Gene annotation
Transcriptome id Sobic.001G441600.1
Synonym Sb01g041500
Functional annotation potyvirus VPg interacting protein, putative, expressed
UniProt C5WRK9
Pfam PF07227 PF16312
Panther DB PTHR21736 PTHR21736:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G14740 : Protein of unknown function (DUF1423)
RAP-DB (Rice) LOC_Os03g13590.1 : potyvirus VPg interacting protein, putative, expressed
MaizeGDB (Corn) Zm00025a026233 , Zm00025a026714 , Zm00025a001502 , Zm00025a052935
Brachypodium PNT77772
Barley HORVU4Hr1G083280.1 , HORVU4Hr1G064160.9 , HORVU4Hr1G064160.8 , HORVU4Hr1G064160.3 , HORVU4Hr1G064160.2 , HORVU4Hr1G064160.1 , HORVU4Hr1G064160.7 , HORVU4Hr1G064160.6 , HORVU4Hr1G064160.5 , HORVU4Hr1G064160.4 , HORVU2Hr1G079630.2 , HORVU2Hr1G079630.1
Wheat TraesCS4B02G229300 , TraesCS4D02G230400
Populus -


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cDNA sequences
Sobic.001G441600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G116700 hydrolase, alpha/beta fold family domain containing protein, expressed -
2 Sobic.008G161000 protein kinase domain containing protein, expressed -
3 Sobic.001G335400 protein of unknown function DUF1675 domain containing protein, expressed -
4 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
5 Sobic.003G396000 copine, putative, expressed K16280: E3 ubiquitin-protein ligase RGLG
6 Sobic.009G152200 OsFBT7 - F-box and tubby domain containing protein, expressed -
7 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
8 Sobic.010G071200 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@ubiquitin-conjugating enzyme, putative, expressed K04554: UBE2J2, NCUBE2, ubiquitin-conjugating enzyme E2 J2
9 Sobic.003G317200 vacuolar protein sorting-associated protein 28 homolog 2, putative, expressed K12184: ESCRT-I complex subunit VPS28
10 Sobic.003G000800 RWP-RK domain-containing protein, putative, expressed -
11 Sobic.001G076000 PHLOEM 2-LIKE A10, putative, expressed -
12 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
13 Sobic.008G142700 expressed protein -
14 Sobic.004G079100 zinc finger A20 and AN1 domain-containing stress-associated protein, putative, expressed -
15 Sobic.004G172700 plant neutral invertase domain containing protein, expressed -
16 Sobic.010G144400 glycosyltransferase, putative, expressed -
17 Sobic.001G138300 zinc finger, C3HC4 type domain containing protein, expressed K10666: E3 ubiquitin-protein ligase RNF5
18 Sobic.003G332401 - K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other
19 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
20 Sobic.006G256500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -


