Gene annotation
Transcriptome id Sobic.005G093400.1
Synonym Sb05g008070
Functional annotation expressed protein
UniProt A0A1B6PR85
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os11g11980.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.005G093400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G038100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.002G209100 glutamate receptor, putative, expressed -
3 Sobic.009G038200 expressed protein -
4 Sobic.009G205600 anthocyanidin 5,3-O-glucosyltransferase, putative, expressed -
5 Sobic.004G349300 tyrosine protein kinase domain containing protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
6 Sobic.003G264901 - -
7 Sobic.001G410450 - -
8 Sobic.009G233900 dehydrogenase, putative, expressed -
9 Sobic.004G195800 heavy metal associated domain containing protein, expressed -
10 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.005G000100 monoglyceride lipase, putative, expressed -
12 Sobic.003G013600 expressed protein -
13 Sobic.006G078500 abscisic stress-ripening, putative, expressed -
14 Sobic.008G109200 - -
15 Sobic.003G065600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
16 Sobic.004G217700 enzyme of the cupin superfamily protein, putative, expressed K06995: uncharacterized protein
17 Sobic.006G021900 Multidrug resistence-associated protein 4(PubMedID : 26320239)@ABC transporter family protein, putative, expressed K05665: ATP-binding cassette, subfamily C (CFTR/MRP), member 1
18 Sobic.001G315800 shikimate/quinate 5-dehydrogenase, putative, expressed -
19 Sobic.008G181300 expressed protein -
20 Sobic.003G402200 sensitivity to red light reduced protein 1, putative, expressed -


Gene co-expression network
sample Sobic005G093400 Sobic005G093400 Sobic008G038100 Sobic008G038100 Sobic005G093400--Sobic008G038100 Sobic002G209100 Sobic002G209100 Sobic005G093400--Sobic002G209100 Sobic009G038200 Sobic009G038200 Sobic005G093400--Sobic009G038200 Sobic009G205600 Sobic009G205600 Sobic005G093400--Sobic009G205600 Sobic004G349300 Sobic004G349300 Sobic005G093400--Sobic004G349300 Sobic003G264901 Sobic003G264901 Sobic005G093400--Sobic003G264901 Sobic001G410450 Sobic001G410450 Sobic005G093400--Sobic001G410450 Sobic009G233900 Sobic009G233900 Sobic005G093400--Sobic009G233900 Sobic004G195800 Sobic004G195800 Sobic005G093400--Sobic004G195800 Sobic001G056500 Sobic001G056500 Sobic008G038100--Sobic001G056500 Sobic003G310500 Sobic003G310500 Sobic008G038100--Sobic003G310500 Sobic009G216050 Sobic009G216050 Sobic008G038100--Sobic009G216050 Sobic009G014600 Sobic009G014600 Sobic008G038100--Sobic009G014600 Sobic008G038100--Sobic009G233900 Sobic008G181300 Sobic008G181300 Sobic008G038100--Sobic008G181300 Sobic004G217700 Sobic004G217700 Sobic008G038100--Sobic004G217700 Sobic003G385500 Sobic003G385500 Sobic008G038100--Sobic003G385500 Sobic006G045000 Sobic006G045000 Sobic008G038100--Sobic006G045000 Sobic002G209100--Sobic004G195800 Sobic002G041800 Sobic002G041800 Sobic002G209100--Sobic002G041800 Sobic005G085500 Sobic005G085500 Sobic002G209100--Sobic005G085500 Sobic010G120800 Sobic010G120800 Sobic002G209100--Sobic010G120800 Sobic009G252100 Sobic009G252100 Sobic002G209100--Sobic009G252100 Sobic002G209100--Sobic004G217700 Sobic002G271600 Sobic002G271600 Sobic002G209100--Sobic002G271600 Sobic004G209500 Sobic004G209500 Sobic002G209100--Sobic004G209500 Sobic002G257100 Sobic002G257100 