Gene annotation
Transcriptome id Sobic.002G355500.8,Sobic.002G355500.5,Sobic.002G355500.6,Sobic.002G355500.7
Synonym Sb02g037710
Functional annotation C2 domain containing protein, putative, expressed
UniProt A0A1B6QF95
Pfam PF00168
Panther DB PTHR31208 PTHR31208:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT5G55530 : Calcium-dependent lipid-binding (CaLB domain) family protein
RAP-DB (Rice) LOC_Os07g39620.2,LOC_Os07g39620.1 : C2 domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a048542 , Zm00025a015037
Brachypodium PNT74859 , KQK15495
Barley HORVU2Hr1G036050.4 , HORVU2Hr1G036050.1 , HORVU2Hr1G036050.8 , HORVU2Hr1G036050.6 , HORVU2Hr1G036050.7 , HORVU2Hr1G036050.5 , HORVU2Hr1G036050.2 , HORVU2Hr1G036050.3 , HORVU2Hr1G033620.1
Wheat -
Populus -


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cDNA sequences
Sobic.002G355500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G119000 OsFBK6 - F-box domain and kelch repeat containing protein, expressed -
2 Sobic.006G109300 protein binding protein, putative, expressed -
3 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
4 Sobic.009G183500 expressed protein -
5 Sobic.004G188300 regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS2-11 - C2H2 zinc finger protein, expressed -
6 Sobic.001G216600 zinc finger, C3HC4 type domain containing protein, expressed -
7 Sobic.010G000700 zinc finger, C3HC4 type domain containing protein, expressed K11982: E3 ubiquitin-protein ligase RNF115/126
8 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
9 Sobic.005G046100 bZIP transcription factor domain containing protein, expressed -
10 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
11 Sobic.010G280100 expressed protein -
12 Sobic.006G134100 carbonyl reductase 3, putative, expressed -
13 Sobic.010G043000 OsFBL27 - F-box domain and LRR containing protein, expressed -
14 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
15 Sobic.001G149700 vesicle transport v-SNARE protein, putative, expressed K08496: GOSR2, golgi SNAP receptor complex member 2
16 Sobic.004G325900 trehalose-6-phosphate synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
17 Sobic.008G142700 expressed protein -
18 Sobic.007G195400 FHA domain containing protein, putative, expressed -
19 Sobic.003G093600 methyltransferase, putative, expressed -
20 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11


