Gene annotation
Transcriptome id Sobic.001G420700.1
Synonym Sb01g039590
Functional annotation clathrin assembly protein, putative, expressed
UniProt C5WPG6
Pfam PF07651
Panther DB PTHR22951 PTHR22951:SF13
NCBI CDD KOG0251; Clathrin assembly protein AP180 and related proteins, contain ENTH domain
KEGG Orthology -
Gene Ontology GO:0005543; phospholipid binding


Orthologs (automatic annotation)
TAIR AT2G25430 : epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-related
RAP-DB (Rice) LOC_Os03g16800.2 : clathrin assembly protein, putative, expressed
MaizeGDB (Corn) Zm00025a037627 , Zm00025a001846 , Zm00025a037358 , Zm00025a052754 , Zm00025a003905 , Zm00025a050923 , Zm00025a058278
Brachypodium KQK22337 , KQK07700 , KQK06147
Barley HORVU4Hr1G059660.1 , HORVU4Hr1G059660.2 , HORVU4Hr1G059660.3
Wheat TraesCS4A02G097200 , TraesCS4D02G208100
Populus -


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cDNA sequences
Sobic.001G420700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G046100 bZIP transcription factor domain containing protein, expressed -
2 Sobic.008G188700 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
3 Sobic.007G136700 YGL010w, putative, expressed -
4 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
5 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
6 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
7 Sobic.003G424400 Spotted leaf protein(PubMedID : 24906815)@armadillo repeat-containing protein, putative, expressed K08332: vacuolar protein 8
8 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
9 Sobic.001G069800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
10 Sobic.004G086100 tetratricopeptide repeat domain containing protein, expressed -
11 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
12 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
13 Sobic.004G347900 protein kinase APK1A, chloroplast precursor, putative, expressed -
14 Sobic.003G030800 prenylated rab acceptor, putative, expressed -
15 Sobic.006G109300 protein binding protein, putative, expressed -
16 Sobic.001G512600 protein phosphatase 2C, putative, expressed -
17 Sobic.008G139700 bromodomain associated family protein, expressed K14649: transcription initiation factor TFIID subunit 8
18 Sobic.004G301900 potyvirus VPg interacting protein, putative, expressed -
19 Sobic.003G154700 stripe rust resistance protein Yr10, putative, expressed -
20 Sobic.008G136000 DnaK family protein, putative, expressed K03283: heat shock 70kDa protein 1/2/6/8


