Gene annotation
Transcriptome id Sobic.006G213601.1
Synonym -
Functional annotation -
UniProt A0A1Z5RF39
Pfam PF12274
Panther DB PTHR23068 PTHR23068:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os05g44780.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G332000 alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed K00736: alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
2 Sobic.002G119800 arginyl-tRNA synthetase, putative, expressed -
3 Sobic.009G059700 thioredoxin, putative, expressed K03671: thioredoxin 1
4 Sobic.002G400200 CS domain containing protein, putative, expressed -
5 Sobic.006G194500 expressed protein -
6 Sobic.003G119800 Expressed in older stem(PubMedID : 28649278)@no apical meristem protein, putative, expressed -
7 Sobic.007G006900 shwachman-Bodian-Diamond syndrome protein, putative, expressed K14574: SDO1, ribosome maturation protein SDO1
8 Sobic.006G225600 protein phosphatase 2C, putative, expressed K17506: PPM1L, protein phosphatase 1L
9 Sobic.004G267300 bg55, putative, expressed -
10 Sobic.002G114400 GAGA-binding protein, putative, expressed -
11 Sobic.006G055400 hydroxyproline-rich glycoprotein family protein, putative, expressed -
12 Sobic.001G262900 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K10801: methyl-CpG-binding domain protein 4
13 Sobic.010G174500 protein kinase family protein, putative, expressed -
14 Sobic.001G430800 GA17271-PA, putative, expressed -
15 Sobic.009G167600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.001G351700 calmodulin-binding transcription activator, putative, expressed -
17 Sobic.004G152601 - -
18 Sobic.009G137800 expressed protein -
19 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
20 Sobic.003G044200 C2 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic006G213601 Sobic006G213601 Sobic004G332000 Sobic004G332000 Sobic006G213601--Sobic004G332000 Sobic002G119800 Sobic002G119800 Sobic006G213601--Sobic002G119800 Sobic009G059700 Sobic009G059700 Sobic006G213601--Sobic009G059700 Sobic002G400200 Sobic002G400200 Sobic006G213601--Sobic002G400200 Sobic006G194500 Sobic006G194500 Sobic006G213601--Sobic006G194500 Sobic003G119800 Sobic003G119800 Sobic006G213601--Sobic003G119800 Sobic007G006900 Sobic007G006900 Sobic006G213601--Sobic007G006900 Sobic006G225600 Sobic006G225600 Sobic006G213601--Sobic006G225600 Sobic004G267300 Sobic004G267300 Sobic006G213601--Sobic004G267300 Sobic004G332000--Sobic002G119800 Sobic004G332000--Sobic006G213601 Sobic001G262900 Sobic001G262900 Sobic004G332000--Sobic001G262900 Sobic001G072200 Sobic001G072200 Sobic004G332000--Sobic001G072200 Sobic003G374500 Sobic003G374500 Sobic004G332000--Sobic003G374500 Sobic006G255100 Sobic006G255100 Sobic004G332000--Sobic006G255100 Sobic004G152601 Sobic004G152601 Sobic004G332000--Sobic004G152601 Sobic007G136700 Sobic007G136700 Sobic004G332000--Sobic007G136700 Sobic002G067100 Sobic002G067100 Sobic004G332000--Sobic002G067100 Sobic002G119800--Sobic004G332000 Sobic002G119800--Sobic009G059700 Sobic002G119800--Sobic006G213601 Sobic008G016900 Sobic008G016900 Sobic002G119800--Sobic008G016900 Sobic001G162100 Sobic001G162100 Sobic002G119800--Sobic001G162100 Sobic009G230700 Sobic009G230700 Sobic002G119800--Sobic009G230700 Sobic009G134600 Sobic009G134600 Sobic002G119800--Sobic009G134600 Sobic007G011000 Sobic007G011000 Sobic002G119800--Sobic007G011000 Sobic004G145200 Sobic004G145200 Sobic002G119800--Sobic004G145200 Sobic009G059700--Sobic001G162100 Sobic009G059700--Sobic008G016900 Sobic001G283500 Sobic001G283500 Sobic009G059700--Sobic001G283500 Sobic009G059700--Sobic006G225600 