Gene annotation
Transcriptome id Sobic.003G139000.1
Synonym Sb03g011850
Functional annotation aminotransferase, putative, expressed
UniProt C5XI09
Pfam PF00266
Panther DB PTHR11601 PTHR11601:SF37
NCBI CDD KOG1549; Cysteine desulfurase NFS1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G62130 : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein
RAP-DB (Rice) LOC_Os01g18640.1 : aminotransferase, putative, expressed
MaizeGDB (Corn) Zm00025a035148 , Zm00025a024227
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G528300 heavy metal-associated domain containing protein, expressed -
2 Sobic.006G014000 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
3 Sobic.009G113700 peroxidase precursor, putative, expressed K00430: peroxidase
4 Sobic.003G215200 expressed protein -
5 Sobic.007G157900 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.006G009000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger family protein, putative, expressed -
7 Sobic.009G065300 expressed protein -
8 Sobic.002G327100 expressed protein -
9 Sobic.010G192900 expressed protein -
10 Sobic.007G127100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@oxidoreductase, 2OG-FeII oxygenase domain containing protein, putative, expressed -
11 Sobic.008G036900 MYB family transcription factor, putative, expressed -
12 Sobic.010G003700 scarecrow, putative, expressed -
13 Sobic.003G111100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pathogen-related protein, putative, expressed -
14 Sobic.006G068800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydrolase, alpha/beta fold family protein, putative, expressed -
15 Sobic.001G289100 cyclase/dehydrase family protein, putative, expressed K14496: abscisic acid receptor PYR/PYL family
16 Sobic.003G417100 esterase, putative, expressed -
17 Sobic.004G351500 - -
18 Sobic.001G087900 expressed protein -
19 Sobic.002G232700 clathrin assembly protein, putative, expressed -
20 Sobic.001G328800 expressed protein -


Gene co-expression network
sample Sobic003G139000 Sobic003G139000 Sobic001G528300 Sobic001G528300 Sobic003G139000--Sobic001G528300 Sobic006G014000 Sobic006G014000 Sobic003G139000--Sobic006G014000 Sobic009G113700 Sobic009G113700 Sobic003G139000--Sobic009G113700 Sobic003G215200 Sobic003G215200 Sobic003G139000--Sobic003G215200 Sobic007G157900 Sobic007G157900 Sobic003G139000--Sobic007G157900 Sobic006G009000 Sobic006G009000 Sobic003G139000--Sobic006G009000 Sobic009G065300 Sobic009G065300 Sobic003G139000--Sobic009G065300 Sobic002G327100 Sobic002G327100 Sobic003G139000--Sobic002G327100 Sobic010G192900 Sobic010G192900 Sobic003G139000--Sobic010G192900 Sobic001G528300--Sobic003G139000 Sobic004G349300 Sobic004G349300 Sobic001G528300--Sobic004G349300 Sobic001G258000 Sobic001G258000 Sobic001G528300--Sobic001G258000 Sobic001G162200 Sobic001G162200 Sobic001G528300--Sobic001G162200 Sobic001G528300--Sobic006G014000 Sobic002G016300 Sobic002G016300 Sobic001G528300--Sobic002G016300 Sobic002G117200 Sobic002G117200 Sobic001G528300--Sobic002G117200 Sobic003G299800 Sobic003G299800 Sobic001G528300--Sobic003G299800 Sobic007G020300 Sobic007G020300 Sobic001G528300--Sobic007G020300 Sobic006G014000--Sobic003G139000 Sobic003G157700 Sobic003G157700 Sobic006G014000--Sobic003G157700 Sobic010G122800 Sobic010G122800 Sobic006G014000--Sobic010G122800 Sobic006G014000--Sobic003G215200 Sobic006G008400 Sobic006G008400 Sobic006G014000--Sobic006G008400 Sobic001G087900 Sobic001G087900 Sobic006G014000--Sobic001G087900 Sobic006G014000--Sobic007G157900 