Gene annotation
Transcriptome id Sobic.009G147000.1
Synonym KT2/3, AKT2, AKT2/3, AKT3
Functional annotation potassium channel AKT1, putative, expressed
UniProt A0A1B6P8W6
Pfam PF00520
Panther DB PTHR10217 PTHR10217:SF493
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016020; membrane GO:0006811ion transport GO:0005216ion channel activity


Orthologs (automatic annotation)
TAIR AT4G22200 : potassium transport 2/3
RAP-DB (Rice) LOC_Os01g45990.1 : potassium channel AKT1, putative, expressed
MaizeGDB (Corn) Zm00025a037335 , Zm00025a043762
Brachypodium KQK06109
Barley HORVU1Hr1G065250.8 , HORVU1Hr1G065250.7 , HORVU1Hr1G065250.5 , HORVU1Hr1G065250.4 , HORVU1Hr1G065250.3 , HORVU1Hr1G065250.2 , HORVU1Hr1G065250.1 , HORVU1Hr1G065250.9 , HORVU1Hr1G065250.6 , HORVU1Hr1G065250.11 , HORVU1Hr1G065250.10
Wheat TraesCS1B02G278600 , TraesCS1B02G278600 , TraesCS1B02G278600 , TraesCS1A02G267900 , TraesCS1A02G267900 , TraesCS1D02G267800 , TraesCS1D02G267800 , TraesCS6B02G081300 , TraesCS6B02G081300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G146800 potassium channel AKT2/3, putative, expressed -
2 Sobic.008G042500 expressed protein -
3 Sobic.001G465100 hydrolase, alpha/beta fold family domain containing protein, expressed -
4 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
5 Sobic.001G463100 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.002G281700 eukaryotic aspartyl protease domain containing protein, expressed -
7 Sobic.003G391100 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.001G209101 - -
9 Sobic.001G162100 WRKY94, expressed -
10 Sobic.004G027900 - -
11 Sobic.001G410100 CGMC_MAPKCGMC_2_ERK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K04371: ERK, mitogen-activated protein kinase 1/3
12 Sobic.001G472600 gibberellin response modulator protein, putative, expressed -
13 Sobic.006G160600 histidine triad family protein, putative, expressed -
14 Sobic.005G026100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@hydroxymethylglutaryl-CoA lyase, putative, expressed K01640: E4.1.3.4, HMGCL, hydroxymethylglutaryl-CoA lyase
15 Sobic.007G079700 pentatricopeptide, putative, expressed -
16 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
17 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -
18 Sobic.003G044200 C2 domain containing protein, putative, expressed -
19 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
20 Sobic.003G253800 OsFBT1 - F-box and tubby domain containing protein, expressed -


Gene co-expression network
sample Sobic009G147000 Sobic009G147000 Sobic009G146800 Sobic009G146800 Sobic009G147000--Sobic009G146800 Sobic008G042500 Sobic008G042500 Sobic009G147000--Sobic008G042500 Sobic001G465100 Sobic001G465100 Sobic009G147000--Sobic001G465100 Sobic001G138300 Sobic001G138300 Sobic009G147000--Sobic001G138300 Sobic001G463100 Sobic001G463100 Sobic009G147000--Sobic001G463100 Sobic002G281700 Sobic002G281700 Sobic009G147000--Sobic002G281700 Sobic003G391100 Sobic003G391100 Sobic009G147000--Sobic003G391100 Sobic001G209101 Sobic001G209101 Sobic009G147000--Sobic001G209101 Sobic001G162100 Sobic001G162100 Sobic009G147000--Sobic001G162100 Sobic009G146800--Sobic009G147000 Sobic007G194700 Sobic007G194700 Sobic009G146800--Sobic007G194700 Sobic006G102400 Sobic006G102400 Sobic009G146800--Sobic006G102400 Sobic002G204600 Sobic002G204600 Sobic009G146800--Sobic002G204600 Sobic005G026100 Sobic005G026100 Sobic009G146800--Sobic005G026100 Sobic001G266400 Sobic001G266400 Sobic009G146800--Sobic001G266400 Sobic010G133200 Sobic010G133200 Sobic009G146800--Sobic010G133200 Sobic004G136600 Sobic004G136600 Sobic009G146800--Sobic004G136600 Sobic004G320800 Sobic004G320800 Sobic009G146800--Sobic004G320800 Sobic008G042500--Sobic001G465100 Sobic004G096300 Sobic004G096300 Sobic008G042500--Sobic004G096300 Sobic008G042500--Sobic003G391100 Sobic007G152101 Sobic007G152101 Sobic008G042500--Sobic007G152101 Sobic010G280100 Sobic010G280100 Sobic008G042500--Sobic010G280100 Sobic006G172900 