Gene annotation
Transcriptome id Sobic.010G245100.1
Synonym
Functional annotation lectin-like receptor kinase 1, putative, expressed
UniProt A0A1W0VUL0
Pfam PF00069 PF00139
Panther DB PTHR27007 PTHR27007:SF19
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT5G10530 : Concanavalin A-like lectin protein kinase family protein
RAP-DB (Rice) LOC_Os08g03240.1 : lectin-like receptor kinase 1, putative, expressed
MaizeGDB (Corn) Zm00025a051221 , Zm00025a050089 , Zm00025a004650
Brachypodium -
Barley HORVU3Hr1G059850.1 , HORVU3Hr1G059850.2 , HORVU3Hr1G059850.3 , HORVU4Hr1G016880.1 , HORVU4Hr1G016880.3 , HORVU4Hr1G016880.2 , HORVU4Hr1G016880.5 , HORVU4Hr1G016880.4 , HORVU4Hr1G016880.6 , HORVU5Hr1G000940.2 , HORVU5Hr1G000940.1 , HORVU4Hr1G081590.8 , HORVU4Hr1G081590.7 , HORVU4Hr1G081590.6 , HORVU4Hr1G081590.4 , HORVU4Hr1G081590.3 , HORVU4Hr1G081590.2 , HORVU4Hr1G081590.1
Wheat TraesCS6A02G058500 , TraesCS4D02G102700 , TraesCSU02G142100 , TraesCSU02G142100 , TraesCS4B02G106000 , TraesCS5D02G270900 , TraesCS5D02G270900 , TraesCS4A02G201800 , TraesCS5B02G262200 , TraesCS4A02G466600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
2 Sobic.006G273000 AT hook motif domain containing protein, expressed -
3 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.003G284300 expressed protein -
5 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
6 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
7 Sobic.010G052500 ZOS6-01 - C2H2 zinc finger protein, expressed -
8 Sobic.005G055900 expressed protein -
9 Sobic.001G093600 - -
10 Sobic.001G115400 STE_MEK_ste7_MAP2K.7 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K04368: MAP2K1, mitogen-activated protein kinase kinase 1
11 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
12 Sobic.006G053700 ACT domain containing protein, expressed -
13 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
14 Sobic.003G408400 PCF-like (ClassI) Subclade 3 TCP(PubMedID : 21444336)@"TCP is actually a family of transcription factors named after: teosinte branched 1 (tb1, Zea mays (Maize)), cycloidea (cyc) (Antirrhinum majus) (Garden snapdragon) and PCF in rice (Oryza sativa)."(PubMedID : 27917941)@"plant-specific TCP family of transcription factors, in particular, have been shown to play key roles in evolution of plant form and structure (putative)"(PubMedID : 28383054)@TCP family transcription factor, putative, expressed -
15 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
16 Sobic.005G203900 OsGrx_C17 - glutaredoxin subgroup III, expressed K03676: grxC, GLRX, glutaredoxin 3
17 Sobic.003G088800 multi-copper oxidase type I family protein, putative, expressed -
18 Sobic.001G321600 dehydration response related protein, putative, expressed -
19 Sobic.010G248301 - K00499: choline monooxygenase
20 Sobic.001G019300 WD40-like Beta Propeller Repeat family protein, expressed -


Gene co-expression network
sample Sobic010G245100 Sobic010G245100 Sobic009G213400 Sobic009G213400 Sobic010G245100--Sobic009G213400 Sobic006G273000 Sobic006G273000 Sobic010G245100--Sobic006G273000 Sobic003G222300 Sobic003G222300 Sobic010G245100--Sobic003G222300 Sobic003G284300 Sobic003G284300 Sobic010G245100--Sobic003G284300 Sobic001G275200 Sobic001G275200 Sobic010G245100--Sobic001G275200 Sobic001G005500 Sobic001G005500 Sobic010G245100--Sobic001G005500 Sobic010G052500 Sobic010G052500 Sobic010G245100--Sobic010G052500 Sobic005G055900 Sobic005G055900 Sobic010G245100--Sobic005G055900 Sobic001G093600 Sobic001G093600 Sobic010G245100--Sobic001G093600 Sobic009G213400--Sobic010G245100 Sobic001G377000 Sobic001G377000 