Sobic002G330300 Sobic002G330300 Sobic009G059700--Sobic002G330300 Sobic002G368400 Sobic002G368400 Sobic009G059700--Sobic002G368400 Sobic009G059700--Sobic002G119800 Sobic009G059700--Sobic009G134600 Sobic010G062800 Sobic010G062800 Sobic009G059700--Sobic010G062800 Sobic002G400200--Sobic007G006900 Sobic005G104400 Sobic005G104400 Sobic002G400200--Sobic005G104400 Sobic001G262700 Sobic001G262700 Sobic002G400200--Sobic001G262700 Sobic002G134600 Sobic002G134600 Sobic002G400200--Sobic002G134600 Sobic009G167600 Sobic009G167600 Sobic002G400200--Sobic009G167600 Sobic010G174500 Sobic010G174500 Sobic002G400200--Sobic010G174500 Sobic004G306500 Sobic004G306500 Sobic002G400200--Sobic004G306500 Sobic002G400200--Sobic003G119800 Sobic003G309200 Sobic003G309200 Sobic002G400200--Sobic003G309200 Sobic001G323000 Sobic001G323000 Sobic006G194500--Sobic001G323000 Sobic009G228700 Sobic009G228700 Sobic006G194500--Sobic009G228700 Sobic010G130000 Sobic010G130000 Sobic006G194500--Sobic010G130000 Sobic009G138100 Sobic009G138100 Sobic006G194500--Sobic009G138100 Sobic002G352600 Sobic002G352600 Sobic006G194500--Sobic002G352600 Sobic006G148200 Sobic006G148200 Sobic006G194500--Sobic006G148200 Sobic001G466700 Sobic001G466700 Sobic006G194500--Sobic001G466700 Sobic002G418700 Sobic002G418700 Sobic006G194500--Sobic002G418700 Sobic006G249700 Sobic006G249700 Sobic006G194500--Sobic006G249700 Sobic003G119800--Sobic009G134600 Sobic008G189400 Sobic008G189400 Sobic003G119800--Sobic008G189400 Sobic001G290200 Sobic001G290200 Sobic003G119800--Sobic001G290200 Sobic009G195300 Sobic009G195300 Sobic003G119800--Sobic009G195300 Sobic004G031600 Sobic004G031600 Sobic003G119800--Sobic004G031600 Sobic001G463000 Sobic001G463000 Sobic003G119800--Sobic001G463000 Sobic001G472600 Sobic001G472600 Sobic003G119800--Sobic001G472600 Sobic003G119800--Sobic009G230700 Sobic003G119800--Sobic009G167600 Sobic007G006900--Sobic002G134600 Sobic001G425800 Sobic001G425800 Sobic007G006900--Sobic001G425800 Sobic003G328600 Sobic003G328600 Sobic007G006900--Sobic003G328600 Sobic001G362200 Sobic001G362200 Sobic007G006900--Sobic001G362200 Sobic007G006900--Sobic002G400200 Sobic010G249100 Sobic010G249100 Sobic007G006900--Sobic010G249100 Sobic002G067600 Sobic002G067600 Sobic007G006900--Sobic002G067600 Sobic009G238850 Sobic009G238850 Sobic007G006900--Sobic009G238850 Sobic007G006900--Sobic003G119800 Sobic004G234900 Sobic004G234900 Sobic006G225600--Sobic004G234900 Sobic002G251700 Sobic002G251700 Sobic006G225600--Sobic002G251700 Sobic006G225600--Sobic001G162100 Sobic001G098200 Sobic001G098200 Sobic006G225600--Sobic001G098200 Sobic003G295400 Sobic003G295400 Sobic006G225600--Sobic003G295400 Sobic002G122700 Sobic002G122700 Sobic006G225600--Sobic002G122700 Sobic004G274400 Sobic004G274400 Sobic006G225600--Sobic004G274400 Sobic001G051200 Sobic001G051200 Sobic006G225600--Sobic001G051200 Sobic001G434900 Sobic001G434900 Sobic006G225600--Sobic001G434900 Sobic009G137800 Sobic009G137800 Sobic004G267300--Sobic009G137800 Sobic007G134600 Sobic007G134600 Sobic004G267300--Sobic007G134600 Sobic008G025900 Sobic008G025900 Sobic004G267300--Sobic008G025900 Sobic003G056100 Sobic003G056100 Sobic004G267300--Sobic003G056100 Sobic001G351700 Sobic001G351700 Sobic004G267300--Sobic001G351700 Sobic009G172400 Sobic009G172400 Sobic004G267300--Sobic009G172400 Sobic002G324200 Sobic002G324200 Sobic004G267300--Sobic002G324200 Sobic010G056000 Sobic010G056000 Sobic004G267300--Sobic010G056000 Sobic004G132150 Sobic004G132150 Sobic004G267300--Sobic004G132150
Octagon: transcription factors


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