Gene annotation
Transcriptome id Sobic.001G528300.1
Synonym Sb01g049160
Functional annotation heavy metal-associated domain containing protein, expressed
UniProt C5X0X3
Pfam PF00403
Panther DB PTHR22814:SF136 PTHR22814
NCBI CDD KOG1603; Copper chaperone
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G18196 : Heavy metal transport/detoxification superfamily protein
RAP-DB (Rice) LOC_Os03g02860.1 : heavy metal-associated domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000284 , Zm00025a003168
Brachypodium KQK23934
Barley HORVU4Hr1G085090.6 , HORVU4Hr1G085090.7 , HORVU4Hr1G085090.4 , HORVU4Hr1G085090.5 , HORVU4Hr1G085090.2 , HORVU4Hr1G085090.3 , HORVU4Hr1G085090.1 , HORVU4Hr1G085090.8 , HORVU4Hr1G085090.9
Wheat TraesCS4B02G348900 , TraesCS5A02G516900 , TraesCS4D02G343300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G139000 aminotransferase, putative, expressed -
2 Sobic.004G349300 tyrosine protein kinase domain containing protein, putative, expressed K04730: interleukin-1 receptor-associated kinase 1
3 Sobic.001G258000 tyrosine protein kinase domain containing protein, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
4 Sobic.001G162200 expressed protein -
5 Sobic.006G014000 erythronate-4-phosphate dehydrogenase domain containing protein, expressed K15919: glyoxylate/hydroxypyruvate reductase
6 Sobic.002G016300 MYB family transcription factor, putative, expressed -
7 Sobic.002G117200 B4-BTB4 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with B4 subfamily conserved sequence, expressed -
8 Sobic.003G299800 RING-H2 finger protein, putative, expressed K19038: E3 ubiquitin-protein ligase ATL41
9 Sobic.007G020300 AT hook motif domain containing protein, expressed -
10 Sobic.009G113700 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.009G245700 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.002G067300 ATPase, putative, expressed -
13 Sobic.010G115500 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
14 Sobic.002G427900 wound-induced protein WI12, putative, expressed -
15 Sobic.009G024600 "RSR1(Ortholog in rice:Fu and Xue, 2010)"(PubMedID : 31659916)@"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis"(PubMedID : 28944535)@AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
16 Sobic.002G338300 expressed protein -
17 Sobic.003G320600 membrane protein, putative, expressed -
18 Sobic.004G352900 expressed protein -
19 Sobic.001G294000 LOL3, putative, expressed -
20 Sobic.008G036900 MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic001G528300 Sobic001G528300 Sobic003G139000 Sobic003G139000 Sobic001G528300--Sobic003G139000 Sobic004G349300 Sobic004G349300 Sobic001G528300--Sobic004G349300 Sobic001G258000 Sobic001G258000 Sobic001G528300--Sobic001G258000 Sobic001G162200 Sobic001G162200 Sobic001G528300--Sobic001G162200 Sobic006G014000 Sobic006G014000 Sobic001G528300--Sobic006G014000 Sobic002G016300 Sobic002G016300 Sobic001G528300--Sobic002G016300 Sobic002G117200 Sobic002G117200 Sobic001G528300--Sobic002G117200 Sobic003G299800 Sobic003G299800 Sobic001G528300--Sobic003G299800 Sobic007G020300 Sobic007G020300 Sobic001G528300--Sobic007G020300 Sobic003G139000--Sobic001G528300 Sobic003G139000--Sobic006G014000 Sobic009G113700 Sobic009G113700 Sobic003G139000--Sobic009G113700 Sobic003G215200 Sobic003G215200 Sobic003G139000--Sobic003G215200 Sobic007G157900 Sobic007G157900 Sobic003G139000--Sobic007G157900 Sobic006G009000 Sobic006G009000 Sobic003G139000--Sobic006G009000 Sobic009G065300 Sobic009G065300 Sobic003G139000--Sobic009G065300 Sobic002G327100 Sobic002G327100 Sobic003G139000--Sobic002G327100 Sobic010G192900 Sobic010G192900 Sobic003G139000--Sobic010G192900 Sobic005G093400 Sobic005G093400 Sobic004G349300--Sobic005G093400 Sobic009G245700 Sobic009G245700 Sobic004G349300--Sobic009G245700 Sobic004G349300--Sobic001G258000 Sobic004G349300--Sobic001G528300 Sobic002G193400 Sobic002G193400 Sobic004G349300--Sobic002G193400 Sobic004G349300--Sobic002G117200 Sobic003G402200 Sobic003G402200 