Gene annotation
Transcriptome id Sobic.002G016300.1
Synonym Sb02g001600
Functional annotation MYB family transcription factor, putative, expressed
UniProt C5X809
Pfam PF00249
Panther DB PTHR31003 PTHR31003:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G03500 : Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os07g02800.2 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a016221 , Zm00025a044921
Brachypodium KQK13040
Barley -
Wheat TraesCS2B02G277300 , TraesCS2D02G259200 , TraesCS2D02G259200 , TraesCS2A02G264800 , TraesCS2A02G264800
Populus -


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cDNA sequences
Sobic.002G016300


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
2 Sobic.009G024600 "RSR1(Ortholog in rice:Fu and Xue, 2010)"(PubMedID : 31659916)@"AP2-like TF, coexpress with genes associated with the hormonesignaling pathway, floral development in Arabidopsis"(PubMedID : 28944535)@AP2 domain containing protein, expressed K09284: AP2-like factor, euAP2 lineage
3 Sobic.006G241350 - -
4 Sobic.006G051100 expressed protein -
5 Sobic.002G328100 TKL_IRAK_DUF26-lc.18 - DUF26 kinases have homology to DUF26 containing loci, expressed -
6 Sobic.002G376700 EF hand family protein, putative -
7 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
8 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -
9 Sobic.005G096300 Up-regulated in Setosphaeria turcica resistant genotype GA06/18 by S. turcica inoculation(PubMedID : 22050783)@-(PubMedID : 25928459)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
10 Sobic.001G225500 expressed protein -
11 Sobic.005G085600 OsFBK25 - F-box domain and kelch repeat containing protein, expressed -
12 Sobic.001G528300 heavy metal-associated domain containing protein, expressed -
13 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
14 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
15 Sobic.006G241400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@expressed protein -
16 Sobic.006G241600 expressed protein -
17 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
18 Sobic.007G020300 AT hook motif domain containing protein, expressed -
19 Sobic.005G046500 protein kinase family protein, putative, expressed -
20 Sobic.001G225400 expressed protein -


