Gene annotation
Transcriptome id Sobic.006G279800.1
Synonym
Functional annotation expressed protein
UniProt A0A1Z5RGK0
Pfam -
Panther DB PTHR25952 PTHR25952:SF206
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os07g48590.1 : retrotransposon protein, putative, unclassified
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.006G279800


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G085200 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.001G191200 a marker of bud dormancy(PubMedID : 16443694)@auxin-repressed protein, putative, expressed -
3 Sobic.003G406700 expressed protein -
4 Sobic.001G423100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein K09562: HSPBP1, hsp70-interacting protein
5 Sobic.009G197000 O-methyltransferase family 2 protein (At)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
6 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
7 Sobic.010G057300 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@uncharacterized glycosyltransferase, putative, expressed K06617: raffinose synthase
8 Sobic.001G225500 expressed protein -
9 Sobic.001G377000 auxin-repressed protein, putative, expressed -
10 Sobic.001G141300 RNA recognition motif containing protein, expressed -
11 Sobic.001G078200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.001G225400 expressed protein -
13 Sobic.002G279100 "Syntelog of ZmMYB31, bind to the COMT1, CSE, and 4CL2 promroter region."(PubMedID : 30387379)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.007G189800 B-box (BBX) protein(PubMedID : 30626335)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CCT/B-box zinc finger protein, putative, expressed -
15 Sobic.009G154600 glycosyl hydrolases family 17, putative, expressed -
16 Sobic.001G277000 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.002G095900 - -
18 Sobic.006G158000 expressed protein -
19 Sobic.002G331000 OsFBX462 - F-box domain containing protein, expressed -
20 Sobic.009G159700 expressed protein -


