Gene annotation
Transcriptome id Sobic.003G406700.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6Q7X6
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os01g69840.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
2 Sobic.001G377000 auxin-repressed protein, putative, expressed -
3 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
4 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
5 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
6 Sobic.001G225500 expressed protein -
7 Sobic.006G279800 expressed protein -
8 Sobic.001G031300 PPR repeat domain containing protein, putative, expressed -
9 Sobic.002G331000 OsFBX462 - F-box domain containing protein, expressed -
10 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
11 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
12 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
13 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.008G101500 powdery mildew resistance protein PM3b, putative, expressed -
15 Sobic.004G345900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CBS domain containing membrane protein, putative, expressed -
16 Sobic.001G093600 - -
17 Sobic.003G255100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.007G131200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.007G179750 - -
20 Sobic.003G026700 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic003G406700 Sobic003G406700 Sobic001G191200 Sobic001G191200 Sobic003G406700--Sobic001G191200 Sobic001G377000 Sobic001G377000 Sobic003G406700--Sobic001G377000 Sobic009G154600 Sobic009G154600 Sobic003G406700--Sobic009G154600 Sobic003G107300 Sobic003G107300 Sobic003G406700--Sobic003G107300 Sobic001G423100 Sobic001G423100 Sobic003G406700--Sobic001G423100 Sobic001G225500 Sobic001G225500 Sobic003G406700--Sobic001G225500 Sobic006G279800 Sobic006G279800 Sobic003G406700--Sobic006G279800 Sobic001G031300 Sobic001G031300 Sobic003G406700--Sobic001G031300 Sobic002G331000 Sobic002G331000 Sobic003G406700--Sobic002G331000 Sobic001G191200--Sobic003G406700 Sobic001G078200 Sobic001G078200 Sobic001G191200--Sobic001G078200 Sobic001G191200--Sobic009G154600 Sobic001G191200--Sobic001G377000 Sobic009G213400 Sobic009G213400 Sobic001G191200--Sobic009G213400 Sobic005G085200 Sobic005G085200 Sobic001G191200--Sobic005G085200 Sobic001G191200--Sobic003G107300 Sobic001G191200--Sobic001G423100 Sobic001G191200--Sobic001G225500 Sobic001G377000--Sobic001G191200 Sobic001G377000--Sobic009G213400 Sobic004G096300 Sobic004G096300 Sobic001G377000--Sobic004G096300 Sobic001G377000--Sobic003G406700 Sobic007G148200 Sobic007G148200 Sobic001G377000--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic001G377000--Sobic001G293800 Sobic007G071000 Sobic007G071000 Sobic001G377000--Sobic007G071000 Sobic010G172200 Sobic010G172200 Sobic001G377000--Sobic010G172200 Sobic003G264901 Sobic003G264901 Sobic001G377000--Sobic003G264901 Sobic009G154600--Sobic001G191200 Sobic009G154600--Sobic003G107300 Sobic009G154600--Sobic001G423100 Sobic008G148400 Sobic008G148400 Sobic009G154600--Sobic008G148400 Sobic010G258300 Sobic010G258300 Sobic009G154600--Sobic010G258300 Sobic009G154600--Sobic003G406700 Sobic003G222300 Sobic003G222300 Sobic009G154600--Sobic003G222300 Sobic009G154600--Sobic001G031300 Sobic009G154600--Sobic009G213400 Sobic001G093600 Sobic001G093600 Sobic003G107300--Sobic001G093600 Sobic003G107300--Sobic009G154600 Sobic003G107300--Sobic001G191200 Sobic003G107300--Sobic003G406700 Sobic003G026700 Sobic003G026700 Sobic003G107300--Sobic003G026700 Sobic003G255100 Sobic003G255100 Sobic003G107300--Sobic003G255100 Sobic001G005500 Sobic001G005500 Sobic003G107300--Sobic001G005500 Sobic003G107300--Sobic009G213400 Sobic003G107300--Sobic003G222300 Sobic001G423100--Sobic009G154600 Sobic001G423100--Sobic008G148400 Sobic001G423100--Sobic001G191200 Sobic001G423100--Sobic003G406700 Sobic001G423100--Sobic001G078200 Sobic001G423100--Sobic001G031300 Sobic001G423100--Sobic006G279800 Sobic001G423100--Sobic010G258300 Sobic003G030400 Sobic003G030400 Sobic001G423100--Sobic003G030400 Sobic001G225400 Sobic001G225400 Sobic001G225500--Sobic001G225400 Sobic001G225500--Sobic001G377000 Sobic001G225500--Sobic001G191200 Sobic001G225500--Sobic003G406700 Sobic001G225500--Sobic010G172200 Sobic010G246600 Sobic010G246600 Sobic001G225500--Sobic010G246600 Sobic001G225500--Sobic009G213400 Sobic007G179750 Sobic007G179750 Sobic001G225500--Sobic007G179750 Sobic003G320600 Sobic003G320600 Sobic001G225500--Sobic003G320600 Sobic006G279800--Sobic005G085200 Sobic006G279800--Sobic001G191200 Sobic006G279800--Sobic003G406700 Sobic006G279800--Sobic001G423100 Sobic009G197000 Sobic009G197000 Sobic006G279800--Sobic009G197000 Sobic005G085600 Sobic005G085600 Sobic006G279800--Sobic005G085600 Sobic010G057300 Sobic010G057300 Sobic006G279800--Sobic010G057300 Sobic006G279800--Sobic001G225500 Sobic006G279800--Sobic001G377000 Sobic001G031300--Sobic010G258300 Sobic007G076700 Sobic007G076700 Sobic001G031300--Sobic007G076700 Sobic007G205600 Sobic007G205600 Sobic001G031300--Sobic007G205600 Sobic004G035000 Sobic004G035000 Sobic001G031300--Sobic004G035000 Sobic001G031300--Sobic009G154600 Sobic001G031300--Sobic003G222300 Sobic001G031300--Sobic001G377000 Sobic001G031300--Sobic001G191200 Sobic007G110200 Sobic007G110200 Sobic001G031300--Sobic007G110200 Sobic004G345900 Sobic004G345900 Sobic002G331000--Sobic004G345900 Sobic002G213800 Sobic002G213800 Sobic002G331000--Sobic002G213800 Sobic002G331000--Sobic005G085200 Sobic010G057400 Sobic010G057400 Sobic002G331000--Sobic010G057400 Sobic002G331000--Sobic003G406700 Sobic002G331000--Sobic009G197000 Sobic004G199600 Sobic004G199600 Sobic002G331000--Sobic004G199600 Sobic009G078500 Sobic009G078500 Sobic002G331000--Sobic009G078500 Sobic010G270300 Sobic010G270300 Sobic002G331000--Sobic010G270300
Octagon: transcription factors


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