobic003G030400 Sobic003G030400 Sobic001G423100--Sobic003G030400 Sobic009G238100 Sobic009G238100 Sobic008G148400--Sobic009G238100 Sobic001G426400 Sobic001G426400 Sobic008G148400--Sobic001G426400 Sobic008G148400--Sobic003G030400 Sobic003G222600 Sobic003G222600 Sobic008G148400--Sobic003G222600 Sobic008G148400--Sobic001G423100 Sobic008G148400--Sobic009G154600 Sobic007G131200 Sobic007G131200 Sobic008G148400--Sobic007G131200 Sobic009G233800 Sobic009G233800 Sobic008G148400--Sobic009G233800 Sobic006G265400 Sobic006G265400 Sobic008G148400--Sobic006G265400 Sobic010G258300--Sobic003G222300 Sobic007G110200 Sobic007G110200 Sobic010G258300--Sobic007G110200 Sobic010G258300--Sobic001G031300 Sobic010G258300--Sobic003G222600 Sobic007G205600 Sobic007G205600 Sobic010G258300--Sobic007G205600 Sobic010G258300--Sobic009G154600 Sobic003G170200 Sobic003G170200 Sobic010G258300--Sobic003G170200 Sobic004G011566 Sobic004G011566 Sobic010G258300--Sobic004G011566 Sobic010G258300--Sobic003G030400 Sobic003G406700--Sobic001G191200 Sobic003G406700--Sobic001G377000 Sobic003G406700--Sobic009G154600 Sobic003G406700--Sobic003G107300 Sobic003G406700--Sobic001G423100 Sobic003G406700--Sobic001G225500 Sobic003G406700--Sobic006G279800 Sobic003G406700--Sobic001G031300 Sobic002G331000 Sobic002G331000 Sobic003G406700--Sobic002G331000 Sobic003G222300--Sobic010G258300 Sobic010G245100 Sobic010G245100 Sobic003G222300--Sobic010G245100 Sobic010G052500 Sobic010G052500 Sobic003G222300--Sobic010G052500 Sobic003G222300--Sobic009G213400 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic003G222300--Sobic009G154600 Sobic003G222300--Sobic001G031300 Sobic003G222300--Sobic003G107300 Sobic001G031300--Sobic010G258300 Sobic007G076700 Sobic007G076700 Sobic001G031300--Sobic007G076700 Sobic001G031300--Sobic007G205600 Sobic004G035000 Sobic004G035000 Sobic001G031300--Sobic004G035000 Sobic001G031300--Sobic009G154600 Sobic001G031300--Sobic003G222300 Sobic001G031300--Sobic001G377000 Sobic001G031300--Sobic001G191200 Sobic001G031300--Sobic007G110200 Sobic009G213400--Sobic010G245100 Sobic009G213400--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic009G213400--Sobic004G096300 Sobic006G273000 Sobic006G273000 Sobic009G213400--Sobic006G273000 Sobic009G213400--Sobic003G222300 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic009G213400--Sobic001G093600 Sobic009G213400--Sobic010G052500
Octagon: transcription factors


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