Gene annotation
Transcriptome id Sobic.001G335400.1,Sobic.001G335400.3,Sobic.001G335400.2
Synonym AFP3
Functional annotation protein of unknown function DUF1675 domain containing protein, expressed
UniProt A0A1Z5S9H6 , A0A1B6QMI0 , A0A1Z5S989
Pfam PF16136 PF16135 PF07897 PF16136 PF07897
Panther DB PTHR31413 PTHR31413:SF9
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0007165; signal transduction


Orthologs (automatic annotation)
TAIR AT1G13740 : ABI five binding protein 2
RAP-DB (Rice) LOC_Os03g30570.2,LOC_Os03g30570.1 : protein of unknown function DUF1675 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a052189 , Zm00025a002881
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.001G335400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G249800 60S ribosomal protein L18a-1, putative, expressed -
2 Sobic.004G300900 OsGrx_C3 - glutaredoxin subgroup I, expressed K03676: grxC, GLRX, glutaredoxin 3
3 Sobic.009G016201 - K09481: SEC61B, protein transport protein SEC61 subunit beta
4 Sobic.004G196300 ras-related protein, putative, expressed K07877: Ras-related protein Rab-2A
5 Sobic.001G441600 potyvirus VPg interacting protein, putative, expressed -
6 Sobic.004G107600 prefoldin subunit, putative, expressed K04798: pfdB, prefoldin beta subunit
7 Sobic.003G115800 miro, putative, expressed K07953: GTP-binding protein SAR1
8 Sobic.005G092800 expressed protein -
9 Sobic.003G344600 BAG domain containing protein, expressed -
10 Sobic.008G161000 protein kinase domain containing protein, expressed -
11 Sobic.002G282400 expressed protein -
12 Sobic.008G132800 expressed protein -
13 Sobic.002G068300 vesicle-associated membrane protein, putative, expressed K08511: vesicle-associated membrane protein 72
14 Sobic.002G022400 RNA recognition motif containing protein, putative, expressed K14411: RNA-binding protein Musashi
15 Sobic.006G256500 zinc finger C-x8-C-x5-C-x3-H type family protein, expressed -
16 Sobic.002G272900 homeobox associated leucine zipper, putative, expressed K09338: homeobox-leucine zipper protein
17 Sobic.001G529000 THO complex subunit 7, putative, expressed K13176: THO complex subunit 7
18 Sobic.001G331900 expressed protein -
19 Sobic.010G243200 ZOS6-08 - C2H2 zinc finger protein, expressed K14816: pre-60S factor REI1
20 Sobic.002G078400 ADP-ribosylation factor, putative, expressed K07937: ADP-ribosylation factor 1/2
K07977: Arf/Sar family, other


