Gene annotation
Transcriptome id Sobic.004G325900.1
Synonym Sb04g035560, ATTPS11, ATTPSB, TPS11
Functional annotation trehalose-6-phosphate synthase, putative, expressed
UniProt C5XUC4
Pfam PF02358 PF00982
Panther DB PTHR10788 PTHR10788:SF46
NCBI CDD -
KEGG Orthology K16055; trehalose 6-phosphate synthase/phosphatase
Gene Ontology GO:0005992; trehalose biosynthetic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT2G18700 : trehalose phosphatase/synthase 11
RAP-DB (Rice) LOC_Os02g54820.2 : trehalose-6-phosphate synthase, putative, expressed
MaizeGDB (Corn) Zm00025a015652 , Zm00025a013837 , Zm00025a032969 , Zm00025a022421 , Zm00025a005826
Brachypodium KQK01089 , KQK01091 , KQK01090
Barley HORVU0Hr1G028350.1 , HORVU6Hr1G084190.4 , HORVU6Hr1G084190.2 , HORVU6Hr1G084190.3 , HORVU6Hr1G084190.1
Wheat TraesCS6A02G351300 , TraesCS6D02G334000 , TraesCS6D02G334000 , TraesCS6B02G384500
Populus -


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cDNA sequences
Sobic.004G325900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -
2 Sobic.007G154701 - -
3 Sobic.006G241350 - -
4 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
5 Sobic.003G147401 - -
6 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
7 Sobic.006G241600 expressed protein -
8 Sobic.003G379700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Increased expression in phyB-1 mutant(PubMedID : 26893475)@No apical meristem protein, putative, expressed -
9 Sobic.001G032100 BBTI13 - Bowman-Birk type bran trypsin inhibitor precursor, expressed -
10 Sobic.002G367700 peptide transporter PTR2, putative, expressed K14638: SLC15A3_4, solute carrier family 15 (peptide/histidine transporter), member 3/4
11 Sobic.006G152600 - -
12 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
13 Sobic.007G028700 LSD1 zinc finger domain containing protein, expressed -
14 Sobic.010G067700 expressed protein -
15 Sobic.004G221900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF584 domain containing protein, putative, expressed -
16 Sobic.001G247400 plant-specific domain TIGR01615 family protein, expressed -
17 Sobic.002G421600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@thioredoxin, putative, expressed -
18 Sobic.002G355500 C2 domain containing protein, putative, expressed -
19 Sobic.001G225100 expressed protein -
20 Sobic.009G022000 white-brown complex homolog protein 16, putative, expressed -


