Gene annotation
Transcriptome id Sobic.008G042500.1
Synonym Sb08g003650
Functional annotation expressed protein
UniProt C5YS63
Pfam -
Panther DB PTHR34569 PTHR34569:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os12g06190.1 : expressed protein
MaizeGDB (Corn) Zm00025a033536
Brachypodium PNT68066 , KQJ98204 , PNT68064 , PNT68065 , PNT68063 , KQJ98203 , PNT68067 , KQJ98205 , KQJ92172
Barley -
Wheat -
Populus -


JBrowse

Open New Page


cDNA sequences
Sobic.008G042500


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.004G096300 protein phosphatase 2C, putative, expressed -
3 Sobic.003G391100 helix-loop-helix DNA-binding domain containing protein, expressed -
4 Sobic.007G152101 - K11982: E3 ubiquitin-protein ligase RNF115/126
5 Sobic.010G280100 expressed protein -
6 Sobic.006G172900 scarecrow, putative, expressed -
7 Sobic.001G240800 tyrosine protein kinase domain containing protein, putative, expressed -
8 Sobic.001G053900 nodulin, putative, expressed -
9 Sobic.003G308700 BTBA2 - Bric-a-Brac,Tramtrack, Broad Complex BTB domain with Ankyrin repeat region, expressed K14508: regulatory protein NPR1
10 Sobic.009G147000 potassium channel AKT1, putative, expressed -
11 Sobic.007G054100 stress-induced protein, putative, expressed -
12 Sobic.004G275200 zinc-binding protein, putative, expressed -
13 Sobic.009G137800 expressed protein -
14 Sobic.003G264901 - -
15 Sobic.003G309900 OsFBX26 - F-box domain containing protein, expressed -
16 Sobic.007G130100 armadillo/beta-catenin repeat family protein, putative, expressed -
17 Sobic.003G123300 zinc finger, C3HC4 type domain containing protein, expressed K16282: E3 ubiquitin-protein ligase RHA2
18 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
19 Sobic.001G293800 chloroplast beta-amylase(PubMedID : 26465154)@chloroplast beta-amylase(PubMedID : 26465154)@beta-amylase, putative, expressed K01177: beta-amylase
20 Sobic.001G078900 MYB(PubMedID : 28944535)@MYB family transcription factor, putative, expressed -