Gene co-expression network
sample Sobic001G335400 Sobic001G335400 Sobic003G249800 Sobic003G249800 Sobic001G335400--Sobic003G249800 Sobic004G300900 Sobic004G300900 Sobic001G335400--Sobic004G300900 Sobic009G016201 Sobic009G016201 Sobic001G335400--Sobic009G016201 Sobic004G196300 Sobic004G196300 Sobic001G335400--Sobic004G196300 Sobic001G441600 Sobic001G441600 Sobic001G335400--Sobic001G441600 Sobic004G107600 Sobic004G107600 Sobic001G335400--Sobic004G107600 Sobic003G115800 Sobic003G115800 Sobic001G335400--Sobic003G115800 Sobic005G092800 Sobic005G092800 Sobic001G335400--Sobic005G092800 Sobic003G344600 Sobic003G344600 Sobic001G335400--Sobic003G344600 Sobic008G161000 Sobic008G161000 Sobic003G249800--Sobic008G161000 Sobic001G037000 Sobic001G037000 Sobic003G249800--Sobic001G037000 Sobic009G033700 Sobic009G033700 Sobic003G249800--Sobic009G033700 Sobic002G046100 Sobic002G046100 Sobic003G249800--Sobic002G046100 Sobic002G282400 Sobic002G282400 Sobic003G249800--Sobic002G282400 Sobic002G330000 Sobic002G330000 Sobic003G249800--Sobic002G330000 Sobic009G143400 Sobic009G143400 Sobic003G249800--Sobic009G143400 Sobic002G211900 Sobic002G211900 Sobic003G249800--Sobic002G211900 Sobic003G181500 Sobic003G181500 Sobic003G249800--Sobic003G181500 Sobic002G078400 Sobic002G078400 Sobic004G300900--Sobic002G078400 Sobic006G141500 Sobic006G141500 Sobic004G300900--Sobic006G141500 Sobic009G198500 Sobic009G198500 Sobic004G300900--Sobic009G198500 Sobic001G331900 Sobic001G331900 Sobic004G300900--Sobic001G331900 Sobic001G005900 Sobic001G005900 Sobic004G300900--Sobic001G005900 Sobic004G225500 Sobic004G225500 Sobic004G300900--Sobic004G225500 Sobic008G058300 Sobic008G058300 Sobic004G300900--Sobic008G058300 Sobic004G300900--Sobic003G115800 Sobic001G445800 Sobic001G445800 Sobic004G300900--Sobic001G445800 Sobic002G263800 Sobic002G263800 Sobic009G016201--Sobic002G263800 Sobic007G095400 Sobic007G095400 Sobic009G016201--Sobic007G095400 Sobic008G132800 Sobic008G132800 Sobic009G016201--Sobic008G132800 Sobic004G172700 Sobic004G172700 Sobic009G016201--Sobic004G172700 Sobic009G016201--Sobic003G249800 Sobic009G016201--Sobic001G037000 Sobic009G016201--Sobic008G161000 Sobic010G237000 Sobic010G237000 Sobic009G016201--Sobic010G237000 Sobic010G029400 Sobic010G029400 Sobic009G016201--Sobic010G029400 Sobic010G018400 Sobic010G018400 Sobic004G196300--Sobic010G018400 Sobic004G196300--Sobic003G249800 Sobic001G309500 Sobic001G309500 Sobic004G196300--Sobic001G309500 Sobic001G034700 Sobic001G034700 Sobic004G196300--Sobic001G034700 Sobic003G155400 Sobic003G155400 Sobic004G196300--Sobic003G155400 Sobic004G196300--Sobic002G078400 Sobic006G182100 Sobic006G182100 Sobic004G196300--Sobic006G182100 Sobic004G066800 Sobic004G066800 Sobic004G196300--Sobic004G066800 Sobic010G153100 Sobic010G153100 Sobic004G196300--Sobic010G153100 Sobic003G116700 Sobic003G116700 Sobic001G441600--Sobic003G116700 Sobic001G441600--Sobic008G161000 Sobic001G441600--Sobic001G335400 Sobic001G441600--Sobic009G016201 Sobic003G396000 Sobic003G396000 Sobic001G441600--Sobic003G396000 Sobic009G152200 Sobic009G152200 Sobic001G441600--Sobic009G152200 Sobic001G441600--Sobic003G115800 Sobic010G071200 Sobic010G071200 Sobic001G441600--Sobic010G071200 Sobic003G317200 Sobic003G317200 Sobic001G441600--Sobic003G317200 Sobic004G107600--Sobic001G331900 Sobic003G362400 Sobic003G362400 Sobic004G107600--Sobic003G362400 Sobic001G377800 Sobic001G377800 Sobic004G107600--Sobic001G377800 Sobic010G182600 Sobic010G182600 Sobic004G107600--Sobic010G182600 Sobic004G107600--Sobic005G092800 Sobic005G157200 Sobic005G157200 Sobic004G107600--Sobic005G157200 Sobic004G107600--Sobic002G078400 Sobic003G321700 Sobic003G321700 Sobic004G107600--Sobic003G321700 Sobic004G107600--Sobic001G445800 Sobic007G186300 Sobic007G186300 Sobic003G115800--Sobic007G186300 Sobic003G115800--Sobic004G300900 Sobic003G220600 Sobic003G220600 Sobic003G115800--Sobic003G220600 Sobic003G115800--Sobic002G078400 Sobic010G204300 Sobic010G204300 Sobic003G115800--Sobic010G204300 Sobic001G054200 Sobic001G054200 Sobic003G115800--Sobic001G054200 Sobic002G202300 Sobic002G202300 Sobic003G115800--Sobic002G202300 Sobic004G079100 Sobic004G079100 Sobic003G115800--Sobic004G079100 Sobic004G293700 Sobic004G293700 Sobic003G115800--Sobic004G293700 Sobic001G019900 Sobic001G019900 Sobic005G092800--Sobic001G019900 Sobic005G092800--Sobic003G321700 Sobic005G092800--Sobic004G107600 Sobic005G092800--Sobic001G445800 Sobic010G213400 Sobic010G213400 Sobic005G092800--Sobic010G213400 Sobic005G092800--Sobic003G249800 Sobic005G092800--Sobic005G157200 Sobic005G092800--Sobic003G362400 Sobic009G094450 Sobic009G094450 Sobic005G092800--Sobic009G094450 Sobic003G344600--Sobic003G249800 Sobic001G009500 Sobic001G009500 Sobic003G344600--Sobic001G009500 Sobic003G429000 Sobic003G429000 Sobic003G344600--Sobic003G429000 Sobic009G180000 Sobic009G180000 Sobic003G344600--Sobic009G180000 Sobic001G054900 Sobic001G054900 Sobic003G344600--Sobic001G054900 Sobic003G344600--Sobic002G282400 Sobic002G335300 Sobic002G335300 Sobic003G344600--Sobic002G335300 Sobic003G344600--Sobic002G330000 Sobic003G344600--Sobic010G237000
Octagon: transcription factors


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