Gene co-expression network
sample Sobic001G441600 Sobic001G441600 Sobic003G116700 Sobic003G116700 Sobic001G441600--Sobic003G116700 Sobic008G161000 Sobic008G161000 Sobic001G441600--Sobic008G161000 Sobic001G335400 Sobic001G335400 Sobic001G441600--Sobic001G335400 Sobic009G016201 Sobic009G016201 Sobic001G441600--Sobic009G016201 Sobic003G396000 Sobic003G396000 Sobic001G441600--Sobic003G396000 Sobic009G152200 Sobic009G152200 Sobic001G441600--Sobic009G152200 Sobic003G115800 Sobic003G115800 Sobic001G441600--Sobic003G115800 Sobic010G071200 Sobic010G071200 Sobic001G441600--Sobic010G071200 Sobic003G317200 Sobic003G317200 Sobic001G441600--Sobic003G317200 Sobic001G206000 Sobic001G206000 Sobic003G116700--Sobic001G206000 Sobic001G149700 Sobic001G149700 Sobic003G116700--Sobic001G149700 Sobic003G116700--Sobic001G441600 Sobic007G079700 Sobic007G079700 Sobic003G116700--Sobic007G079700 Sobic004G014000 Sobic004G014000 Sobic003G116700--Sobic004G014000 Sobic007G126200 Sobic007G126200 Sobic003G116700--Sobic007G126200 Sobic009G065000 Sobic009G065000 Sobic003G116700--Sobic009G065000 Sobic010G055500 Sobic010G055500 Sobic003G116700--Sobic010G055500 Sobic001G078500 Sobic001G078500 Sobic003G116700--Sobic001G078500 Sobic003G249800 Sobic003G249800 Sobic008G161000--Sobic003G249800 Sobic009G033700 Sobic009G033700 Sobic008G161000--Sobic009G033700 Sobic008G161000--Sobic009G152200 Sobic001G037000 Sobic001G037000 Sobic008G161000--Sobic001G037000 Sobic009G129000 Sobic009G129000 Sobic008G161000--Sobic009G129000 Sobic008G161000--Sobic009G016201 Sobic010G204300 Sobic010G204300 Sobic008G161000--Sobic010G204300 Sobic010G204600 Sobic010G204600 Sobic008G161000--Sobic010G204600 Sobic010G213400 Sobic010G213400 Sobic008G161000--Sobic010G213400 Sobic001G335400--Sobic003G249800 Sobic004G300900 Sobic004G300900 Sobic001G335400--Sobic004G300900 Sobic001G335400--Sobic009G016201 Sobic004G196300 Sobic004G196300 Sobic001G335400--Sobic004G196300 Sobic001G335400--Sobic001G441600 Sobic004G107600 Sobic004G107600 Sobic001G335400--Sobic004G107600 Sobic001G335400--Sobic003G115800 Sobic005G092800 Sobic005G092800 Sobic001G335400--Sobic005G092800 Sobic003G344600 Sobic003G344600 Sobic001G335400--Sobic003G344600 Sobic002G263800 Sobic002G263800 Sobic009G016201--Sobic002G263800 Sobic007G095400 Sobic007G095400 Sobic009G016201--Sobic007G095400 Sobic008G132800 Sobic008G132800 Sobic009G016201--Sobic008G132800 Sobic004G172700 Sobic004G172700 Sobic009G016201--Sobic004G172700 Sobic009G016201--Sobic003G249800 Sobic009G016201--Sobic001G037000 Sobic009G016201--Sobic008G161000 Sobic010G237000 Sobic010G237000 Sobic009G016201--Sobic010G237000 Sobic010G029400 Sobic010G029400 Sobic009G016201--Sobic010G029400 Sobic003G396000--Sobic001G441600 Sobic006G218700 Sobic006G218700 Sobic003G396000--Sobic006G218700 Sobic003G379700 Sobic003G379700 Sobic003G396000--Sobic003G379700 Sobic003G396000--Sobic010G204300 Sobic001G076000 Sobic001G076000 Sobic003G396000--Sobic001G076000 Sobic003G332401 Sobic003G332401 Sobic003G396000--Sobic003G332401 Sobic004G293700 Sobic004G293700 Sobic003G396000--Sobic004G293700 Sobic001G478300 Sobic001G478300 Sobic003G396000--Sobic001G478300 Sobic009G059700 Sobic009G059700 Sobic003G396000--Sobic009G059700 Sobic009G152200--Sobic008G161000 Sobic007G186300 Sobic007G186300 Sobic009G152200--Sobic007G186300 Sobic007G059900 Sobic007G059900 Sobic009G152200--Sobic007G059900 Sobic001G403700 Sobic001G403700 Sobic009G152200--Sobic001G403700 Sobic001G330700 Sobic001G330700 Sobic009G152200--Sobic001G330700 Sobic009G152200--Sobic009G016201 Sobic009G152200--Sobic003G115800 Sobic003G248600 Sobic003G248600 Sobic009G152200--Sobic003G248600 Sobic009G152200--Sobic003G249800 Sobic003G115800--Sobic007G186300 Sobic003G115800--Sobic004G300900 Sobic003G220600 Sobic003G220600 Sobic003G115800--Sobic003G220600 Sobic002G078400 Sobic002G078400 Sobic003G115800--Sobic002G078400 Sobic003G115800--Sobic010G204300 Sobic001G054200 Sobic001G054200 Sobic003G115800--Sobic001G054200 Sobic002G202300 Sobic002G202300 Sobic003G115800--Sobic002G202300 Sobic004G079100 Sobic004G079100 Sobic003G115800--Sobic004G079100 Sobic003G115800--Sobic004G293700 Sobic010G071200--Sobic010G055500 Sobic010G071200--Sobic001G149700 Sobic004G231400 Sobic004G231400 Sobic010G071200--Sobic004G231400 Sobic004G263900 Sobic004G263900 Sobic010G071200--Sobic004G263900 Sobic008G142700 Sobic008G142700 Sobic010G071200--Sobic008G142700 Sobic001G512900 Sobic001G512900 Sobic010G071200--Sobic001G512900 Sobic010G071200--Sobic001G478300 Sobic006G257900 Sobic006G257900 Sobic010G071200--Sobic006G257900 Sobic001G083600 Sobic001G083600 Sobic010G071200--Sobic001G083600 Sobic003G317200--Sobic010G055500 Sobic003G317200--Sobic010G071200 Sobic006G109300 Sobic006G109300 Sobic003G317200--Sobic006G109300 Sobic003G317200--Sobic008G142700 Sobic003G317200--Sobic001G206000 Sobic003G317200--Sobic001G441600 Sobic003G317200--Sobic004G231400 Sobic003G317200--Sobic001G149700 Sobic001G138300 Sobic001G138300 Sobic003G317200--Sobic001G138300
Octagon: transcription factors


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