Gene co-expression network
sample Sobic004G325900 Sobic004G325900 Sobic001G078900 Sobic001G078900 Sobic004G325900--Sobic001G078900 Sobic007G154701 Sobic007G154701 Sobic004G325900--Sobic007G154701 Sobic006G241350 Sobic006G241350 Sobic004G325900--Sobic006G241350 Sobic001G465100 Sobic001G465100 Sobic004G325900--Sobic001G465100 Sobic003G147401 Sobic003G147401 Sobic004G325900--Sobic003G147401 Sobic003G123300 Sobic003G123300 Sobic004G325900--Sobic003G123300 Sobic006G241600 Sobic006G241600 Sobic004G325900--Sobic006G241600 Sobic003G379700 Sobic003G379700 Sobic004G325900--Sobic003G379700 Sobic001G032100 Sobic001G032100 Sobic004G325900--Sobic001G032100 Sobic001G078900--Sobic004G325900 Sobic001G078900--Sobic001G465100 Sobic001G078900--Sobic006G241350 Sobic002G226000 Sobic002G226000 Sobic001G078900--Sobic002G226000 Sobic002G367700 Sobic002G367700 Sobic001G078900--Sobic002G367700 Sobic001G078900--Sobic003G123300 Sobic003G178700 Sobic003G178700 Sobic001G078900--Sobic003G178700 Sobic001G078900--Sobic003G147401 Sobic002G380400 Sobic002G380400 Sobic001G078900--Sobic002G380400 Sobic007G154701--Sobic004G325900 Sobic009G022000 Sobic009G022000 Sobic007G154701--Sobic009G022000 Sobic007G002200 Sobic007G002200 Sobic007G154701--Sobic007G002200 Sobic001G225100 Sobic001G225100 Sobic007G154701--Sobic001G225100 Sobic008G094700 Sobic008G094700 Sobic007G154701--Sobic008G094700 Sobic004G153600 Sobic004G153600 Sobic007G154701--Sobic004G153600 Sobic001G076000 Sobic001G076000 Sobic007G154701--Sobic001G076000 Sobic001G247400 Sobic001G247400 Sobic007G154701--Sobic001G247400 Sobic009G183500 Sobic009G183500 Sobic007G154701--Sobic009G183500 Sobic006G241400 Sobic006G241400 Sobic006G241350--Sobic006G241400 Sobic004G279700 Sobic004G279700 Sobic006G241350--Sobic004G279700 Sobic006G241350--Sobic004G325900 Sobic006G241350--Sobic006G241600 Sobic007G028700 Sobic007G028700 Sobic006G241350--Sobic007G028700 Sobic006G241350--Sobic002G367700 Sobic006G241350--Sobic001G078900 Sobic006G241350--Sobic003G123300 Sobic006G241350--Sobic001G465100 Sobic008G042500 Sobic008G042500 Sobic001G465100--Sobic008G042500 Sobic003G391100 Sobic003G391100 Sobic001G465100--Sobic003G391100 Sobic001G465100--Sobic003G123300 Sobic001G465100--Sobic001G078900 Sobic001G465100--Sobic004G325900 Sobic002G376700 Sobic002G376700 Sobic001G465100--Sobic002G376700 Sobic001G465100--Sobic006G241350 Sobic004G096300 Sobic004G096300 Sobic001G465100--Sobic004G096300 Sobic001G053900 Sobic001G053900 Sobic001G465100--Sobic001G053900 Sobic009G180200 Sobic009G180200 Sobic003G147401--Sobic009G180200 Sobic003G147401--Sobic002G226000 Sobic003G147401--Sobic004G325900 Sobic004G221900 Sobic004G221900 Sobic003G147401--Sobic004G221900 Sobic005G085600 Sobic005G085600 Sobic003G147401--Sobic005G085600 Sobic003G147401--Sobic001G032100 Sobic009G198900 Sobic009G198900 Sobic003G147401--Sobic009G198900 Sobic003G147401--Sobic001G078900 Sobic001G363100 Sobic001G363100 Sobic003G147401--Sobic001G363100 Sobic003G013600 Sobic003G013600 Sobic003G123300--Sobic003G013600 Sobic003G123300--Sobic001G465100 Sobic006G051100 Sobic006G051100 Sobic003G123300--Sobic006G051100 Sobic001G225600 Sobic001G225600 Sobic003G123300--Sobic001G225600 Sobic002G421600 Sobic002G421600 Sobic003G123300--Sobic002G421600 Sobic003G123300--Sobic006G241350 Sobic003G123300--Sobic002G367700 Sobic001G530350 Sobic001G530350 Sobic003G123300--Sobic001G530350 Sobic010G267000 Sobic010G267000 Sobic003G123300--Sobic010G267000 Sobic006G241600--Sobic006G241400 Sobic006G241600--Sobic006G241350 Sobic007G126100 Sobic007G126100 Sobic006G241600--Sobic007G126100 Sobic006G241600--Sobic002G421600 Sobic003G000800 Sobic003G000800 Sobic006G241600--Sobic003G000800 Sobic006G241600--Sobic001G247400 Sobic006G241600--Sobic001G032100 Sobic001G149700 Sobic001G149700 Sobic006G241600--Sobic001G149700 Sobic006G241600--Sobic001G225100 Sobic003G379700--Sobic001G076000 Sobic003G396000 Sobic003G396000 Sobic003G379700--Sobic003G396000 Sobic003G379700--Sobic008G094700 Sobic005G105000 Sobic005G105000 Sobic003G379700--Sobic005G105000 Sobic006G218700 Sobic006G218700 Sobic003G379700--Sobic006G218700 Sobic001G478300 Sobic001G478300 Sobic003G379700--Sobic001G478300 Sobic004G320000 Sobic004G320000 Sobic003G379700--Sobic004G320000 Sobic003G044200 Sobic003G044200 Sobic003G379700--Sobic003G044200 Sobic009G011700 Sobic009G011700 Sobic003G379700--Sobic009G011700 Sobic003G296600 Sobic003G296600 Sobic001G032100--Sobic003G296600 Sobic001G032100--Sobic005G085600 Sobic001G032100--Sobic001G247400 Sobic006G194150 Sobic006G194150 Sobic001G032100--Sobic006G194150 Sobic001G032100--Sobic004G221900 Sobic003G034500 Sobic003G034500 Sobic001G032100--Sobic003G034500 Sobic003G293900 Sobic003G293900 Sobic001G032100--Sobic003G293900 Sobic001G032100--Sobic001G225100 Sobic001G032100--Sobic009G183500
Octagon: transcription factors


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