Gene annotation
Transcriptome id Sobic.003G154700.1
Synonym Sb03g013510, RPM1, RPS3
Functional annotation stripe rust resistance protein Yr10, putative, expressed
UniProt C5XJS4
Pfam PF13401
Panther DB PTHR23155 PTHR23155:SF561
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os01g23380.1 : stripe rust resistance protein Yr10, putative, expressed
MaizeGDB (Corn) Zm00025a024442
Brachypodium KQK04232
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
2 Sobic.007G035600 MSP domain containing protein, putative, expressed -
3 Sobic.001G464100 cytochrome b5-like Heme/Steroid binding domain containing protein, expressed -
4 Sobic.003G305400 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
5 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
6 Sobic.006G209500 transcription initiation factor IIE subunit beta, putative, expressed K03137: TFIIE2, GTF2E2, transcription initiation factor TFIIE subunit beta
7 Sobic.005G046100 bZIP transcription factor domain containing protein, expressed -
8 Sobic.001G478300 modifier of rudimentary protein, expressed K12185: ESCRT-I complex subunit VPS37
9 Sobic.010G111800 no apical meristem protein, putative, expressed -
10 Sobic.001G372000 OsFBT5 - F-box and tubby domain containing protein, expressed -
11 Sobic.003G295400 MAC/Perforin domain containing protein, putative, expressed -
12 Sobic.003G273100 vesicle transport v-SNARE protein, putative, expressed K08493: vesicle transport through interaction with t-SNAREs 1
13 Sobic.005G096300 Up-regulated in Setosphaeria turcica resistant genotype GA06/18 by S. turcica inoculation(PubMedID : 22050783)@-(PubMedID : 25928459)@disease resistance protein RPM1, putative, expressed K13457: RPM1, disease resistance protein RPM1
14 Sobic.001G123000 BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 precursor, putative, expressed -
15 Sobic.004G119000 OsFBK6 - F-box domain and kelch repeat containing protein, expressed -
16 Sobic.001G291100 tetraspanin family protein, putative, expressed -
17 Sobic.004G153600 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7
18 Sobic.001G427800 tyrosine protein kinase domain containing protein, putative, expressed -
19 Sobic.006G098200 steroid nuclear receptor, ligand-binding, putative, expressed -
20 Sobic.010G280100 expressed protein -


Gene co-expression network
sample Sobic003G154700 Sobic003G154700 Sobic004G150400 Sobic004G150400 Sobic003G154700--Sobic004G150400 Sobic007G035600 Sobic007G035600 Sobic003G154700--Sobic007G035600 Sobic001G464100 Sobic001G464100 Sobic003G154700--Sobic001G464100 Sobic003G305400 Sobic003G305400 Sobic003G154700--Sobic003G305400 Sobic001G467000 Sobic001G467000 Sobic003G154700--Sobic001G467000 Sobic006G209500 Sobic006G209500 Sobic003G154700--Sobic006G209500 Sobic005G046100 Sobic005G046100 Sobic003G154700--Sobic005G046100 Sobic001G478300 Sobic001G478300 Sobic003G154700--Sobic001G478300 Sobic010G111800 Sobic010G111800 Sobic003G154700--Sobic010G111800 Sobic004G119000 Sobic004G119000 Sobic004G150400--Sobic004G119000 Sobic010G055500 Sobic010G055500 Sobic004G150400--Sobic010G055500 Sobic007G205800 Sobic007G205800 Sobic004G150400--Sobic007G205800 Sobic002G272800 Sobic002G272800 Sobic004G150400--Sobic002G272800 Sobic010G071200 Sobic010G071200 Sobic004G150400--Sobic010G071200 Sobic001G028400 Sobic001G028400 Sobic004G150400--Sobic001G028400 Sobic006G088100 Sobic006G088100 Sobic004G150400--Sobic006G088100 Sobic003G093600 Sobic003G093600 Sobic004G150400--Sobic003G093600 Sobic006G109300 Sobic006G109300 Sobic004G150400--Sobic006G109300 Sobic007G035600--Sobic007G205800 Sobic001G347600 Sobic001G347600 Sobic007G035600--Sobic001G347600 