Gene annotation
Transcriptome id Sobic.008G109200.1
Synonym
Functional annotation -
UniProt A0A1B6PD08
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G031200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DSBA-like thioredoxin domain containing protein, expressed -
2 Sobic.005G093400 expressed protein -
3 Sobic.009G032100 nitrogen regulatory protein P-II, putative, expressed -
4 Sobic.009G245700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.004G309500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.009G024600 "RSR1(Ortholog in rice:Fu and Xue, 2010)"(PubMedID : 31659916)@"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis"(PubMedID : 28944535)@AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
7 Sobic.004G349300 tyrosine protein kinase domain containing protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
8 Sobic.003G264901 - -
9 Sobic.003G401400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RNA recognition motif containing protein, putative, expressed -
10 Sobic.008G185900 RNA recognition motif containing protein, expressed -
11 Sobic.008G074500 Probable leucine-rich repeat receptor-like protein kinase At5g49770(PubMedID : 31721651)@leucine-rich repeat family protein, putative, expressed -
12 Sobic.003G139000 aminotransferase, putative, expressed -
13 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
14 Sobic.007G127000 oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
15 Sobic.001G141300 RNA recognition motif containing protein, expressed -
16 Sobic.003G065600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed -
17 Sobic.005G000100 monoglyceride lipase, putative, expressed -
18 Sobic.007G020300 AT hook motif domain containing protein, expressed -
19 Sobic.001G162200 expressed protein -
20 Sobic.004G209500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic008G109200 Sobic008G109200 Sobic006G031200 Sobic006G031200 Sobic008G109200--Sobic006G031200 Sobic005G093400 Sobic005G093400 Sobic008G109200--Sobic005G093400 Sobic009G032100 Sobic009G032100 Sobic008G109200--Sobic009G032100 Sobic009G245700 Sobic009G245700 Sobic008G109200--Sobic009G245700 Sobic004G309500 Sobic004G309500 Sobic008G109200--Sobic004G309500 Sobic009G024600 Sobic009G024600 Sobic008G109200--Sobic009G024600 Sobic004G349300 Sobic004G349300 Sobic008G109200--Sobic004G349300 Sobic003G264901 Sobic003G264901 Sobic008G109200--Sobic003G264901 Sobic003G401400 Sobic003G401400 Sobic008G109200--Sobic003G401400 Sobic006G031200--Sobic008G109200 Sobic002G067300 Sobic002G067300 Sobic006G031200--Sobic002G067300 Sobic006G021900 Sobic006G021900 Sobic006G031200--Sobic006G021900 Sobic006G031200--Sobic005G093400 Sobic003G428900 Sobic003G428900 Sobic006G031200--Sobic003G428900 Sobic001G331000 Sobic001G331000 Sobic006G031200--Sobic001G331000 Sobic006G228200 Sobic006G228200 Sobic006G031200--Sobic006G228200 Sobic006G014000 Sobic006G014000 Sobic006G031200--Sobic006G014000 Sobic006G031200--Sobic004G349300 Sobic008G038100 Sobic008G038100 Sobic005G093400--Sobic008G038100 Sobic002G209100 Sobic002G209100 Sobic005G093400--Sobic002G209100 Sobic009G038200 Sobic009G038200 Sobic005G093400--Sobic009G038200 Sobic009G205600 Sobic009G205600 Sobic005G093400--Sobic009G205600 Sobic005G093400--Sobic004G349300 Sobic005G093400--Sobic003G264901 Sobic001G410450 Sobic001G410450 Sobic005G093400--Sobic001G410450 Sobic009G233900 Sobic009G233900 Sobic005G093400--Sobic009G233900 Sobic004G195800 Sobic004G195800 Sobic005G093400--Sobic004G195800 Sobic001G426400 Sobic001G426400 Sobic009G032100--Sobic001G426400 Sobic009G238100 Sobic009G238100 Sobic009G032100--Sobic009G238100 