Sobic004G349300--Sobic003G402200 Sobic002G027700 Sobic002G027700 Sobic004G349300--Sobic002G027700 Sobic009G205600 Sobic009G205600 Sobic004G349300--Sobic009G205600 Sobic007G079700 Sobic007G079700 Sobic001G258000--Sobic007G079700 Sobic001G427500 Sobic001G427500 Sobic001G258000--Sobic001G427500 Sobic005G096300 Sobic005G096300 Sobic001G258000--Sobic005G096300 Sobic009G114800 Sobic009G114800 Sobic001G258000--Sobic009G114800 Sobic004G027900 Sobic004G027900 Sobic001G258000--Sobic004G027900 Sobic001G258000--Sobic004G349300 Sobic007G062500 Sobic007G062500 Sobic001G258000--Sobic007G062500 Sobic001G053900 Sobic001G053900 Sobic001G258000--Sobic001G053900 Sobic004G181500 Sobic004G181500 Sobic001G258000--Sobic004G181500 Sobic008G074500 Sobic008G074500 Sobic001G162200--Sobic008G074500 Sobic001G442500 Sobic001G442500 Sobic001G162200--Sobic001G442500 Sobic001G162200--Sobic006G014000 Sobic001G162200--Sobic001G528300 Sobic001G162200--Sobic004G349300 Sobic009G038200 Sobic009G038200 Sobic001G162200--Sobic009G038200 Sobic003G237000 Sobic003G237000 Sobic001G162200--Sobic003G237000 Sobic006G031200 Sobic006G031200 Sobic001G162200--Sobic006G031200 Sobic001G384500 Sobic001G384500 Sobic001G162200--Sobic001G384500 Sobic006G014000--Sobic003G139000 Sobic003G157700 Sobic003G157700 Sobic006G014000--Sobic003G157700 Sobic010G122800 Sobic010G122800 Sobic006G014000--Sobic010G122800 Sobic006G014000--Sobic003G215200 Sobic006G008400 Sobic006G008400 Sobic006G014000--Sobic006G008400 Sobic001G087900 Sobic001G087900 Sobic006G014000--Sobic001G087900 Sobic006G014000--Sobic007G157900 Sobic001G131100 Sobic001G131100 Sobic006G014000--Sobic001G131100 Sobic008G043700 Sobic008G043700 Sobic006G014000--Sobic008G043700 Sobic002G367700 Sobic002G367700 Sobic002G016300--Sobic002G367700 Sobic009G024600 Sobic009G024600 Sobic002G016300--Sobic009G024600 Sobic006G241350 Sobic006G241350 Sobic002G016300--Sobic006G241350 Sobic006G051100 Sobic006G051100 Sobic002G016300--Sobic006G051100 Sobic002G328100 Sobic002G328100 Sobic002G016300--Sobic002G328100 Sobic002G376700 Sobic002G376700 Sobic002G016300--Sobic002G376700 Sobic003G123300 Sobic003G123300 Sobic002G016300--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic002G016300--Sobic001G078900 Sobic002G016300--Sobic005G096300 Sobic009G156300 Sobic009G156300 Sobic002G117200--Sobic009G156300 Sobic004G352900 Sobic004G352900 Sobic002G117200--Sobic004G352900 Sobic003G003000 Sobic003G003000 Sobic002G117200--Sobic003G003000 Sobic001G285000 Sobic001G285000 Sobic002G117200--Sobic001G285000 Sobic009G131100 Sobic009G131100 Sobic002G117200--Sobic009G131100 Sobic002G123200 Sobic002G123200 Sobic002G117200--Sobic002G123200 Sobic001G022600 Sobic001G022600 Sobic002G117200--Sobic001G022600 Sobic004G060600 Sobic004G060600 Sobic002G117200--Sobic004G060600 Sobic009G080200 Sobic009G080200 Sobic002G117200--Sobic009G080200 Sobic001G225600 Sobic001G225600 Sobic003G299800--Sobic001G225600 Sobic003G299800--Sobic004G352900 Sobic002G427900 Sobic002G427900 Sobic003G299800--Sobic002G427900 Sobic001G530350 Sobic001G530350 Sobic003G299800--Sobic001G530350 Sobic003G299800--Sobic001G285000 Sobic001G410100 Sobic001G410100 Sobic003G299800--Sobic001G410100 Sobic009G249000 Sobic009G249000 Sobic003G299800--Sobic009G249000 Sobic009G100800 Sobic009G100800 Sobic003G299800--Sobic009G100800 Sobic001G526900 Sobic001G526900 Sobic003G299800--Sobic001G526900 Sobic006G130501 Sobic006G130501 Sobic007G020300--Sobic006G130501 Sobic006G213100 Sobic006G213100 Sobic007G020300--Sobic006G213100 Sobic007G035600 Sobic007G035600 Sobic007G020300--Sobic007G035600 Sobic006G098200 Sobic006G098200 Sobic007G020300--Sobic006G098200 Sobic001G216600 Sobic001G216600 Sobic007G020300--Sobic001G216600 Sobic004G086100 Sobic004G086100 Sobic007G020300--Sobic004G086100 Sobic005G096000 Sobic005G096000 Sobic007G020300--Sobic005G096000 Sobic007G020300--Sobic005G096300 Sobic002G017300 Sobic002G017300 Sobic007G020300--Sobic002G017300
Octagon: transcription factors


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