Gene annotation
Transcriptome id Sobic.005G096300.1
Synonym RPM1, R gene homologue, Sb05g008350, St2A;St2A, RPS3
Functional annotation Up-regulated in Setosphaeria turcica resistant genotype GA06/18 by S. turcica inoculation (PubMedID : 22050783)
- (PubMedID : 25928459)
disease resistance protein RPM1, putative, expressed
UniProt C5Y1L1
Pfam PF00931
Panther DB PTHR23155 PTHR23155:SF624
NCBI CDD KOG4658; Apoptotic ATPase
KEGG Orthology K13457; RPM1, disease resistance protein RPM1
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G07040 : NB-ARC domain-containing disease resistance protein
RAP-DB (Rice) LOC_Os11g12050.2 : NBS-LRR type disease resistance protein, putative, expressed
MaizeGDB (Corn) Zm00025a033933
Brachypodium KQJ88881 , PNT60669 , KQJ81789
Barley HORVU4Hr1G015800.4 , HORVU4Hr1G015800.5 , HORVU4Hr1G015800.6 , HORVU4Hr1G015800.1 , HORVU4Hr1G015800.2 , HORVU4Hr1G015800.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.007G035600 MSP domain containing protein, putative, expressed -
2 Sobic.010G280100 expressed protein -
3 Sobic.010G111800 no apical meristem protein, putative, expressed -
4 Sobic.003G154700 stripe rust resistance protein Yr10, putative, expressed -
5 Sobic.009G232700 splicing factor U2AF, putative, expressed K12836: splicing factor U2AF 35 kDa subunit
6 Sobic.010G242300 TKL_IRAK_DUF26-lh.6 - DUF26 kinases have homology to DUF26 containing loci, expressed -
7 Sobic.004G119000 OsFBK6 - F-box domain and kelch repeat containing protein, expressed -
8 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
9 Sobic.001G368400 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
10 Sobic.001G258000 tyrosine protein kinase domain containing protein, putative, expressed K04733: interleukin-1 receptor-associated kinase 4
11 Sobic.009G198900 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
12 Sobic.004G083700 expressed protein -
13 Sobic.003G324000 3-hydroxybutyryl-CoA dehydrogenase, putative, expressed K00074: paaH, hbd, fadB, 3-hydroxybutyryl-CoA dehydrogenase
14 Sobic.007G130100 armadillo/beta-catenin repeat family protein, putative, expressed -
15 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
16 Sobic.005G002600 - -
17 Sobic.009G107500 - -
18 Sobic.001G410500 expressed protein -
19 Sobic.010G075700 - -
20 Sobic.001G291100 tetraspanin family protein, putative, expressed -


Gene co-expression network
sample Sobic005G096300 Sobic005G096300 Sobic007G035600 Sobic007G035600 Sobic005G096300--Sobic007G035600 Sobic010G280100 Sobic010G280100 Sobic005G096300--Sobic010G280100 Sobic010G111800 Sobic010G111800 Sobic005G096300--Sobic010G111800 Sobic003G154700 Sobic003G154700 Sobic005G096300--Sobic003G154700 Sobic009G232700 Sobic009G232700 Sobic005G096300--Sobic009G232700 Sobic010G242300 Sobic010G242300 Sobic005G096300--Sobic010G242300 Sobic004G119000 Sobic004G119000 Sobic005G096300--Sobic004G119000 Sobic004G150400 Sobic004G150400 Sobic005G096300--Sobic004G150400 Sobic001G368400 Sobic001G368400 Sobic005G096300--Sobic001G368400 Sobic007G205800 Sobic007G205800 Sobic007G035600--Sobic007G205800 Sobic001G347600 Sobic001G347600 Sobic007G035600--Sobic001G347600 Sobic003G324000 Sobic003G324000 Sobic007G035600--Sobic003G324000 Sobic003G093600 Sobic003G093600 Sobic007G035600--Sobic003G093600 Sobic004G143700 Sobic004G143700 Sobic007G035600--Sobic004G143700 Sobic009G198900 Sobic009G198900 Sobic007G035600--Sobic009G198900 Sobic007G035600--Sobic001G368400 Sobic009G087800 Sobic009G087800 Sobic007G035600--Sobic009G087800 SobicK016900 SobicK016900 Sobic007G035600--SobicK016900 Sobic010G280100--Sobic009G198900 Sobic010G280100--Sobic004G119000 