Gene annotation
Transcriptome id Sobic.003G107300.1
Synonym CCL, Sb03g009010
Functional annotation light-induced protein 1-like, putative, expressed
UniProt C5XF30
Pfam PF07207
Panther DB PTHR36762 PTHR36762:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G26740 : CCR-like
RAP-DB (Rice) LOC_Os01g01340.1 : light-induced protein 1-like, putative, expressed
MaizeGDB (Corn) Zm00025a023852 , Zm00025a035394
Brachypodium -
Barley -
Wheat TraesCS3A02G081300
Populus -


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cDNA sequences
Sobic.003G107300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G093600 - -
2 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
3 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
4 Sobic.003G406700 expressed protein -
5 Sobic.003G026700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
6 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
8 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
9 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
10 Sobic.007G179750 - -
11 Sobic.006G273000 AT hook motif domain containing protein, expressed -
12 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
13 Sobic.008G101500 powdery mildew resistance protein PM3b, putative, expressed -
14 Sobic.010G079700 1-aminocyclopropane-1-carboxylate oxidase homolog 4, putative, expressed -
15 Sobic.007G191900 ACT domain containing protein, expressed -
16 Sobic.010G244500 expressed protein -
17 Sobic.003G284300 expressed protein -
18 Sobic.010G258300 integral membrane protein, putative, expressed -
19 Sobic.003G089600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
20 Sobic.007G205600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00434: L-ascorbate peroxidase


Gene co-expression network
sample Sobic003G107300 Sobic003G107300 Sobic001G093600 Sobic001G093600 Sobic003G107300--Sobic001G093600 Sobic009G154600 Sobic009G154600 Sobic003G107300--Sobic009G154600 Sobic001G191200 Sobic001G191200 Sobic003G107300--Sobic001G191200 Sobic003G406700 Sobic003G406700 Sobic003G107300--Sobic003G406700 Sobic003G026700 Sobic003G026700 Sobic003G107300--Sobic003G026700 Sobic003G255100 Sobic003G255100 Sobic003G107300--Sobic003G255100 Sobic001G005500 Sobic001G005500 Sobic003G107300--Sobic001G005500 Sobic009G213400 Sobic009G213400 Sobic003G107300--Sobic009G213400 Sobic003G222300 Sobic003G222300 Sobic003G107300--Sobic003G222300 Sobic001G093600--Sobic003G107300 Sobic006G273000 Sobic006G273000 Sobic001G093600--Sobic006G273000 Sobic001G093600--Sobic001G005500 Sobic001G275200 Sobic001G275200 Sobic001G093600--Sobic001G275200 Sobic001G093600--Sobic003G255100 Sobic007G179750 Sobic007G179750 Sobic001G093600--Sobic007G179750 Sobic003G284300 Sobic003G284300 Sobic001G093600--Sobic003G284300 Sobic007G191900 Sobic007G191900 Sobic001G093600--Sobic007G191900 Sobic001G321600 Sobic001G321600 Sobic001G093600--Sobic001G321600 Sobic009G154600--Sobic001G191200 Sobic009G154600--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic009G154600--Sobic001G423100 Sobic008G148400 Sobic008G148400 Sobic009G154600--Sobic008G148400 Sobic010G258300 Sobic010G258300 Sobic009G154600--Sobic010G258300 Sobic009G154600--Sobic003G406700 Sobic009G154600--Sobic003G222300 Sobic001G031300 Sobic001G031300 Sobic009G154600--Sobic001G031300 Sobic009G154600--Sobic009G213400 Sobic001G191200--Sobic003G406700 Sobic001G078200 Sobic001G078200 Sobic001G191200--Sobic001G078200 Sobic001G191200--Sobic009G154600 Sobic001G377000 Sobic001G377000 Sobic001G191200--Sobic001G377000 Sobic001G191200--Sobic009G213400 Sobic005G085200 Sobic005G085200 Sobic001G191200--Sobic005G085200 Sobic001G191200--Sobic003G107300 Sobic001G191200--Sobic001G423100 Sobic001G225500 Sobic001G225500 Sobic001G191200--Sobic001G225500 Sobic003G406700--Sobic001G191200 Sobic003G406700--Sobic001G377000 Sobic003G406700--Sobic009G154600 Sobic003G406700--Sobic003G107300 Sobic003G406700--Sobic001G423100 Sobic003G406700--Sobic001G225500 Sobic006G279800 Sobic006G279800 Sobic003G406700--Sobic006G279800 Sobic003G406700--Sobic001G031300 Sobic002G331000 Sobic002G331000 Sobic003G406700--Sobic002G331000 Sobic003G026700--Sobic003G107300 Sobic003G026700--Sobic001G093600 Sobic003G026700--Sobic001G423100 Sobic008G177850 Sobic008G177850 Sobic003G026700--Sobic008G177850 Sobic003G026700--Sobic009G154600 Sobic003G026700--Sobic007G191900 Sobic009G253000 Sobic009G253000 Sobic003G026700--Sobic009G253000 Sobic003G026700--Sobic003G255100 Sobic003G026700--Sobic003G406700 Sobic010G079700 Sobic010G079700 Sobic003G255100--Sobic010G079700 Sobic003G255100--Sobic001G093600 Sobic002G155900 Sobic002G155900 Sobic003G255100--Sobic002G155900 Sobic003G255100--Sobic001G005500 Sobic001G179100 Sobic001G179100 Sobic003G255100--Sobic001G179100 Sobic001G030500 Sobic001G030500 Sobic003G255100--Sobic001G030500 Sobic006G269400 Sobic006G269400 Sobic003G255100--Sobic006G269400 Sobic002G287000 Sobic002G287000 Sobic003G255100--Sobic002G287000 Sobic003G255100--Sobic007G191900 Sobic001G005500--Sobic001G321600 Sobic002G195700 Sobic002G195700 Sobic001G005500--Sobic002G195700 Sobic001G019300 Sobic001G019300 Sobic001G005500--Sobic001G019300 Sobic001G005500--Sobic001G093600 Sobic002G366100 Sobic002G366100 Sobic001G005500--Sobic002G366100 Sobic008G073400 Sobic008G073400 Sobic001G005500--Sobic008G073400 Sobic001G005500--Sobic006G269400 Sobic001G005500--Sobic006G273000 Sobic001G005500--Sobic007G191900 Sobic010G245100 Sobic010G245100 Sobic009G213400--Sobic010G245100 Sobic009G213400--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic009G213400--Sobic004G096300 Sobic009G213400--Sobic006G273000 Sobic009G213400--Sobic003G222300 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic009G213400--Sobic001G093600 Sobic010G052500 Sobic010G052500 Sobic009G213400--Sobic010G052500 Sobic003G222300--Sobic010G258300 Sobic003G222300--Sobic010G245100 Sobic003G222300--Sobic010G052500 Sobic003G222300--Sobic009G213400 Sobic003G222300--Sobic001G093600 Sobic003G222300--Sobic008G177850 Sobic003G222300--Sobic009G154600 Sobic003G222300--Sobic001G031300 Sobic003G222300--Sobic003G107300
Octagon: transcription factors


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