Gene annotation
Transcriptome id Sobic.004G332000.2,Sobic.004G332000.3
Synonym Sb04g036090
Functional annotation alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed
UniProt C5XV13
Pfam PF05060
Panther DB PTHR12871 PTHR12871:SF0
NCBI CDD KOG2791; N-acetylglucosaminyltransferase
KEGG Orthology K00736; alpha-1,6-mannosyl-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
Gene Ontology GO:0016021; integral component of membrane GO:0009312oligosaccharide biosynthetic process GO:0008455alpha-1,6-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity GO:0005795Golgi stack


Orthologs (automatic annotation)
TAIR AT2G05320 : beta-1,2-N-acetylglucosaminyltransferase II
RAP-DB (Rice) LOC_Os02g55470.1 : alpha-1,6-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a032916
Brachypodium KQK01167
Barley HORVU6Hr1G085950.5 , HORVU6Hr1G085950.4 , HORVU6Hr1G085950.7 , HORVU6Hr1G085950.6 , HORVU6Hr1G085950.1 , HORVU6Hr1G085950.3 , HORVU6Hr1G085950.2
Wheat -
Populus -


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cDNA sequences
Sobic.004G332000


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G119800 arginyl-tRNA synthetase, putative, expressed -
2 Sobic.006G213601 - -
3 Sobic.001G262900 hhH-GPD superfamily base excision DNA repair protein, putative, expressed K10801: methyl-CpG-binding domain protein 4
4 Sobic.001G072200 metallo-beta-lactamase family protein, putative, expressed -
5 Sobic.003G374500 pentatricopeptide repeat domain containing protein, putative, expressed -
6 Sobic.006G255100 peptidyl-prolyl cis-trans isomerase, putative, expressed K09578: peptidyl-prolyl cis-trans isomerase NIMA-interacting 1
7 Sobic.004G152601 - -
8 Sobic.007G136700 YGL010w, putative, expressed -
9 Sobic.002G067100 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
10 Sobic.005G122900 - -
11 Sobic.007G007900 mago nashi, putative, expressed K12877: protein mago nashi
12 Sobic.009G230700 Trihelix Family(PubMedID : 24864043)@transcription factor like protein, putative, expressed -
13 Sobic.003G142700 expressed protein -
14 Sobic.001G420700 clathrin assembly protein, putative, expressed -
15 Sobic.003G051200 Complex I intermediate-associated protein 30 domain containing protein, putative, expressed K18159: NDUFAF1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1
16 Sobic.010G012600 expressed protein -
17 Sobic.009G134600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@gibberellin receptor GID1L2, putative, expressed K14493: gibberellin receptor GID1
18 Sobic.004G072800 expressed protein -
19 Sobic.002G114400 GAGA-binding protein, putative, expressed -
20 Sobic.002G189700 nucleobase-ascorbate transporter, putative, expressed -