Gene co-expression network
sample Sobic008G042500 Sobic008G042500 Sobic001G465100 Sobic001G465100 Sobic008G042500--Sobic001G465100 Sobic004G096300 Sobic004G096300 Sobic008G042500--Sobic004G096300 Sobic003G391100 Sobic003G391100 Sobic008G042500--Sobic003G391100 Sobic007G152101 Sobic007G152101 Sobic008G042500--Sobic007G152101 Sobic010G280100 Sobic010G280100 Sobic008G042500--Sobic010G280100 Sobic006G172900 Sobic006G172900 Sobic008G042500--Sobic006G172900 Sobic001G240800 Sobic001G240800 Sobic008G042500--Sobic001G240800 Sobic001G053900 Sobic001G053900 Sobic008G042500--Sobic001G053900 Sobic003G308700 Sobic003G308700 Sobic008G042500--Sobic003G308700 Sobic001G465100--Sobic008G042500 Sobic001G465100--Sobic003G391100 Sobic003G123300 Sobic003G123300 Sobic001G465100--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic001G465100--Sobic001G078900 Sobic004G325900 Sobic004G325900 Sobic001G465100--Sobic004G325900 Sobic002G376700 Sobic002G376700 Sobic001G465100--Sobic002G376700 Sobic006G241350 Sobic006G241350 Sobic001G465100--Sobic006G241350 Sobic001G465100--Sobic004G096300 Sobic001G465100--Sobic001G053900 Sobic010G172200 Sobic010G172200 Sobic004G096300--Sobic010G172200 Sobic001G293800 Sobic001G293800 Sobic004G096300--Sobic001G293800 Sobic001G377000 Sobic001G377000 Sobic004G096300--Sobic001G377000 Sobic009G213400 Sobic009G213400 Sobic004G096300--Sobic009G213400 Sobic003G264901 Sobic003G264901 Sobic004G096300--Sobic003G264901 Sobic006G053700 Sobic006G053700 Sobic004G096300--Sobic006G053700 Sobic004G096300--Sobic001G053900 Sobic007G014600 Sobic007G014600 Sobic004G096300--Sobic007G014600 Sobic008G152200 Sobic008G152200 Sobic004G096300--Sobic008G152200 Sobic003G391100--Sobic001G465100 Sobic006G197800 Sobic006G197800 Sobic003G391100--Sobic006G197800 Sobic003G391100--Sobic008G042500 Sobic003G284300 Sobic003G284300 Sobic003G391100--Sobic003G284300 Sobic003G391100--Sobic001G053900 Sobic003G391100--Sobic003G123300 Sobic003G391100--Sobic004G096300 Sobic010G214000 Sobic010G214000 Sobic003G391100--Sobic010G214000 Sobic010G245100 Sobic010G245100 Sobic003G391100--Sobic010G245100 Sobic007G152101--Sobic006G172900 Sobic009G232700 Sobic009G232700 Sobic007G152101--Sobic009G232700 Sobic003G361500 Sobic003G361500 Sobic007G152101--Sobic003G361500 Sobic006G109300 Sobic006G109300 Sobic007G152101--Sobic006G109300 Sobic007G152101--Sobic008G042500 Sobic001G298600 Sobic001G298600 Sobic007G152101--Sobic001G298600 Sobic001G131800 Sobic001G131800 Sobic007G152101--Sobic001G131800 Sobic002G187801 Sobic002G187801 Sobic007G152101--Sobic002G187801 Sobic007G152101--Sobic003G308700 Sobic009G198900 Sobic009G198900 Sobic010G280100--Sobic009G198900 Sobic004G119000 Sobic004G119000 Sobic010G280100--Sobic004G119000 Sobic003G324000 Sobic003G324000 Sobic010G280100--Sobic003G324000 Sobic007G052900 Sobic007G052900 Sobic010G280100--Sobic007G052900 Sobic008G136200 Sobic008G136200 Sobic010G280100--Sobic008G136200 Sobic009G087800 Sobic009G087800 Sobic010G280100--Sobic009G087800 Sobic007G205800 Sobic007G205800 Sobic010G280100--Sobic007G205800 Sobic001G368400 Sobic001G368400 Sobic010G280100--Sobic001G368400 Sobic006G273200 Sobic006G273200 Sobic010G280100--Sobic006G273200 Sobic006G172900--Sobic007G152101 Sobic004G113800 Sobic004G113800 Sobic006G172900--Sobic004G113800 Sobic006G172900--Sobic003G308700 Sobic006G172900--Sobic010G214000 Sobic006G172900--Sobic001G053900 Sobic006G172900--Sobic008G152200 Sobic008G175800 Sobic008G175800 Sobic006G172900--Sobic008G175800 Sobic006G172900--Sobic009G232700 Sobic006G043901 Sobic006G043901 Sobic006G172900--Sobic006G043901 Sobic004G096100 Sobic004G096100 Sobic001G240800--Sobic004G096100 Sobic010G241300 Sobic010G241300 Sobic001G240800--Sobic010G241300 Sobic005G072200 Sobic005G072200 Sobic001G240800--Sobic005G072200 Sobic001G291200 Sobic001G291200 Sobic001G240800--Sobic001G291200 Sobic004G227300 Sobic004G227300 Sobic001G240800--Sobic004G227300 Sobic004G088100 Sobic004G088100 Sobic001G240800--Sobic004G088100 Sobic007G179750 Sobic007G179750 Sobic001G240800--Sobic007G179750 Sobic006G102400 Sobic006G102400 Sobic001G240800--Sobic006G102400 Sobic001G240800--Sobic003G264901 Sobic001G053900--Sobic004G096300 Sobic001G053900--Sobic002G376700 Sobic001G053900--Sobic010G214000 Sobic001G053900--Sobic001G291200 Sobic001G053900--Sobic003G264901 Sobic001G053900--Sobic004G113800 Sobic001G053900--Sobic006G172900 Sobic001G053900--Sobic008G152200 Sobic007G071000 Sobic007G071000 Sobic001G053900--Sobic007G071000 Sobic002G073900 Sobic002G073900 Sobic003G308700--Sobic002G073900 Sobic007G054100 Sobic007G054100 Sobic003G308700--Sobic007G054100 Sobic002G174900 Sobic002G174900 Sobic003G308700--Sobic002G174900 Sobic002G273700 Sobic002G273700 Sobic003G308700--Sobic002G273700 Sobic003G308700--Sobic006G172900 Sobic009G094800 Sobic009G094800 Sobic003G308700--Sobic009G094800 Sobic001G387600 Sobic001G387600 Sobic003G308700--Sobic001G387600 Sobic009G008100 Sobic009G008100 Sobic003G308700--Sobic009G008100 Sobic003G308700--Sobic002G187801
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.