Gene co-expression network
sample Sobic002G016300 Sobic002G016300 Sobic002G367700 Sobic002G367700 Sobic002G016300--Sobic002G367700 Sobic009G024600 Sobic009G024600 Sobic002G016300--Sobic009G024600 Sobic006G241350 Sobic006G241350 Sobic002G016300--Sobic006G241350 Sobic006G051100 Sobic006G051100 Sobic002G016300--Sobic006G051100 Sobic002G328100 Sobic002G328100 Sobic002G016300--Sobic002G328100 Sobic002G376700 Sobic002G376700 Sobic002G016300--Sobic002G376700 Sobic003G123300 Sobic003G123300 Sobic002G016300--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic002G016300--Sobic001G078900 Sobic005G096300 Sobic005G096300 Sobic002G016300--Sobic005G096300 Sobic002G367700--Sobic006G241350 Sobic002G367700--Sobic003G123300 Sobic002G367700--Sobic001G078900 Sobic002G367700--Sobic006G051100 Sobic001G465100 Sobic001G465100 Sobic002G367700--Sobic001G465100 Sobic004G325900 Sobic004G325900 Sobic002G367700--Sobic004G325900 Sobic002G367700--Sobic002G016300 Sobic007G028700 Sobic007G028700 Sobic002G367700--Sobic007G028700 Sobic006G241400 Sobic006G241400 Sobic002G367700--Sobic006G241400 Sobic009G129500 Sobic009G129500 Sobic009G024600--Sobic009G129500 Sobic005G000100 Sobic005G000100 Sobic009G024600--Sobic005G000100 Sobic001G131100 Sobic001G131100 Sobic009G024600--Sobic001G131100 Sobic005G107300 Sobic005G107300 Sobic009G024600--Sobic005G107300 Sobic004G014000 Sobic004G014000 Sobic009G024600--Sobic004G014000 Sobic003G116700 Sobic003G116700 Sobic009G024600--Sobic003G116700 Sobic007G079700 Sobic007G079700 Sobic009G024600--Sobic007G079700 Sobic009G024600--Sobic002G016300 Sobic001G208300 Sobic001G208300 Sobic009G024600--Sobic001G208300 Sobic006G241350--Sobic006G241400 Sobic004G279700 Sobic004G279700 Sobic006G241350--Sobic004G279700 Sobic006G241350--Sobic004G325900 Sobic006G241600 Sobic006G241600 Sobic006G241350--Sobic006G241600 Sobic006G241350--Sobic007G028700 Sobic006G241350--Sobic002G367700 Sobic006G241350--Sobic001G078900 Sobic006G241350--Sobic003G123300 Sobic006G241350--Sobic001G465100 Sobic003G320600 Sobic003G320600 Sobic006G051100--Sobic003G320600 Sobic006G051100--Sobic003G123300 Sobic001G093600 Sobic001G093600 Sobic006G051100--Sobic001G093600 Sobic003G107300 Sobic003G107300 Sobic006G051100--Sobic003G107300 Sobic006G279700 Sobic006G279700 Sobic006G051100--Sobic006G279700 Sobic003G178700 Sobic003G178700 Sobic006G051100--Sobic003G178700 Sobic006G051100--Sobic002G367700 Sobic001G225500 Sobic001G225500 Sobic006G051100--Sobic001G225500 Sobic001G191200 Sobic001G191200 Sobic006G051100--Sobic001G191200 Sobic003G049500 Sobic003G049500 Sobic002G328100--Sobic003G049500 Sobic003G368800 Sobic003G368800 Sobic002G328100--Sobic003G368800 Sobic004G147200 Sobic004G147200 Sobic002G328100--Sobic004G147200 Sobic009G112400 Sobic009G112400 Sobic002G328100--Sobic009G112400 Sobic003G245900 Sobic003G245900 Sobic002G328100--Sobic003G245900 Sobic002G133100 Sobic002G133100 Sobic002G328100--Sobic002G133100 Sobic003G052600 Sobic003G052600 Sobic002G328100--Sobic003G052600 Sobic002G259400 Sobic002G259400 Sobic002G328100--Sobic002G259400 Sobic001G144600 Sobic001G144600 Sobic002G328100--Sobic001G144600 Sobic001G217700 Sobic001G217700 Sobic002G376700--Sobic001G217700 Sobic001G053900 Sobic001G053900 Sobic002G376700--Sobic001G053900 Sobic005G002600 Sobic005G002600 Sobic002G376700--Sobic005G002600 Sobic002G376700--Sobic001G465100 Sobic002G376700--Sobic003G320600 Sobic010G214000 Sobic010G214000 Sobic002G376700--Sobic010G214000 Sobic010G246600 Sobic010G246600 Sobic002G376700--Sobic010G246600 Sobic004G113800 Sobic004G113800 Sobic002G376700--Sobic004G113800 Sobic001G291200 Sobic001G291200 Sobic002G376700--Sobic001G291200 Sobic003G013600 Sobic003G013600 Sobic003G123300--Sobic003G013600 Sobic003G123300--Sobic001G465100 Sobic003G123300--Sobic006G051100 Sobic001G225600 Sobic001G225600 Sobic003G123300--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic003G123300--Sobic002G421600 Sobic003G123300--Sobic006G241350 Sobic003G123300--Sobic002G367700 Sobic001G530350 Sobic001G530350 Sobic003G123300--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G123300--Sobic010G267000 Sobic001G078900--Sobic004G325900 Sobic001G078900--Sobic001G465100 Sobic001G078900--Sobic006G241350 Sobic002G226000 Sobic002G226000 Sobic001G078900--Sobic002G226000 Sobic001G078900--Sobic002G367700 Sobic001G078900--Sobic003G123300 Sobic001G078900--Sobic003G178700 Sobic003G147401 Sobic003G147401 Sobic001G078900--Sobic003G147401 Sobic002G380400 Sobic002G380400 Sobic001G078900--Sobic002G380400 Sobic007G035600 Sobic007G035600 Sobic005G096300--Sobic007G035600 Sobic010G280100 Sobic010G280100 Sobic005G096300--Sobic010G280100 Sobic010G111800 Sobic010G111800 Sobic005G096300--Sobic010G111800 Sobic003G154700 Sobic003G154700 Sobic005G096300--Sobic003G154700 Sobic009G232700 Sobic009G232700 Sobic005G096300--Sobic009G232700 Sobic010G242300 Sobic010G242300 Sobic005G096300--Sobic010G242300 Sobic004G119000 Sobic004G119000 Sobic005G096300--Sobic004G119000 Sobic004G150400 Sobic004G150400 Sobic005G096300--Sobic004G150400 Sobic001G368400 Sobic001G368400 Sobic005G096300--Sobic001G368400
Octagon: transcription factors


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