Gene co-expression network
sample Sobic001G420700 Sobic001G420700 Sobic005G046100 Sobic005G046100 Sobic001G420700--Sobic005G046100 Sobic008G188700 Sobic008G188700 Sobic001G420700--Sobic008G188700 Sobic007G136700 Sobic007G136700 Sobic001G420700--Sobic007G136700 Sobic001G441600 Sobic001G441600 Sobic001G420700--Sobic001G441600 Sobic003G116700 Sobic003G116700 Sobic001G420700--Sobic003G116700 Sobic004G150400 Sobic004G150400 Sobic001G420700--Sobic004G150400 Sobic003G424400 Sobic003G424400 Sobic001G420700--Sobic003G424400 Sobic003G317200 Sobic003G317200 Sobic001G420700--Sobic003G317200 Sobic001G069800 Sobic001G069800 Sobic001G420700--Sobic001G069800 Sobic005G167300 Sobic005G167300 Sobic005G046100--Sobic005G167300 Sobic005G046100--Sobic004G150400 Sobic005G046100--Sobic001G420700 Sobic006G109300 Sobic006G109300 Sobic005G046100--Sobic006G109300 Sobic004G198000 Sobic004G198000 Sobic005G046100--Sobic004G198000 Sobic010G055500 Sobic010G055500 Sobic005G046100--Sobic010G055500 Sobic009G137800 Sobic009G137800 Sobic005G046100--Sobic009G137800 Sobic001G290200 Sobic001G290200 Sobic005G046100--Sobic001G290200 Sobic003G026300 Sobic003G026300 Sobic005G046100--Sobic003G026300 Sobic007G026100 Sobic007G026100 Sobic008G188700--Sobic007G026100 Sobic008G188700--Sobic001G420700 Sobic009G195900 Sobic009G195900 Sobic008G188700--Sobic009G195900 Sobic010G105600 Sobic010G105600 Sobic008G188700--Sobic010G105600 Sobic004G086100 Sobic004G086100 Sobic008G188700--Sobic004G086100 Sobic003G405700 Sobic003G405700 Sobic008G188700--Sobic003G405700 Sobic001G105100 Sobic001G105100 Sobic008G188700--Sobic001G105100 Sobic003G052400 Sobic003G052400 Sobic008G188700--Sobic003G052400 Sobic009G050700 Sobic009G050700 Sobic008G188700--Sobic009G050700 Sobic007G136700--Sobic001G420700 Sobic010G066300 Sobic010G066300 Sobic007G136700--Sobic010G066300 Sobic002G427900 Sobic002G427900 Sobic007G136700--Sobic002G427900 Sobic010G045833 Sobic010G045833 Sobic007G136700--Sobic010G045833 Sobic007G136700--Sobic003G424400 Sobic004G332000 Sobic004G332000 Sobic007G136700--Sobic004G332000 Sobic004G352900 Sobic004G352900 Sobic007G136700--Sobic004G352900 Sobic008G065800 Sobic008G065800 Sobic007G136700--Sobic008G065800 Sobic007G136700--Sobic005G046100 Sobic001G441600--Sobic003G116700 Sobic008G161000 Sobic008G161000 Sobic001G441600--Sobic008G161000 Sobic001G335400 Sobic001G335400 Sobic001G441600--Sobic001G335400 Sobic009G016201 Sobic009G016201 Sobic001G441600--Sobic009G016201 Sobic003G396000 Sobic003G396000 Sobic001G441600--Sobic003G396000 Sobic009G152200 Sobic009G152200 Sobic001G441600--Sobic009G152200 Sobic003G115800 Sobic003G115800 Sobic001G441600--Sobic003G115800 Sobic010G071200 Sobic010G071200 Sobic001G441600--Sobic010G071200 Sobic001G441600--Sobic003G317200 Sobic001G206000 Sobic001G206000 Sobic003G116700--Sobic001G206000 Sobic001G149700 Sobic001G149700 Sobic003G116700--Sobic001G149700 Sobic003G116700--Sobic001G441600 Sobic007G079700 Sobic007G079700 Sobic003G116700--Sobic007G079700 Sobic004G014000 Sobic004G014000 Sobic003G116700--Sobic004G014000 Sobic007G126200 Sobic007G126200 Sobic003G116700--Sobic007G126200 Sobic009G065000 Sobic009G065000 Sobic003G116700--Sobic009G065000 Sobic003G116700--Sobic010G055500 Sobic001G078500 Sobic001G078500 Sobic003G116700--Sobic001G078500 Sobic004G119000 Sobic004G119000 Sobic004G150400--Sobic004G119000 Sobic004G150400--Sobic010G055500 Sobic007G205800 Sobic007G205800 Sobic004G150400--Sobic007G205800 Sobic002G272800 Sobic002G272800 Sobic004G150400--Sobic002G272800 Sobic004G150400--Sobic010G071200 Sobic001G028400 Sobic001G028400 Sobic004G150400--Sobic001G028400 Sobic006G088100 Sobic006G088100 Sobic004G150400--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic004G150400--Sobic003G093600 Sobic004G150400--Sobic006G109300 Sobic003G119800 Sobic003G119800 Sobic003G424400--Sobic003G119800 Sobic009G230700 Sobic009G230700 Sobic003G424400--Sobic009G230700 Sobic003G424400--Sobic001G420700 Sobic009G195300 Sobic009G195300 Sobic003G424400--Sobic009G195300 Sobic009G134600 Sobic009G134600 Sobic003G424400--Sobic009G134600 Sobic008G189400 Sobic008G189400 Sobic003G424400--Sobic008G189400 Sobic003G424400--Sobic007G136700 Sobic006G025300 Sobic006G025300 Sobic003G424400--Sobic006G025300 Sobic007G178200 Sobic007G178200 Sobic003G424400--Sobic007G178200 Sobic003G317200--Sobic010G055500 Sobic003G317200--Sobic010G071200 Sobic003G317200--Sobic006G109300 Sobic008G142700 Sobic008G142700 Sobic003G317200--Sobic008G142700 Sobic003G317200--Sobic001G206000 Sobic003G317200--Sobic001G441600 Sobic004G231400 Sobic004G231400 Sobic003G317200--Sobic004G231400 Sobic003G317200--Sobic001G149700 Sobic001G138300 Sobic001G138300 Sobic003G317200--Sobic001G138300 Sobic009G026200 Sobic009G026200 Sobic001G069800--Sobic009G026200 Sobic001G069800--Sobic004G086100 Sobic004G067000 Sobic004G067000 Sobic001G069800--Sobic004G067000 Sobic004G134100 Sobic004G134100 Sobic001G069800--Sobic004G134100 Sobic001G069800--Sobic001G420700 Sobic004G006700 Sobic004G006700 Sobic001G069800--Sobic004G006700 Sobic003G151300 Sobic003G151300 Sobic001G069800--Sobic003G151300 Sobic001G467000 Sobic001G467000 Sobic001G069800--Sobic001G467000 Sobic008G139700 Sobic008G139700 Sobic001G069800--Sobic008G139700
Octagon: transcription factors


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