Sobic009G213400--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic009G213400--Sobic004G096300 Sobic009G213400--Sobic006G273000 Sobic009G213400--Sobic003G222300 Sobic001G191200 Sobic001G191200 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic009G213400--Sobic001G093600 Sobic009G213400--Sobic010G052500 Sobic006G273000--Sobic001G275200 Sobic006G273000--Sobic001G093600 Sobic006G273000--Sobic010G245100 Sobic006G273000--Sobic003G284300 Sobic006G273000--Sobic001G005500 Sobic006G273000--Sobic009G213400 Sobic010G246600 Sobic010G246600 Sobic006G273000--Sobic010G246600 Sobic006G273000--Sobic010G052500 Sobic007G179750 Sobic007G179750 Sobic006G273000--Sobic007G179750 Sobic010G258300 Sobic010G258300 Sobic003G222300--Sobic010G258300 Sobic003G222300--Sobic010G245100 Sobic003G222300--Sobic010G052500 Sobic003G222300--Sobic009G213400 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic009G154600 Sobic009G154600 Sobic003G222300--Sobic009G154600 Sobic001G031300 Sobic001G031300 Sobic003G222300--Sobic001G031300 Sobic003G107300 Sobic003G107300 Sobic003G222300--Sobic003G107300 Sobic009G038200 Sobic009G038200 Sobic003G284300--Sobic009G038200 Sobic003G284300--Sobic006G273000 Sobic003G284300--Sobic001G005500 Sobic001G321600 Sobic001G321600 Sobic003G284300--Sobic001G321600 Sobic003G284300--Sobic001G093600 Sobic001G019300 Sobic001G019300 Sobic003G284300--Sobic001G019300 Sobic006G197800 Sobic006G197800 Sobic003G284300--Sobic006G197800 Sobic005G063900 Sobic005G063900 Sobic003G284300--Sobic005G063900 Sobic007G014600 Sobic007G014600 Sobic003G284300--Sobic007G014600 Sobic001G275200--Sobic006G273000 Sobic003G088800 Sobic003G088800 Sobic001G275200--Sobic003G088800 Sobic001G275200--Sobic001G093600 Sobic001G310800 Sobic001G310800 Sobic001G275200--Sobic001G310800 Sobic001G275200--Sobic001G005500 Sobic005G203900 Sobic005G203900 Sobic001G275200--Sobic005G203900 Sobic001G275200--Sobic001G019300 Sobic001G435500 Sobic001G435500 Sobic001G275200--Sobic001G435500 Sobic001G275200--Sobic005G055900 Sobic001G005500--Sobic001G321600 Sobic002G195700 Sobic002G195700 Sobic001G005500--Sobic002G195700 Sobic001G005500--Sobic001G019300 Sobic001G005500--Sobic001G093600 Sobic002G366100 Sobic002G366100 Sobic001G005500--Sobic002G366100 Sobic008G073400 Sobic008G073400 Sobic001G005500--Sobic008G073400 Sobic006G269400 Sobic006G269400 Sobic001G005500--Sobic006G269400 Sobic001G005500--Sobic006G273000 Sobic007G191900 Sobic007G191900 Sobic001G005500--Sobic007G191900 Sobic010G052500--Sobic003G222300 Sobic003G114100 Sobic003G114100 Sobic010G052500--Sobic003G114100 Sobic010G052500--Sobic006G273000 Sobic010G052500--Sobic009G213400 Sobic010G052500--Sobic001G005500 Sobic010G052500--Sobic010G246600 Sobic010G052500--Sobic001G275200 Sobic010G052500--Sobic007G191900 Sobic010G052500--Sobic010G245100 Sobic005G055900--Sobic001G435500 Sobic005G055900--Sobic003G088800 Sobic002G337001 Sobic002G337001 Sobic005G055900--Sobic002G337001 Sobic003G163700 Sobic003G163700 Sobic005G055900--Sobic003G163700 Sobic005G055900--Sobic001G275200 Sobic004G144700 Sobic004G144700 Sobic005G055900--Sobic004G144700 Sobic010G128000 Sobic010G128000 Sobic005G055900--Sobic010G128000 Sobic005G055900--Sobic005G203900 Sobic006G135100 Sobic006G135100 Sobic005G055900--Sobic006G135100 Sobic001G093600--Sobic003G107300 Sobic001G093600--Sobic006G273000 Sobic001G093600--Sobic001G005500 Sobic001G093600--Sobic001G275200 Sobic003G255100 Sobic003G255100 Sobic001G093600--Sobic003G255100 Sobic001G093600--Sobic007G179750 Sobic001G093600--Sobic003G284300 Sobic001G093600--Sobic007G191900 Sobic001G093600--Sobic001G321600
Octagon: transcription factors


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