Sobic006G172900 Sobic008G042500--Sobic006G172900 Sobic001G240800 Sobic001G240800 Sobic008G042500--Sobic001G240800 Sobic001G053900 Sobic001G053900 Sobic008G042500--Sobic001G053900 Sobic003G308700 Sobic003G308700 Sobic008G042500--Sobic003G308700 Sobic001G465100--Sobic008G042500 Sobic001G465100--Sobic003G391100 Sobic003G123300 Sobic003G123300 Sobic001G465100--Sobic003G123300 Sobic001G078900 Sobic001G078900 Sobic001G465100--Sobic001G078900 Sobic004G325900 Sobic004G325900 Sobic001G465100--Sobic004G325900 Sobic002G376700 Sobic002G376700 Sobic001G465100--Sobic002G376700 Sobic006G241350 Sobic006G241350 Sobic001G465100--Sobic006G241350 Sobic001G465100--Sobic004G096300 Sobic001G465100--Sobic001G053900 Sobic004G079100 Sobic004G079100 Sobic001G138300--Sobic004G079100 Sobic003G350600 Sobic003G350600 Sobic001G138300--Sobic003G350600 Sobic001G430800 Sobic001G430800 Sobic001G138300--Sobic001G430800 Sobic004G231400 Sobic004G231400 Sobic001G138300--Sobic004G231400 Sobic001G054200 Sobic001G054200 Sobic001G138300--Sobic001G054200 Sobic006G212100 Sobic006G212100 Sobic001G138300--Sobic006G212100 Sobic001G441600 Sobic001G441600 Sobic001G138300--Sobic001G441600 Sobic006G263900 Sobic006G263900 Sobic001G138300--Sobic006G263900 Sobic002G129000 Sobic002G129000 Sobic001G138300--Sobic002G129000 Sobic004G337000 Sobic004G337000 Sobic001G463100--Sobic004G337000 Sobic006G160600 Sobic006G160600 Sobic001G463100--Sobic006G160600 Sobic010G135000 Sobic010G135000 Sobic001G463100--Sobic010G135000 Sobic001G463100--Sobic001G054200 Sobic004G083300 Sobic004G083300 Sobic001G463100--Sobic004G083300 Sobic010G199100 Sobic010G199100 Sobic001G463100--Sobic010G199100 Sobic001G463100--Sobic001G138300 Sobic004G265700 Sobic004G265700 Sobic001G463100--Sobic004G265700 Sobic009G131100 Sobic009G131100 Sobic001G463100--Sobic009G131100 Sobic001G342600 Sobic001G342600 Sobic002G281700--Sobic001G342600 Sobic006G218700 Sobic006G218700 Sobic002G281700--Sobic006G218700 Sobic008G096100 Sobic008G096100 Sobic002G281700--Sobic008G096100 Sobic006G052500 Sobic006G052500 Sobic002G281700--Sobic006G052500 Sobic009G195300 Sobic009G195300 Sobic002G281700--Sobic009G195300 Sobic007G026100 Sobic007G026100 Sobic002G281700--Sobic007G026100 Sobic003G116700 Sobic003G116700 Sobic002G281700--Sobic003G116700 Sobic003G119800 Sobic003G119800 Sobic002G281700--Sobic003G119800 Sobic002G281700--Sobic001G138300 Sobic003G391100--Sobic001G465100 Sobic006G197800 Sobic006G197800 Sobic003G391100--Sobic006G197800 Sobic003G391100--Sobic008G042500 Sobic003G284300 Sobic003G284300 Sobic003G391100--Sobic003G284300 Sobic003G391100--Sobic001G053900 Sobic003G391100--Sobic003G123300 Sobic003G391100--Sobic004G096300 Sobic010G214000 Sobic010G214000 Sobic003G391100--Sobic010G214000 Sobic010G245100 Sobic010G245100 Sobic003G391100--Sobic010G245100 Sobic003G317200 Sobic003G317200 Sobic001G209101--Sobic003G317200 Sobic006G109300 Sobic006G109300 Sobic001G209101--Sobic006G109300 Sobic010G055500 Sobic010G055500 Sobic001G209101--Sobic010G055500 Sobic001G209101--Sobic001G430800 Sobic001G209101--Sobic001G138300 Sobic002G365100 Sobic002G365100 Sobic001G209101--Sobic002G365100 Sobic005G046100 Sobic005G046100 Sobic001G209101--Sobic005G046100 Sobic010G071200 Sobic010G071200 Sobic001G209101--Sobic010G071200 Sobic009G230700 Sobic009G230700 Sobic001G209101--Sobic009G230700 Sobic006G225600 Sobic006G225600 Sobic001G162100--Sobic006G225600 Sobic004G234900 Sobic004G234900 Sobic001G162100--Sobic004G234900 Sobic009G059700 Sobic009G059700 Sobic001G162100--Sobic009G059700 Sobic008G016900 Sobic008G016900 Sobic001G162100--Sobic008G016900 Sobic010G062800 Sobic010G062800 Sobic001G162100--Sobic010G062800 Sobic002G122700 Sobic002G122700 Sobic001G162100--Sobic002G122700 Sobic001G434900 Sobic001G434900 Sobic001G162100--Sobic001G434900 Sobic001G098200 Sobic001G098200 Sobic001G162100--Sobic001G098200 Sobic009G219900 Sobic009G219900 Sobic001G162100--Sobic009G219900
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.