Sobic003G324000 Sobic003G324000 Sobic007G035600--Sobic003G324000 Sobic007G035600--Sobic003G093600 Sobic004G143700 Sobic004G143700 Sobic007G035600--Sobic004G143700 Sobic009G198900 Sobic009G198900 Sobic007G035600--Sobic009G198900 Sobic001G368400 Sobic001G368400 Sobic007G035600--Sobic001G368400 Sobic009G087800 Sobic009G087800 Sobic007G035600--Sobic009G087800 SobicK016900 SobicK016900 Sobic007G035600--SobicK016900 Sobic001G464100--Sobic001G467000 Sobic001G371200 Sobic001G371200 Sobic001G464100--Sobic001G371200 Sobic001G464100--Sobic003G154700 Sobic001G291100 Sobic001G291100 Sobic001G464100--Sobic001G291100 Sobic001G119300 Sobic001G119300 Sobic001G464100--Sobic001G119300 Sobic002G313500 Sobic002G313500 Sobic001G464100--Sobic002G313500 Sobic001G281600 Sobic001G281600 Sobic001G464100--Sobic001G281600 Sobic003G045400 Sobic003G045400 Sobic001G464100--Sobic003G045400 Sobic010G249300 Sobic010G249300 Sobic001G464100--Sobic010G249300 Sobic010G145900 Sobic010G145900 Sobic003G305400--Sobic010G145900 Sobic009G235900 Sobic009G235900 Sobic003G305400--Sobic009G235900 Sobic003G305400--Sobic006G209500 Sobic003G305400--Sobic001G478300 Sobic003G305400--Sobic001G347600 Sobic001G372000 Sobic001G372000 Sobic003G305400--Sobic001G372000 Sobic003G305400--Sobic003G154700 Sobic003G081100 Sobic003G081100 Sobic003G305400--Sobic003G081100 Sobic010G264400 Sobic010G264400 Sobic003G305400--Sobic010G264400 Sobic001G467000--Sobic001G372000 Sobic001G467000--Sobic003G045400 Sobic001G467000--Sobic004G150400 Sobic001G512600 Sobic001G512600 Sobic001G467000--Sobic001G512600 Sobic001G467000--Sobic001G464100 Sobic001G467000--Sobic002G313500 Sobic001G467000--Sobic001G028400 Sobic010G211300 Sobic010G211300 Sobic001G467000--Sobic010G211300 Sobic001G467000--Sobic001G291100 Sobic006G209500--Sobic001G478300 Sobic004G271900 Sobic004G271900 Sobic006G209500--Sobic004G271900 Sobic006G209500--Sobic006G088100 Sobic006G209500--Sobic003G093600 Sobic002G324200 Sobic002G324200 Sobic006G209500--Sobic002G324200 Sobic009G117400 Sobic009G117400 Sobic006G209500--Sobic009G117400 Sobic006G209500--Sobic004G150400 Sobic002G262600 Sobic002G262600 Sobic006G209500--Sobic002G262600 Sobic006G209500--Sobic007G205800 Sobic005G167300 Sobic005G167300 Sobic005G046100--Sobic005G167300 Sobic005G046100--Sobic004G150400 Sobic001G420700 Sobic001G420700 Sobic005G046100--Sobic001G420700 Sobic005G046100--Sobic006G109300 Sobic004G198000 Sobic004G198000 Sobic005G046100--Sobic004G198000 Sobic005G046100--Sobic010G055500 Sobic009G137800 Sobic009G137800 Sobic005G046100--Sobic009G137800 Sobic001G290200 Sobic001G290200 Sobic005G046100--Sobic001G290200 Sobic003G026300 Sobic003G026300 Sobic005G046100--Sobic003G026300 Sobic004G231400 Sobic004G231400 Sobic001G478300--Sobic004G231400 Sobic001G478300--Sobic010G071200 Sobic001G478300--Sobic006G209500 Sobic001G427800 Sobic001G427800 Sobic001G478300--Sobic001G427800 Sobic001G149700 Sobic001G149700 Sobic001G478300--Sobic001G149700 Sobic001G478300--Sobic010G055500 Sobic004G263900 Sobic004G263900 Sobic001G478300--Sobic004G263900 Sobic003G273100 Sobic003G273100 Sobic001G478300--Sobic003G273100 Sobic004G274700 Sobic004G274700 Sobic001G478300--Sobic004G274700 Sobic010G111800--Sobic004G150400 Sobic005G096300 Sobic005G096300 Sobic010G111800--Sobic005G096300 Sobic003G136800 Sobic003G136800 Sobic010G111800--Sobic003G136800 Sobic010G111800--Sobic006G088100 Sobic004G083700 Sobic004G083700 Sobic010G111800--Sobic004G083700 Sobic010G111800--Sobic007G205800 Sobic010G111800--Sobic003G154700 Sobic003G226500 Sobic003G226500 Sobic010G111800--Sobic003G226500 Sobic010G111800--Sobic006G209500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.