Gene annotation
Transcriptome id Sobic.001G115400.1
Synonym Sb01g010180, ATMKK9, MKK9
Functional annotation STE_MEK_ste7_MAP2K.7 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
UniProt A0A1Z5S5B7
Pfam PF07714
Panther DB PTHR24361 PTHR24361:SF377
NCBI CDD KOG0581; Mitogen-activated protein kinase kinase (MAP2K)
KEGG Orthology K04368; MAP2K1, mitogen-activated protein kinase kinase 1
Gene Ontology GO:0006468; protein phosphorylation GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT1G18350 : MAP kinase kinase 7
RAP-DB (Rice) LOC_Os03g50550.1 : STE_MEK_ste7_MAP2K.7 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
MaizeGDB (Corn) Zm00025a016954 , Zm00025a016953 , Zm00025a007878
Brachypodium KQK13637
Barley HORVU4Hr1G007920.1 , HORVU4Hr1G007950.1 , HORVU4Hr1G007990.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G245100 lectin-like receptor kinase 1, putative, expressed -
2 Sobic.009G213400 mitochondrial carrier protein, putative, expressed K05863: SLC25A4S, solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31
3 Sobic.003G222300 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
4 Sobic.006G273000 AT hook motif domain containing protein, expressed -
5 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -
6 Sobic.001G275200 oxidoreductase, aldo/keto reductase family protein, putative, expressed -
7 Sobic.010G246600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 16, putative, expressed -
8 Sobic.001G093600 - -
9 Sobic.002G380400 heavy metal-associated domain containing protein, expressed -
10 Sobic.003G107300 light-induced protein 1-like, putative, expressed -
11 Sobic.010G052500 ZOS6-01 - C2H2 zinc finger protein, expressed -
12 Sobic.010G258300 integral membrane protein, putative, expressed -
13 Sobic.003G178700 3-ketoacyl-CoA synthase, putative, expressed K15397: 3-ketoacyl-CoA synthase
14 Sobic.005G055900 expressed protein -
15 Sobic.001G005500 plastid-specific 30S ribosomal protein 1, chloroplast precursor, putative, expressed -
16 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
17 Sobic.006G197800 zinc-binding protein, putative, expressed -
18 Sobic.003G126100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolase, family 31, putative, expressed -
19 Sobic.006G174600 cis-zeatin O-glucosyltransferase, putative, expressed K13495: cis-zeatin O-glucosyltransferase
20 Sobic.006G053700 ACT domain containing protein, expressed -


Gene co-expression network
sample Sobic001G115400 Sobic001G115400 Sobic010G245100 Sobic010G245100 Sobic001G115400--Sobic010G245100 Sobic009G213400 Sobic009G213400 Sobic001G115400--Sobic009G213400 Sobic003G222300 Sobic003G222300 Sobic001G115400--Sobic003G222300 Sobic006G273000 Sobic006G273000 Sobic001G115400--Sobic006G273000 Sobic001G078900 Sobic001G078900 Sobic001G115400--Sobic001G078900 Sobic001G275200 Sobic001G275200 Sobic001G115400--Sobic001G275200 Sobic010G246600 Sobic010G246600 Sobic001G115400--Sobic010G246600 Sobic001G093600 Sobic001G093600 Sobic001G115400--Sobic001G093600 Sobic002G380400 Sobic002G380400 Sobic001G115400--Sobic002G380400 Sobic010G245100--Sobic009G213400 Sobic010G245100--Sobic006G273000 Sobic010G245100--Sobic003G222300 Sobic003G284300 Sobic003G284300 Sobic010G245100--Sobic003G284300 Sobic010G245100--Sobic001G275200 Sobic001G005500 Sobic001G005500 Sobic010G245100--Sobic001G005500 Sobic010G052500 Sobic010G052500 Sobic010G245100--Sobic010G052500 Sobic005G055900 Sobic005G055900 Sobic010G245100--Sobic005G055900 