Sobic002G209100--Sobic002G257100 Sobic003G284300 Sobic003G284300 Sobic009G038200--Sobic003G284300 Sobic005G063900 Sobic005G063900 Sobic009G038200--Sobic005G063900 Sobic001G321600 Sobic001G321600 Sobic009G038200--Sobic001G321600 Sobic001G019300 Sobic001G019300 Sobic009G038200--Sobic001G019300 Sobic005G190900 Sobic005G190900 Sobic009G038200--Sobic005G190900 Sobic001G449800 Sobic001G449800 Sobic009G038200--Sobic001G449800 Sobic009G038200--Sobic002G209100 Sobic009G153200 Sobic009G153200 Sobic009G038200--Sobic009G153200 Sobic009G038200--Sobic002G041800 Sobic009G205600--Sobic004G217700 Sobic003G402200 Sobic003G402200 Sobic009G205600--Sobic003G402200 Sobic009G205600--Sobic002G271600 Sobic009G205600--Sobic001G410450 Sobic007G014600 Sobic007G014600 Sobic009G205600--Sobic007G014600 Sobic009G205600--Sobic004G195800 Sobic009G205600--Sobic002G209100 Sobic006G060800 Sobic006G060800 Sobic009G205600--Sobic006G060800 Sobic004G187300 Sobic004G187300 Sobic009G205600--Sobic004G187300 Sobic004G349300--Sobic005G093400 Sobic009G245700 Sobic009G245700 Sobic004G349300--Sobic009G245700 Sobic001G258000 Sobic001G258000 Sobic004G349300--Sobic001G258000 Sobic001G528300 Sobic001G528300 Sobic004G349300--Sobic001G528300 Sobic002G193400 Sobic002G193400 Sobic004G349300--Sobic002G193400 Sobic002G117200 Sobic002G117200 Sobic004G349300--Sobic002G117200 Sobic004G349300--Sobic003G402200 Sobic002G027700 Sobic002G027700 Sobic004G349300--Sobic002G027700 Sobic004G349300--Sobic009G205600 Sobic004G096300 Sobic004G096300 Sobic003G264901--Sobic004G096300 Sobic010G172200 Sobic010G172200 Sobic003G264901--Sobic010G172200 Sobic001G293800 Sobic001G293800 Sobic003G264901--Sobic001G293800 Sobic006G053700 Sobic006G053700 Sobic003G264901--Sobic006G053700 Sobic007G071000 Sobic007G071000 Sobic003G264901--Sobic007G071000 Sobic001G377000 Sobic001G377000 Sobic003G264901--Sobic001G377000 Sobic003G264901--Sobic009G205600 Sobic003G153800 Sobic003G153800 Sobic003G264901--Sobic003G153800 Sobic001G053900 Sobic001G053900 Sobic003G264901--Sobic001G053900 Sobic001G056400 Sobic001G056400 Sobic001G410450--Sobic001G056400 Sobic001G012000 Sobic001G012000 Sobic001G410450--Sobic001G012000 Sobic005G182701 Sobic005G182701 Sobic001G410450--Sobic005G182701 SobicK044407 SobicK044407 Sobic001G410450--SobicK044407 Sobic002G423600 Sobic002G423600 Sobic001G410450--Sobic002G423600 Sobic007G055600 Sobic007G055600 Sobic001G410450--Sobic007G055600 Sobic001G410450--Sobic004G217700 Sobic001G410450--Sobic006G045000 Sobic007G076000 Sobic007G076000 Sobic001G410450--Sobic007G076000 Sobic009G233900--Sobic001G056500 Sobic009G075100 Sobic009G075100 Sobic009G233900--Sobic009G075100 Sobic009G233900--Sobic004G209500 Sobic009G233900--Sobic002G423600 Sobic004G078600 Sobic004G078600 Sobic009G233900--Sobic004G078600 Sobic009G233900--Sobic004G217700 Sobic001G201800 Sobic001G201800 Sobic009G233900--Sobic001G201800 Sobic009G233900--Sobic001G449800 Sobic009G115400 Sobic009G115400 Sobic009G233900--Sobic009G115400 Sobic004G195800--Sobic002G209100 Sobic004G195800--Sobic002G041800 Sobic004G195800--Sobic005G085500 Sobic004G195800--Sobic009G252100 Sobic004G195800--Sobic010G120800 Sobic004G195800--Sobic004G217700 Sobic004G195800--Sobic001G201800 Sobic004G195800--Sobic004G187300 Sobic005G193600 Sobic005G193600 Sobic004G195800--Sobic005G193600
Octagon: transcription factors


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