Sobic001G131100 Sobic001G131100 Sobic006G014000--Sobic001G131100 Sobic008G043700 Sobic008G043700 Sobic006G014000--Sobic008G043700 Sobic009G113700--Sobic006G009000 Sobic009G113700--Sobic003G139000 Sobic006G009100 Sobic006G009100 Sobic009G113700--Sobic006G009100 Sobic001G536500 Sobic001G536500 Sobic009G113700--Sobic001G536500 Sobic004G351500 Sobic004G351500 Sobic009G113700--Sobic004G351500 Sobic009G113700--Sobic002G327100 Sobic009G113700--Sobic006G014000 Sobic009G113700--Sobic001G087900 Sobic006G102650 Sobic006G102650 Sobic009G113700--Sobic006G102650 Sobic003G417100 Sobic003G417100 Sobic003G215200--Sobic003G417100 Sobic006G230300 Sobic006G230300 Sobic003G215200--Sobic006G230300 Sobic004G262200 Sobic004G262200 Sobic003G215200--Sobic004G262200 Sobic003G157600 Sobic003G157600 Sobic003G215200--Sobic003G157600 Sobic010G194100 Sobic010G194100 Sobic003G215200--Sobic010G194100 Sobic006G157900 Sobic006G157900 Sobic003G215200--Sobic006G157900 Sobic002G183700 Sobic002G183700 Sobic003G215200--Sobic002G183700 Sobic002G042200 Sobic002G042200 Sobic003G215200--Sobic002G042200 Sobic003G228600 Sobic003G228600 Sobic003G215200--Sobic003G228600 Sobic009G238900 Sobic009G238900 Sobic007G157900--Sobic009G238900 Sobic007G157900--Sobic004G351500 Sobic007G157900--Sobic010G194100 Sobic002G232700 Sobic002G232700 Sobic007G157900--Sobic002G232700 Sobic009G054100 Sobic009G054100 Sobic007G157900--Sobic009G054100 Sobic007G157900--Sobic003G417100 Sobic004G062500 Sobic004G062500 Sobic007G157900--Sobic004G062500 Sobic004G262500 Sobic004G262500 Sobic007G157900--Sobic004G262500 Sobic007G127100 Sobic007G127100 Sobic007G157900--Sobic007G127100 Sobic006G009000--Sobic006G009100 Sobic006G009000--Sobic010G192900 Sobic006G009000--Sobic002G327100 Sobic006G009000--Sobic009G065300 Sobic006G255400 Sobic006G255400 Sobic006G009000--Sobic006G255400 Sobic006G009000--Sobic007G127100 Sobic006G050800 Sobic006G050800 Sobic006G009000--Sobic006G050800 Sobic006G068800 Sobic006G068800 Sobic006G009000--Sobic006G068800 Sobic003G360200 Sobic003G360200 Sobic006G009000--Sobic003G360200 Sobic002G327300 Sobic002G327300 Sobic009G065300--Sobic002G327300 Sobic001G234800 Sobic001G234800 Sobic009G065300--Sobic001G234800 Sobic009G065300--Sobic002G327100 Sobic003G228200 Sobic003G228200 Sobic009G065300--Sobic003G228200 Sobic003G416300 Sobic003G416300 Sobic009G065300--Sobic003G416300 Sobic003G037500 Sobic003G037500 Sobic009G065300--Sobic003G037500 Sobic009G065300--Sobic007G127100 Sobic001G318500 Sobic001G318500 Sobic009G065300--Sobic001G318500 Sobic002G302500 Sobic002G302500 Sobic009G065300--Sobic002G302500 Sobic004G295100 Sobic004G295100 Sobic002G327100--Sobic004G295100 Sobic008G009400 Sobic008G009400 Sobic002G327100--Sobic008G009400 Sobic002G327100--Sobic006G009100 Sobic002G327100--Sobic003G228200 Sobic002G327100--Sobic002G327300 Sobic001G330300 Sobic001G330300 Sobic002G327100--Sobic001G330300 Sobic003G311800 Sobic003G311800 Sobic002G327100--Sobic003G311800 Sobic002G176100 Sobic002G176100 Sobic002G327100--Sobic002G176100 Sobic003G299300 Sobic003G299300 Sobic002G327100--Sobic003G299300 Sobic010G192900--Sobic006G068800 Sobic010G192900--Sobic002G327100 Sobic010G192900--Sobic003G037500 Sobic004G297900 Sobic004G297900 Sobic010G192900--Sobic004G297900 Sobic010G192900--Sobic006G009000 Sobic010G192900--Sobic006G009100 Sobic010G192900--Sobic003G228200 Sobic010G192900--Sobic006G255400 Sobic010G192900--Sobic003G311800
Octagon: transcription factors


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