Sobic010G280100--Sobic003G324000 Sobic007G052900 Sobic007G052900 Sobic010G280100--Sobic007G052900 Sobic008G136200 Sobic008G136200 Sobic010G280100--Sobic008G136200 Sobic010G280100--Sobic009G087800 Sobic010G280100--Sobic007G205800 Sobic010G280100--Sobic001G368400 Sobic006G273200 Sobic006G273200 Sobic010G280100--Sobic006G273200 Sobic010G111800--Sobic004G150400 Sobic010G111800--Sobic005G096300 Sobic003G136800 Sobic003G136800 Sobic010G111800--Sobic003G136800 Sobic006G088100 Sobic006G088100 Sobic010G111800--Sobic006G088100 Sobic004G083700 Sobic004G083700 Sobic010G111800--Sobic004G083700 Sobic010G111800--Sobic007G205800 Sobic010G111800--Sobic003G154700 Sobic003G226500 Sobic003G226500 Sobic010G111800--Sobic003G226500 Sobic006G209500 Sobic006G209500 Sobic010G111800--Sobic006G209500 Sobic003G154700--Sobic004G150400 Sobic003G154700--Sobic007G035600 Sobic001G464100 Sobic001G464100 Sobic003G154700--Sobic001G464100 Sobic003G305400 Sobic003G305400 Sobic003G154700--Sobic003G305400 Sobic001G467000 Sobic001G467000 Sobic003G154700--Sobic001G467000 Sobic003G154700--Sobic006G209500 Sobic005G046100 Sobic005G046100 Sobic003G154700--Sobic005G046100 Sobic001G478300 Sobic001G478300 Sobic003G154700--Sobic001G478300 Sobic003G154700--Sobic010G111800 Sobic001G107500 Sobic001G107500 Sobic009G232700--Sobic001G107500 Sobic003G298100 Sobic003G298100 Sobic009G232700--Sobic003G298100 Sobic009G022200 Sobic009G022200 Sobic009G232700--Sobic009G022200 Sobic008G175800 Sobic008G175800 Sobic009G232700--Sobic008G175800 Sobic009G232700--Sobic007G205800 Sobic009G232700--Sobic001G368400 Sobic001G131800 Sobic001G131800 Sobic009G232700--Sobic001G131800 Sobic009G232700--Sobic003G324000 Sobic010G056200 Sobic010G056200 Sobic009G232700--Sobic010G056200 Sobic009G107500 Sobic009G107500 Sobic010G242300--Sobic009G107500 Sobic010G242300--Sobic007G035600 Sobic010G242300--Sobic005G096300 Sobic010G242300--Sobic009G198900 Sobic004G195700 Sobic004G195700 Sobic010G242300--Sobic004G195700 Sobic005G012000 Sobic005G012000 Sobic010G242300--Sobic005G012000 Sobic005G222700 Sobic005G222700 Sobic010G242300--Sobic005G222700 Sobic004G020401 Sobic004G020401 Sobic010G242300--Sobic004G020401 Sobic007G073400 Sobic007G073400 Sobic010G242300--Sobic007G073400 Sobic004G119000--Sobic004G150400 Sobic004G119000--Sobic010G280100 Sobic001G291100 Sobic001G291100 Sobic004G119000--Sobic001G291100 Sobic003G185200 Sobic003G185200 Sobic004G119000--Sobic003G185200 Sobic002G272800 Sobic002G272800 Sobic004G119000--Sobic002G272800 Sobic004G119000--Sobic009G087800 Sobic010G268300 Sobic010G268300 Sobic004G119000--Sobic010G268300 Sobic002G365100 Sobic002G365100 Sobic004G119000--Sobic002G365100 Sobic004G119000--Sobic007G205800 Sobic004G150400--Sobic004G119000 Sobic010G055500 Sobic010G055500 Sobic004G150400--Sobic010G055500 Sobic004G150400--Sobic007G205800 Sobic004G150400--Sobic002G272800 Sobic010G071200 Sobic010G071200 Sobic004G150400--Sobic010G071200 Sobic001G028400 Sobic001G028400 Sobic004G150400--Sobic001G028400 Sobic004G150400--Sobic006G088100 Sobic004G150400--Sobic003G093600 Sobic006G109300 Sobic006G109300 Sobic004G150400--Sobic006G109300 Sobic001G368400--Sobic003G324000 Sobic007G037900 Sobic007G037900 Sobic001G368400--Sobic007G037900 Sobic001G368400--Sobic009G198900 Sobic003G107800 Sobic003G107800 Sobic001G368400--Sobic003G107800 Sobic003G258400 Sobic003G258400 Sobic001G368400--Sobic003G258400 Sobic001G368400--Sobic007G035600 Sobic001G368400--Sobic007G205800 Sobic004G113800 Sobic004G113800 Sobic001G368400--Sobic004G113800 Sobic005G028400 Sobic005G028400 Sobic001G368400--Sobic005G028400
Octagon: transcription factors


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