Gene annotation
Transcriptome id Sobic.001G078900.2,Sobic.001G078900.1
Synonym Sb01g007130, HRS1
Functional annotation MYB (PubMedID : 28944535)
MYB family transcription factor, putative, expressed
UniProt A0A120GUS8 , A0A1B6QHV1 , A0A1B6QHU6
Pfam PF00249
Panther DB PTHR31003 PTHR31003:SF6
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37180 : myb-like transcription factor family protein,Homeodomain-like superfamily protein
RAP-DB (Rice) LOC_Os03g55590.1 : MYB family transcription factor, putative, expressed
MaizeGDB (Corn) Zm00025a044921 , Zm00025a016729 , Zm00025a008285
Brachypodium KQK13040
Barley HORVU5Hr1G097560.2 , HORVU5Hr1G097560.3 , HORVU5Hr1G097560.4 , HORVU5Hr1G097560.5 , HORVU5Hr1G097560.6 , HORVU5Hr1G097560.7
Wheat TraesCS5A02G401600 , TraesCS2D02G259200 , TraesCS2D02G259200 , TraesCS2A02G264800 , TraesCS2A02G264800 , TraesCS5D02G411800
Populus -


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cDNA sequences
Sobic.001G078900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G325900 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
2 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
3 Sobic.006G241350 - -
4 Sobic.002G226000 leucine-rich repeat family protein, putative, expressed -
5 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
6 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
7 Sobic.003G178700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
8 Sobic.003G147401 - -
9 Sobic.002G380400 heavy metal-associated domain containing protein, expressed -
10 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
11 Sobic.005G002600 - -
12 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
13 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
14 Sobic.008G042500 expressed protein -
15 Sobic.002G246600 helix-loop-helix DNA-binding domain containing protein, expressed -
16 Sobic.007G154701 - -
17 Sobic.006G241600 expressed protein -
18 Sobic.007G028700 LSD1 zinc finger domain containing protein, expressed -
19 Sobic.006G051100 expressed protein -
20 Sobic.010G280100 expressed protein -