Sobic010G245100--Sobic001G093600 Sobic009G213400--Sobic010G245100 Sobic001G377000 Sobic001G377000 Sobic009G213400--Sobic001G377000 Sobic004G096300 Sobic004G096300 Sobic009G213400--Sobic004G096300 Sobic009G213400--Sobic006G273000 Sobic009G213400--Sobic003G222300 Sobic001G191200 Sobic001G191200 Sobic009G213400--Sobic001G191200 Sobic006G053700 Sobic006G053700 Sobic009G213400--Sobic006G053700 Sobic009G213400--Sobic001G093600 Sobic009G213400--Sobic010G052500 Sobic010G258300 Sobic010G258300 Sobic003G222300--Sobic010G258300 Sobic003G222300--Sobic010G245100 Sobic003G222300--Sobic010G052500 Sobic003G222300--Sobic009G213400 Sobic003G222300--Sobic001G093600 Sobic008G177850 Sobic008G177850 Sobic003G222300--Sobic008G177850 Sobic009G154600 Sobic009G154600 Sobic003G222300--Sobic009G154600 Sobic001G031300 Sobic001G031300 Sobic003G222300--Sobic001G031300 Sobic003G107300 Sobic003G107300 Sobic003G222300--Sobic003G107300 Sobic006G273000--Sobic001G275200 Sobic006G273000--Sobic001G093600 Sobic006G273000--Sobic010G245100 Sobic006G273000--Sobic003G284300 Sobic006G273000--Sobic001G005500 Sobic006G273000--Sobic009G213400 Sobic006G273000--Sobic010G246600 Sobic006G273000--Sobic010G052500 Sobic007G179750 Sobic007G179750 Sobic006G273000--Sobic007G179750 Sobic004G325900 Sobic004G325900 Sobic001G078900--Sobic004G325900 Sobic001G465100 Sobic001G465100 Sobic001G078900--Sobic001G465100 Sobic006G241350 Sobic006G241350 Sobic001G078900--Sobic006G241350 Sobic002G226000 Sobic002G226000 Sobic001G078900--Sobic002G226000 Sobic002G367700 Sobic002G367700 Sobic001G078900--Sobic002G367700 Sobic003G123300 Sobic003G123300 Sobic001G078900--Sobic003G123300 Sobic003G178700 Sobic003G178700 Sobic001G078900--Sobic003G178700 Sobic003G147401 Sobic003G147401 Sobic001G078900--Sobic003G147401 Sobic001G078900--Sobic002G380400 Sobic001G275200--Sobic006G273000 Sobic003G088800 Sobic003G088800 Sobic001G275200--Sobic003G088800 Sobic001G275200--Sobic001G093600 Sobic001G310800 Sobic001G310800 Sobic001G275200--Sobic001G310800 Sobic001G275200--Sobic001G005500 Sobic005G203900 Sobic005G203900 Sobic001G275200--Sobic005G203900 Sobic001G019300 Sobic001G019300 Sobic001G275200--Sobic001G019300 Sobic001G435500 Sobic001G435500 Sobic001G275200--Sobic001G435500 Sobic001G275200--Sobic005G055900 Sobic010G246600--Sobic006G273000 Sobic010G246600--Sobic001G093600 Sobic001G452700 Sobic001G452700 Sobic010G246600--Sobic001G452700 Sobic010G246600--Sobic001G275200 Sobic010G246600--Sobic010G052500 Sobic001G217700 Sobic001G217700 Sobic010G246600--Sobic001G217700 Sobic010G246600--Sobic007G179750 Sobic010G246600--Sobic003G284300 Sobic010G246600--Sobic004G096300 Sobic001G093600--Sobic003G107300 Sobic001G093600--Sobic006G273000 Sobic001G093600--Sobic001G005500 Sobic001G093600--Sobic001G275200 Sobic003G255100 Sobic003G255100 Sobic001G093600--Sobic003G255100 Sobic001G093600--Sobic007G179750 Sobic001G093600--Sobic003G284300 Sobic007G191900 Sobic007G191900 Sobic001G093600--Sobic007G191900 Sobic001G321600 Sobic001G321600 Sobic001G093600--Sobic001G321600 Sobic005G036700 Sobic005G036700 Sobic002G380400--Sobic005G036700 Sobic002G380400--Sobic001G078900 Sobic002G380400--Sobic010G245100 Sobic002G380400--Sobic009G213400 Sobic002G103500 Sobic002G103500 Sobic002G380400--Sobic002G103500 Sobic003G320600 Sobic003G320600 Sobic002G380400--Sobic003G320600 Sobic002G380400--Sobic003G178700 Sobic002G380400--Sobic003G222300 Sobic002G380400--Sobic001G465100
Octagon: transcription factors


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