Gene co-expression network
sample Sobic006G279800 Sobic006G279800 Sobic005G085200 Sobic005G085200 Sobic006G279800--Sobic005G085200 Sobic001G191200 Sobic001G191200 Sobic006G279800--Sobic001G191200 Sobic003G406700 Sobic003G406700 Sobic006G279800--Sobic003G406700 Sobic001G423100 Sobic001G423100 Sobic006G279800--Sobic001G423100 Sobic009G197000 Sobic009G197000 Sobic006G279800--Sobic009G197000 Sobic005G085600 Sobic005G085600 Sobic006G279800--Sobic005G085600 Sobic010G057300 Sobic010G057300 Sobic006G279800--Sobic010G057300 Sobic001G225500 Sobic001G225500 Sobic006G279800--Sobic001G225500 Sobic001G377000 Sobic001G377000 Sobic006G279800--Sobic001G377000 Sobic005G085200--Sobic010G057300 Sobic005G085200--Sobic005G085600 Sobic004G345900 Sobic004G345900 Sobic005G085200--Sobic004G345900 Sobic007G189800 Sobic007G189800 Sobic005G085200--Sobic007G189800 Sobic004G199600 Sobic004G199600 Sobic005G085200--Sobic004G199600 Sobic010G057400 Sobic010G057400 Sobic005G085200--Sobic010G057400 Sobic009G159700 Sobic009G159700 Sobic005G085200--Sobic009G159700 Sobic009G078500 Sobic009G078500 Sobic005G085200--Sobic009G078500 Sobic004G285800 Sobic004G285800 Sobic005G085200--Sobic004G285800 Sobic001G191200--Sobic003G406700 Sobic001G078200 Sobic001G078200 Sobic001G191200--Sobic001G078200 Sobic009G154600 Sobic009G154600 Sobic001G191200--Sobic009G154600 Sobic001G191200--Sobic001G377000 Sobic009G213400 Sobic009G213400 Sobic001G191200--Sobic009G213400 Sobic001G191200--Sobic005G085200 Sobic003G107300 Sobic003G107300 Sobic001G191200--Sobic003G107300 Sobic001G191200--Sobic001G423100 Sobic001G191200--Sobic001G225500 Sobic003G406700--Sobic001G191200 Sobic003G406700--Sobic001G377000 Sobic003G406700--Sobic009G154600 Sobic003G406700--Sobic003G107300 Sobic003G406700--Sobic001G423100 Sobic003G406700--Sobic001G225500 Sobic003G406700--Sobic006G279800 Sobic001G031300 Sobic001G031300 Sobic003G406700--Sobic001G031300 Sobic002G331000 Sobic002G331000 Sobic003G406700--Sobic002G331000 Sobic001G423100--Sobic009G154600 Sobic008G148400 Sobic008G148400 Sobic001G423100--Sobic008G148400 Sobic001G423100--Sobic001G191200 Sobic001G423100--Sobic003G406700 Sobic001G423100--Sobic001G078200 Sobic001G423100--Sobic001G031300 Sobic001G423100--Sobic006G279800 Sobic010G258300 Sobic010G258300 Sobic001G423100--Sobic010G258300 Sobic003G030400 Sobic003G030400 Sobic001G423100--Sobic003G030400 Sobic010G143400 Sobic010G143400 Sobic009G197000--Sobic010G143400 Sobic009G197000--Sobic005G085200 Sobic008G013900 Sobic008G013900 Sobic009G197000--Sobic008G013900 Sobic009G197000--Sobic004G345900 Sobic009G197000--Sobic001G191200 Sobic009G197000--Sobic002G331000 Sobic007G131200 Sobic007G131200 Sobic009G197000--Sobic007G131200 Sobic001G141300 Sobic001G141300 Sobic009G197000--Sobic001G141300 Sobic009G197000--Sobic003G406700 Sobic005G085600--Sobic005G085200 Sobic005G085600--Sobic007G189800 Sobic001G032100 Sobic001G032100 Sobic005G085600--Sobic001G032100 Sobic009G180200 Sobic009G180200 Sobic005G085600--Sobic009G180200 Sobic001G363100 Sobic001G363100 Sobic005G085600--Sobic001G363100 Sobic005G085600--Sobic009G159700 Sobic005G085600--Sobic004G199600 Sobic005G085600--Sobic009G078500 Sobic005G085600--Sobic010G057300 Sobic010G057300--Sobic005G085200 Sobic010G057300--Sobic004G285800 Sobic010G057300--Sobic004G345900 Sobic010G057300--Sobic010G057400 Sobic010G057300--Sobic004G199600 Sobic009G180100 Sobic009G180100 Sobic010G057300--Sobic009G180100 Sobic010G270300 Sobic010G270300 Sobic010G057300--Sobic010G270300 Sobic010G057300--Sobic005G085600 Sobic010G057300--Sobic007G189800 Sobic001G225400 Sobic001G225400 Sobic001G225500--Sobic001G225400 Sobic001G225500--Sobic001G377000 Sobic001G225500--Sobic001G191200 Sobic001G225500--Sobic003G406700 Sobic010G172200 Sobic010G172200 Sobic001G225500--Sobic010G172200 Sobic010G246600 Sobic010G246600 Sobic001G225500--Sobic010G246600 Sobic001G225500--Sobic009G213400 Sobic007G179750 Sobic007G179750 Sobic001G225500--Sobic007G179750 Sobic003G320600 Sobic003G320600 Sobic001G225500--Sobic003G320600 Sobic001G377000--Sobic001G191200 Sobic001G377000--Sobic009G213400 Sobic004G096300 Sobic004G096300 Sobic001G377000--Sobic004G096300 Sobic001G377000--Sobic003G406700 Sobic007G148200 Sobic007G148200 Sobic001G377000--Sobic007G148200 Sobic001G293800 Sobic001G293800 Sobic001G377000--Sobic001G293800 Sobic007G071000 Sobic007G071000 Sobic001G377000--Sobic007G071000 Sobic001G377000--Sobic010G172200 Sobic003G264901 Sobic003G264901 Sobic001G377000--Sobic003G264901
Octagon: transcription factors


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