Gene co-expression network
sample Sobic001G078900 Sobic001G078900 Sobic004G325900 Sobic004G325900 Sobic001G078900--Sobic004G325900 Sobic001G465100 Sobic001G465100 Sobic001G078900--Sobic001G465100 Sobic006G241350 Sobic006G241350 Sobic001G078900--Sobic006G241350 Sobic002G226000 Sobic002G226000 Sobic001G078900--Sobic002G226000 Sobic002G367700 Sobic002G367700 Sobic001G078900--Sobic002G367700 Sobic003G123300 Sobic003G123300 Sobic001G078900--Sobic003G123300 Sobic003G178700 Sobic003G178700 Sobic001G078900--Sobic003G178700 Sobic003G147401 Sobic003G147401 Sobic001G078900--Sobic003G147401 Sobic002G380400 Sobic002G380400 Sobic001G078900--Sobic002G380400 Sobic004G325900--Sobic001G078900 Sobic007G154701 Sobic007G154701 Sobic004G325900--Sobic007G154701 Sobic004G325900--Sobic006G241350 Sobic004G325900--Sobic001G465100 Sobic004G325900--Sobic003G147401 Sobic004G325900--Sobic003G123300 Sobic006G241600 Sobic006G241600 Sobic004G325900--Sobic006G241600 Sobic003G379700 Sobic003G379700 Sobic004G325900--Sobic003G379700 Sobic001G032100 Sobic001G032100 Sobic004G325900--Sobic001G032100 Sobic008G042500 Sobic008G042500 Sobic001G465100--Sobic008G042500 Sobic003G391100 Sobic003G391100 Sobic001G465100--Sobic003G391100 Sobic001G465100--Sobic003G123300 Sobic001G465100--Sobic001G078900 Sobic001G465100--Sobic004G325900 Sobic002G376700 Sobic002G376700 Sobic001G465100--Sobic002G376700 Sobic001G465100--Sobic006G241350 Sobic004G096300 Sobic004G096300 Sobic001G465100--Sobic004G096300 Sobic001G053900 Sobic001G053900 Sobic001G465100--Sobic001G053900 Sobic006G241400 Sobic006G241400 Sobic006G241350--Sobic006G241400 Sobic004G279700 Sobic004G279700 Sobic006G241350--Sobic004G279700 Sobic006G241350--Sobic004G325900 Sobic006G241350--Sobic006G241600 Sobic007G028700 Sobic007G028700 Sobic006G241350--Sobic007G028700 Sobic006G241350--Sobic002G367700 Sobic006G241350--Sobic001G078900 Sobic006G241350--Sobic003G123300 Sobic006G241350--Sobic001G465100 Sobic009G198900 Sobic009G198900 Sobic002G226000--Sobic009G198900 Sobic003G324000 Sobic003G324000 Sobic002G226000--Sobic003G324000 Sobic007G148200 Sobic007G148200 Sobic002G226000--Sobic007G148200 Sobic001G543800 Sobic001G543800 Sobic002G226000--Sobic001G543800 Sobic001G194900 Sobic001G194900 Sobic002G226000--Sobic001G194900 Sobic004G153400 Sobic004G153400 Sobic002G226000--Sobic004G153400 Sobic010G280100 Sobic010G280100 Sobic002G226000--Sobic010G280100 Sobic006G152600 Sobic006G152600 Sobic002G226000--Sobic006G152600 Sobic009G180200 Sobic009G180200 Sobic002G226000--Sobic009G180200 Sobic002G367700--Sobic006G241350 Sobic002G367700--Sobic003G123300 Sobic002G367700--Sobic001G078900 Sobic006G051100 Sobic006G051100 Sobic002G367700--Sobic006G051100 Sobic002G367700--Sobic001G465100 Sobic002G367700--Sobic004G325900 Sobic002G016300 Sobic002G016300 Sobic002G367700--Sobic002G016300 Sobic002G367700--Sobic007G028700 Sobic002G367700--Sobic006G241400 Sobic003G013600 Sobic003G013600 Sobic003G123300--Sobic003G013600 Sobic003G123300--Sobic001G465100 Sobic003G123300--Sobic006G051100 Sobic001G225600 Sobic001G225600 Sobic003G123300--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic003G123300--Sobic002G421600 Sobic003G123300--Sobic006G241350 Sobic003G123300--Sobic002G367700 Sobic001G530350 Sobic001G530350 Sobic003G123300--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G123300--Sobic010G267000 Sobic008G015300 Sobic008G015300 Sobic003G178700--Sobic008G015300 Sobic003G163500 Sobic003G163500 Sobic003G178700--Sobic003G163500 Sobic005G046500 Sobic005G046500 Sobic003G178700--Sobic005G046500 Sobic009G002500 Sobic009G002500 Sobic003G178700--Sobic009G002500 Sobic008G101500 Sobic008G101500 Sobic003G178700--Sobic008G101500 Sobic008G118000 Sobic008G118000 Sobic003G178700--Sobic008G118000 Sobic005G076000 Sobic005G076000 Sobic003G178700--Sobic005G076000 Sobic007G129100 Sobic007G129100 Sobic003G178700--Sobic007G129100 Sobic009G213400 Sobic009G213400 Sobic003G178700--Sobic009G213400 Sobic003G147401--Sobic009G180200 Sobic003G147401--Sobic002G226000 Sobic003G147401--Sobic004G325900 Sobic004G221900 Sobic004G221900 Sobic003G147401--Sobic004G221900 Sobic005G085600 Sobic005G085600 Sobic003G147401--Sobic005G085600 Sobic003G147401--Sobic001G032100 Sobic003G147401--Sobic009G198900 Sobic003G147401--Sobic001G078900 Sobic001G363100 Sobic001G363100 Sobic003G147401--Sobic001G363100 Sobic005G036700 Sobic005G036700 Sobic002G380400--Sobic005G036700 Sobic002G380400--Sobic001G078900 Sobic010G245100 Sobic010G245100 Sobic002G380400--Sobic010G245100 Sobic002G380400--Sobic009G213400 Sobic002G103500 Sobic002G103500 Sobic002G380400--Sobic002G103500 Sobic003G320600 Sobic003G320600 Sobic002G380400--Sobic003G320600 Sobic002G380400--Sobic003G178700 Sobic003G222300 Sobic003G222300 Sobic002G380400--Sobic003G222300 Sobic002G380400--Sobic001G465100
Octagon: transcription factors


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