Gene co-expression network
sample Sobic002G355500 Sobic002G355500 Sobic004G119000 Sobic004G119000 Sobic002G355500--Sobic004G119000 Sobic006G109300 Sobic006G109300 Sobic002G355500--Sobic006G109300 Sobic004G150400 Sobic004G150400 Sobic002G355500--Sobic004G150400 Sobic009G183500 Sobic009G183500 Sobic002G355500--Sobic009G183500 Sobic004G188300 Sobic004G188300 Sobic002G355500--Sobic004G188300 Sobic001G216600 Sobic001G216600 Sobic002G355500--Sobic001G216600 Sobic010G000700 Sobic010G000700 Sobic002G355500--Sobic010G000700 Sobic001G076000 Sobic001G076000 Sobic002G355500--Sobic001G076000 Sobic005G046100 Sobic005G046100 Sobic002G355500--Sobic005G046100 Sobic004G119000--Sobic004G150400 Sobic010G280100 Sobic010G280100 Sobic004G119000--Sobic010G280100 Sobic001G291100 Sobic001G291100 Sobic004G119000--Sobic001G291100 Sobic003G185200 Sobic003G185200 Sobic004G119000--Sobic003G185200 Sobic002G272800 Sobic002G272800 Sobic004G119000--Sobic002G272800 Sobic009G087800 Sobic009G087800 Sobic004G119000--Sobic009G087800 Sobic010G268300 Sobic010G268300 Sobic004G119000--Sobic010G268300 Sobic002G365100 Sobic002G365100 Sobic004G119000--Sobic002G365100 Sobic007G205800 Sobic007G205800 Sobic004G119000--Sobic007G205800 Sobic010G055500 Sobic010G055500 Sobic006G109300--Sobic010G055500 Sobic010G071200 Sobic010G071200 Sobic006G109300--Sobic010G071200 Sobic006G109300--Sobic004G150400 Sobic010G033400 Sobic010G033400 Sobic006G109300--Sobic010G033400 Sobic006G109300--Sobic002G365100 Sobic008G142700 Sobic008G142700 Sobic006G109300--Sobic008G142700 Sobic001G131800 Sobic001G131800 Sobic006G109300--Sobic001G131800 Sobic007G063200 Sobic007G063200 Sobic006G109300--Sobic007G063200 Sobic006G109300--Sobic002G272800 Sobic004G150400--Sobic004G119000 Sobic004G150400--Sobic010G055500 Sobic004G150400--Sobic007G205800 Sobic004G150400--Sobic002G272800 Sobic004G150400--Sobic010G071200 Sobic001G028400 Sobic001G028400 Sobic004G150400--Sobic001G028400 Sobic006G088100 Sobic006G088100 Sobic004G150400--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic004G150400--Sobic003G093600 Sobic004G150400--Sobic006G109300 Sobic007G023700 Sobic007G023700 Sobic009G183500--Sobic007G023700 Sobic009G183500--Sobic003G093600 Sobic002G221900 Sobic002G221900 Sobic009G183500--Sobic002G221900 Sobic009G183500--Sobic004G188300 Sobic002G039500 Sobic002G039500 Sobic009G183500--Sobic002G039500 Sobic003G034500 Sobic003G034500 Sobic009G183500--Sobic003G034500 Sobic008G126200 Sobic008G126200 Sobic009G183500--Sobic008G126200 Sobic004G143700 Sobic004G143700 Sobic009G183500--Sobic004G143700 Sobic006G257900 Sobic006G257900 Sobic009G183500--Sobic006G257900 Sobic003G026300 Sobic003G026300 Sobic004G188300--Sobic003G026300 Sobic004G188300--Sobic003G093600 Sobic001G222300 Sobic001G222300 Sobic004G188300--Sobic001G222300 Sobic007G150200 Sobic007G150200 Sobic004G188300--Sobic007G150200 Sobic004G188300--Sobic009G183500 Sobic004G188300--Sobic007G023700 Sobic004G188300--Sobic006G257900 Sobic005G167300 Sobic005G167300 Sobic004G188300--Sobic005G167300 Sobic010G218100 Sobic010G218100 Sobic004G188300--Sobic010G218100 Sobic007G195400 Sobic007G195400 Sobic001G216600--Sobic007G195400 Sobic001G309100 Sobic001G309100 Sobic001G216600--Sobic001G309100 Sobic009G164900 Sobic009G164900 Sobic001G216600--Sobic009G164900 Sobic003G437500 Sobic003G437500 Sobic001G216600--Sobic003G437500 Sobic001G216600--Sobic004G119000 Sobic001G216600--Sobic004G150400 Sobic002G334600 Sobic002G334600 Sobic001G216600--Sobic002G334600 Sobic001G216600--Sobic002G272800 Sobic004G349100 Sobic004G349100 Sobic001G216600--Sobic004G349100 Sobic010G269600 Sobic010G269600 Sobic010G000700--Sobic010G269600 Sobic010G000700--Sobic003G185200 Sobic010G000700--Sobic002G365100 Sobic010G000700--Sobic010G055500 Sobic010G000700--Sobic004G150400 Sobic003G248500 Sobic003G248500 Sobic010G000700--Sobic003G248500 Sobic008G034600 Sobic008G034600 Sobic010G000700--Sobic008G034600 Sobic010G000700--Sobic006G109300 Sobic002G061400 Sobic002G061400 Sobic010G000700--Sobic002G061400 Sobic001G149700 Sobic001G149700 Sobic001G076000--Sobic001G149700 Sobic001G478300 Sobic001G478300 Sobic001G076000--Sobic001G478300 Sobic001G076000--Sobic008G142700 Sobic003G379700 Sobic003G379700 Sobic001G076000--Sobic003G379700 Sobic001G427800 Sobic001G427800 Sobic001G076000--Sobic001G427800 Sobic001G441600 Sobic001G441600 Sobic001G076000--Sobic001G441600 Sobic001G076000--Sobic010G071200 Sobic001G076000--Sobic006G257900 Sobic003G116700 Sobic003G116700 Sobic001G076000--Sobic003G116700 Sobic005G046100--Sobic005G167300 Sobic005G046100--Sobic004G150400 Sobic001G420700 Sobic001G420700 Sobic005G046100--Sobic001G420700 Sobic005G046100--Sobic006G109300 Sobic004G198000 Sobic004G198000 Sobic005G046100--Sobic004G198000 Sobic005G046100--Sobic010G055500 Sobic009G137800 Sobic009G137800 Sobic005G046100--Sobic009G137800 Sobic001G290200 Sobic001G290200 Sobic005G046100--Sobic001G290200 Sobic005G046100--Sobic003G026300
Octagon: transcription factors


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