Sobic008G148400 Sobic008G148400 Sobic009G032100--Sobic008G148400 Sobic006G186000 Sobic006G186000 Sobic009G032100--Sobic006G186000 Sobic006G265400 Sobic006G265400 Sobic009G032100--Sobic006G265400 Sobic001G423100 Sobic001G423100 Sobic009G032100--Sobic001G423100 Sobic001G367500 Sobic001G367500 Sobic009G032100--Sobic001G367500 Sobic005G145300 Sobic005G145300 Sobic009G032100--Sobic005G145300 Sobic003G030400 Sobic003G030400 Sobic009G032100--Sobic003G030400 Sobic009G245700--Sobic003G264901 Sobic006G053700 Sobic006G053700 Sobic009G245700--Sobic006G053700 Sobic001G293800 Sobic001G293800 Sobic009G245700--Sobic001G293800 Sobic004G096300 Sobic004G096300 Sobic009G245700--Sobic004G096300 Sobic004G275200 Sobic004G275200 Sobic009G245700--Sobic004G275200 Sobic005G129400 Sobic005G129400 Sobic009G245700--Sobic005G129400 Sobic007G148200 Sobic007G148200 Sobic009G245700--Sobic007G148200 Sobic009G245700--Sobic004G349300 Sobic002G130700 Sobic002G130700 Sobic009G245700--Sobic002G130700 Sobic005G000100 Sobic005G000100 Sobic004G309500--Sobic005G000100 Sobic002G117200 Sobic002G117200 Sobic004G309500--Sobic002G117200 Sobic004G352900 Sobic004G352900 Sobic004G309500--Sobic004G352900 Sobic004G309500--Sobic003G401400 Sobic009G156300 Sobic009G156300 Sobic004G309500--Sobic009G156300 Sobic001G321500 Sobic001G321500 Sobic004G309500--Sobic001G321500 Sobic001G202400 Sobic001G202400 Sobic004G309500--Sobic001G202400 Sobic004G014000 Sobic004G014000 Sobic004G309500--Sobic004G014000 Sobic001G022600 Sobic001G022600 Sobic004G309500--Sobic001G022600 Sobic009G129500 Sobic009G129500 Sobic009G024600--Sobic009G129500 Sobic009G024600--Sobic005G000100 Sobic001G131100 Sobic001G131100 Sobic009G024600--Sobic001G131100 Sobic005G107300 Sobic005G107300 Sobic009G024600--Sobic005G107300 Sobic009G024600--Sobic004G014000 Sobic003G116700 Sobic003G116700 Sobic009G024600--Sobic003G116700 Sobic007G079700 Sobic007G079700 Sobic009G024600--Sobic007G079700 Sobic002G016300 Sobic002G016300 Sobic009G024600--Sobic002G016300 Sobic001G208300 Sobic001G208300 Sobic009G024600--Sobic001G208300 Sobic004G349300--Sobic005G093400 Sobic004G349300--Sobic009G245700 Sobic001G258000 Sobic001G258000 Sobic004G349300--Sobic001G258000 Sobic001G528300 Sobic001G528300 Sobic004G349300--Sobic001G528300 Sobic002G193400 Sobic002G193400 Sobic004G349300--Sobic002G193400 Sobic004G349300--Sobic002G117200 Sobic003G402200 Sobic003G402200 Sobic004G349300--Sobic003G402200 Sobic002G027700 Sobic002G027700 Sobic004G349300--Sobic002G027700 Sobic004G349300--Sobic009G205600 Sobic003G264901--Sobic004G096300 Sobic010G172200 Sobic010G172200 Sobic003G264901--Sobic010G172200 Sobic003G264901--Sobic001G293800 Sobic003G264901--Sobic006G053700 Sobic007G071000 Sobic007G071000 Sobic003G264901--Sobic007G071000 Sobic001G377000 Sobic001G377000 Sobic003G264901--Sobic001G377000 Sobic003G264901--Sobic009G205600 Sobic003G153800 Sobic003G153800 Sobic003G264901--Sobic003G153800 Sobic001G053900 Sobic001G053900 Sobic003G264901--Sobic001G053900 Sobic001G141300 Sobic001G141300 Sobic003G401400--Sobic001G141300 Sobic008G185900 Sobic008G185900 Sobic003G401400--Sobic008G185900 Sobic002G376400 Sobic002G376400 Sobic003G401400--Sobic002G376400 Sobic001G081400 Sobic001G081400 Sobic003G401400--Sobic001G081400 Sobic003G401400--Sobic004G309500 Sobic007G034400 Sobic007G034400 Sobic003G401400--Sobic007G034400 Sobic008G171800 Sobic008G171800 Sobic003G401400--Sobic008G171800 Sobic003G401400--Sobic001G202400 Sobic004G028400 Sobic004G028400 Sobic003G401400--Sobic004G028400
Octagon: transcription factors


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