Gene annotation
Transcriptome id Sobic.001G209101.1
Synonym -
Functional annotation -
UniProt A0A1Z5S6M1
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
2 Sobic.006G109300 protein binding protein, putative, expressed -
3 Sobic.010G055500 RNA-binding motif protein, putative, expressed K12872: RBM22, pre-mRNA-splicing factor RBM22/SLT11
4 Sobic.001G430800 GA17271-PA, putative, expressed -
5 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
6 Sobic.002G365100 RNA recognition motif containing protein, putative, expressed -
7 Sobic.005G046100 bZIP transcription factor domain containing protein, expressed -
8 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
9 Sobic.009G230700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
10 Sobic.002G368400 mitochondrial import inner membrane translocase subunit Tim17, putative, expressed K17795: mitochondrial import inner membrane translocase subunit TIM17
11 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
12 Sobic.001G472600 gibberellin response modulator protein, putative, expressed -
13 Sobic.009G137800 expressed protein -
14 Sobic.006G213601 - -
15 Sobic.007G028001 - -
16 Sobic.009G134600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed K14493: gibberellin receptor GID1
17 Sobic.007G026100 Divergent PAP2 family domain containing protein, expressed K09775: uncharacterized protein
18 Sobic.003G248500 WD domain, G-beta repeat domain containing protein, expressed -
19 Sobic.004G231400 OsAPRL3 adenosine 5\'-phosphosulfate reductase-like OsAPRL3, expressed -
20 Sobic.009G147000 potassium channel AKT1, putative, expressed -


Gene co-expression network
sample Sobic001G209101 Sobic001G209101 Sobic003G317200 Sobic003G317200 Sobic001G209101--Sobic003G317200 Sobic006G109300 Sobic006G109300 Sobic001G209101--Sobic006G109300 Sobic010G055500 Sobic010G055500 Sobic001G209101--Sobic010G055500 Sobic001G430800 Sobic001G430800 Sobic001G209101--Sobic001G430800 Sobic001G138300 Sobic001G138300 Sobic001G209101--Sobic001G138300 Sobic002G365100 Sobic002G365100 Sobic001G209101--Sobic002G365100 Sobic005G046100 Sobic005G046100 Sobic001G209101--Sobic005G046100 Sobic010G071200 Sobic010G071200 Sobic001G209101--Sobic010G071200 Sobic009G230700 Sobic009G230700 Sobic001G209101--Sobic009G230700 Sobic003G317200--Sobic010G055500 Sobic003G317200--Sobic010G071200 Sobic003G317200--Sobic006G109300 Sobic008G142700 Sobic008G142700 Sobic003G317200--Sobic008G142700 Sobic001G206000 Sobic001G206000 Sobic003G317200--Sobic001G206000 Sobic001G441600 Sobic001G441600 Sobic003G317200--Sobic001G441600 Sobic004G231400 Sobic004G231400 Sobic003G317200--Sobic004G231400 Sobic001G149700 Sobic001G149700 Sobic003G317200--Sobic001G149700 Sobic003G317200--Sobic001G138300 Sobic006G109300--Sobic010G055500 Sobic006G109300--Sobic010G071200 Sobic004G150400 Sobic004G150400 Sobic006G109300--Sobic004G150400 Sobic010G033400 Sobic010G033400 Sobic006G109300--Sobic010G033400 Sobic006G109300--Sobic002G365100 Sobic006G109300--Sobic008G142700 Sobic001G131800 Sobic001G131800 Sobic006G109300--Sobic001G131800 Sobic007G063200 Sobic007G063200 Sobic006G109300--Sobic007G063200 Sobic002G272800 Sobic002G272800 Sobic006G109300--Sobic002G272800 Sobic010G055500--Sobic010G071200 Sobic004G263900 Sobic004G263900 Sobic010G055500--Sobic004G263900 