Gene co-expression network
sample Sobic004G332000 Sobic004G332000 Sobic002G119800 Sobic002G119800 Sobic004G332000--Sobic002G119800 Sobic006G213601 Sobic006G213601 Sobic004G332000--Sobic006G213601 Sobic001G262900 Sobic001G262900 Sobic004G332000--Sobic001G262900 Sobic001G072200 Sobic001G072200 Sobic004G332000--Sobic001G072200 Sobic003G374500 Sobic003G374500 Sobic004G332000--Sobic003G374500 Sobic006G255100 Sobic006G255100 Sobic004G332000--Sobic006G255100 Sobic004G152601 Sobic004G152601 Sobic004G332000--Sobic004G152601 Sobic007G136700 Sobic007G136700 Sobic004G332000--Sobic007G136700 Sobic002G067100 Sobic002G067100 Sobic004G332000--Sobic002G067100 Sobic002G119800--Sobic004G332000 Sobic009G059700 Sobic009G059700 Sobic002G119800--Sobic009G059700 Sobic002G119800--Sobic006G213601 Sobic008G016900 Sobic008G016900 Sobic002G119800--Sobic008G016900 Sobic001G162100 Sobic001G162100 Sobic002G119800--Sobic001G162100 Sobic009G230700 Sobic009G230700 Sobic002G119800--Sobic009G230700 Sobic009G134600 Sobic009G134600 Sobic002G119800--Sobic009G134600 Sobic007G011000 Sobic007G011000 Sobic002G119800--Sobic007G011000 Sobic004G145200 Sobic004G145200 Sobic002G119800--Sobic004G145200 Sobic006G213601--Sobic004G332000 Sobic006G213601--Sobic002G119800 Sobic006G213601--Sobic009G059700 Sobic002G400200 Sobic002G400200 Sobic006G213601--Sobic002G400200 Sobic006G194500 Sobic006G194500 Sobic006G213601--Sobic006G194500 Sobic003G119800 Sobic003G119800 Sobic006G213601--Sobic003G119800 Sobic007G006900 Sobic007G006900 Sobic006G213601--Sobic007G006900 Sobic006G225600 Sobic006G225600 Sobic006G213601--Sobic006G225600 Sobic004G267300 Sobic004G267300 Sobic006G213601--Sobic004G267300 Sobic001G287101 Sobic001G287101 Sobic001G262900--Sobic001G287101 Sobic007G037301 Sobic007G037301 Sobic001G262900--Sobic007G037301 Sobic001G262900--Sobic003G374500 Sobic004G121000 Sobic004G121000 Sobic001G262900--Sobic004G121000 Sobic002G224450 Sobic002G224450 Sobic001G262900--Sobic002G224450 Sobic001G262900--Sobic004G152601 Sobic003G436900 Sobic003G436900 Sobic001G262900--Sobic003G436900 Sobic003G366850 Sobic003G366850 Sobic001G262900--Sobic003G366850 Sobic001G262900--Sobic004G332000 Sobic001G072200--Sobic004G332000 Sobic002G131900 Sobic002G131900 Sobic001G072200--Sobic002G131900 Sobic001G072200--Sobic002G119800 Sobic001G072200--Sobic001G262900 Sobic002G313500 Sobic002G313500 Sobic001G072200--Sobic002G313500 Sobic001G072200--Sobic003G374500 Sobic006G055400 Sobic006G055400 Sobic001G072200--Sobic006G055400 Sobic010G017800 Sobic010G017800 Sobic001G072200--Sobic010G017800 Sobic001G072200--Sobic004G152601 Sobic008G065400 Sobic008G065400 Sobic003G374500--Sobic008G065400 Sobic001G278600 Sobic001G278600 Sobic003G374500--Sobic001G278600 Sobic003G374500--Sobic003G366850 Sobic003G374500--Sobic007G037301 Sobic005G079700 Sobic005G079700 Sobic003G374500--Sobic005G079700 Sobic001G140200 Sobic001G140200 Sobic003G374500--Sobic001G140200 Sobic003G374500--Sobic001G262900 Sobic003G266700 Sobic003G266700 Sobic003G374500--Sobic003G266700 Sobic002G431200 Sobic002G431200 Sobic003G374500--Sobic002G431200 Sobic005G046100 Sobic005G046100 Sobic006G255100--Sobic005G046100 Sobic010G077600 Sobic010G077600 Sobic006G255100--Sobic010G077600 Sobic003G034500 Sobic003G034500 Sobic006G255100--Sobic003G034500 Sobic009G065000 Sobic009G065000 Sobic006G255100--Sobic009G065000 Sobic006G255100--Sobic004G332000 Sobic003G248500 Sobic003G248500 Sobic006G255100--Sobic003G248500 Sobic001G206000 Sobic001G206000 Sobic006G255100--Sobic001G206000 Sobic003G116700 Sobic003G116700 Sobic006G255100--Sobic003G116700 Sobic001G065700 Sobic001G065700 Sobic006G255100--Sobic001G065700 Sobic008G106400 Sobic008G106400 Sobic004G152601--Sobic008G106400 Sobic004G152601--Sobic008G065400 Sobic003G201850 Sobic003G201850 Sobic004G152601--Sobic003G201850 Sobic004G010800 Sobic004G010800 Sobic004G152601--Sobic004G010800 Sobic004G152601--Sobic001G262900 Sobic003G429500 Sobic003G429500 Sobic004G152601--Sobic003G429500 Sobic010G184900 Sobic010G184900 Sobic004G152601--Sobic010G184900 Sobic010G148750 Sobic010G148750 Sobic004G152601--Sobic010G148750 Sobic008G045600 Sobic008G045600 Sobic004G152601--Sobic008G045600 Sobic001G420700 Sobic001G420700 Sobic007G136700--Sobic001G420700 Sobic010G066300 Sobic010G066300 Sobic007G136700--Sobic010G066300 Sobic002G427900 Sobic002G427900 Sobic007G136700--Sobic002G427900 Sobic010G045833 Sobic010G045833 Sobic007G136700--Sobic010G045833 Sobic003G424400 Sobic003G424400 Sobic007G136700--Sobic003G424400 Sobic007G136700--Sobic004G332000 Sobic004G352900 Sobic004G352900 Sobic007G136700--Sobic004G352900 Sobic008G065800 Sobic008G065800 Sobic007G136700--Sobic008G065800 Sobic007G136700--Sobic005G046100 Sobic002G067600 Sobic002G067600 Sobic002G067100--Sobic002G067600 Sobic006G052500 Sobic006G052500 Sobic002G067100--Sobic006G052500 Sobic001G127000 Sobic001G127000 Sobic002G067100--Sobic001G127000 Sobic002G067100--Sobic001G262900 Sobic003G142700 Sobic003G142700 Sobic002G067100--Sobic003G142700 Sobic003G084750 Sobic003G084750 Sobic002G067100--Sobic003G084750 Sobic003G051200 Sobic003G051200 Sobic002G067100--Sobic003G051200 Sobic006G174975 Sobic006G174975 Sobic002G067100--Sobic006G174975 Sobic007G010000 Sobic007G010000 Sobic002G067100--Sobic007G010000
Octagon: transcription factors


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