Sobic010G055500--Sobic001G149700 Sobic010G055500--Sobic004G231400 Sobic001G512900 Sobic001G512900 Sobic010G055500--Sobic001G512900 Sobic010G055500--Sobic006G109300 Sobic001G390500 Sobic001G390500 Sobic010G055500--Sobic001G390500 Sobic010G055500--Sobic008G142700 Sobic010G055500--Sobic004G150400 Sobic002G129000 Sobic002G129000 Sobic001G430800--Sobic002G129000 Sobic003G350600 Sobic003G350600 Sobic001G430800--Sobic003G350600 Sobic001G430800--Sobic001G138300 Sobic009G050700 Sobic009G050700 Sobic001G430800--Sobic009G050700 Sobic006G194500 Sobic006G194500 Sobic001G430800--Sobic006G194500 Sobic004G059000 Sobic004G059000 Sobic001G430800--Sobic004G059000 Sobic003G007500 Sobic003G007500 Sobic001G430800--Sobic003G007500 Sobic006G263900 Sobic006G263900 Sobic001G430800--Sobic006G263900 Sobic001G430800--Sobic010G055500 Sobic004G079100 Sobic004G079100 Sobic001G138300--Sobic004G079100 Sobic001G138300--Sobic003G350600 Sobic001G138300--Sobic001G430800 Sobic001G138300--Sobic004G231400 Sobic001G054200 Sobic001G054200 Sobic001G138300--Sobic001G054200 Sobic006G212100 Sobic006G212100 Sobic001G138300--Sobic006G212100 Sobic001G138300--Sobic001G441600 Sobic001G138300--Sobic006G263900 Sobic001G138300--Sobic002G129000 Sobic003G185200 Sobic003G185200 Sobic002G365100--Sobic003G185200 Sobic003G261300 Sobic003G261300 Sobic002G365100--Sobic003G261300 Sobic003G248500 Sobic003G248500 Sobic002G365100--Sobic003G248500 Sobic003G359300 Sobic003G359300 Sobic002G365100--Sobic003G359300 Sobic004G246700 Sobic004G246700 Sobic002G365100--Sobic004G246700 Sobic002G365100--Sobic010G055500 Sobic010G174800 Sobic010G174800 Sobic002G365100--Sobic010G174800 Sobic001G028400 Sobic001G028400 Sobic002G365100--Sobic001G028400 Sobic006G128800 Sobic006G128800 Sobic002G365100--Sobic006G128800 Sobic005G167300 Sobic005G167300 Sobic005G046100--Sobic005G167300 Sobic005G046100--Sobic004G150400 Sobic001G420700 Sobic001G420700 Sobic005G046100--Sobic001G420700 Sobic005G046100--Sobic006G109300 Sobic004G198000 Sobic004G198000 Sobic005G046100--Sobic004G198000 Sobic005G046100--Sobic010G055500 Sobic009G137800 Sobic009G137800 Sobic005G046100--Sobic009G137800 Sobic001G290200 Sobic001G290200 Sobic005G046100--Sobic001G290200 Sobic003G026300 Sobic003G026300 Sobic005G046100--Sobic003G026300 Sobic010G071200--Sobic010G055500 Sobic010G071200--Sobic001G149700 Sobic010G071200--Sobic004G231400 Sobic010G071200--Sobic004G263900 Sobic010G071200--Sobic008G142700 Sobic010G071200--Sobic001G512900 Sobic001G478300 Sobic001G478300 Sobic010G071200--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic010G071200--Sobic006G257900 Sobic001G083600 Sobic001G083600 Sobic010G071200--Sobic001G083600 Sobic009G134600 Sobic009G134600 Sobic009G230700--Sobic009G134600 Sobic003G119800 Sobic003G119800 Sobic009G230700--Sobic003G119800 Sobic003G424400 Sobic003G424400 Sobic009G230700--Sobic003G424400 Sobic009G230700--Sobic003G317200 Sobic002G330300 Sobic002G330300 Sobic009G230700--Sobic002G330300 Sobic004G347900 Sobic004G347900 Sobic009G230700--Sobic004G347900 Sobic003G056500 Sobic003G056500 Sobic009G230700--Sobic003G056500 Sobic009G230700--Sobic005G046100 Sobic002G119800 Sobic002G119800 Sobic009G230700--Sobic002G119800
Octagon: transcription factors


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