Gene annotation
Transcriptome id Sobic.004G083700.1
Synonym Sb04g006900
Functional annotation expressed protein
UniProt C5XXL1
Pfam PF13259
Panther DB PTHR33373 PTHR33373:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G25360 : -
RAP-DB (Rice) LOC_Os02g10720.1 : expressed protein
MaizeGDB (Corn) Zm00025a019559 , Zm00025a034629
Brachypodium -
Barley HORVU6Hr1G038330.1 , HORVU6Hr1G038330.3 , HORVU6Hr1G038330.2 , HORVU6Hr1G038330.5 , HORVU6Hr1G038330.4 , HORVU6Hr1G038330.7 , HORVU6Hr1G038330.6 , HORVU6Hr1G038330.9 , HORVU6Hr1G038330.8 , HORVU6Hr1G038330.11 , HORVU6Hr1G038330.10 , HORVU6Hr1G038330.13 , HORVU6Hr1G038330.12
Wheat -
Populus -


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cDNA sequences
Sobic.004G083700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G056200 WD-40 repeat family protein, putative, expressed -
2 Sobic.007G052900 acetyltransferase, GNAT family, putative, expressed -
3 Sobic.007G108500 lipid phosphatase protein, putative, expressed K18693: DPP1, DPPL, diacylglycerol diphosphate phosphatase / phosphatidate phosphatase
4 Sobic.003G309900 OsFBX26 - F-box domain containing protein, expressed -
5 Sobic.002G309800 casein kinase II subunit beta-4, putative, expressed K03115: casein kinase II subunit beta
6 Sobic.010G280100 expressed protein -
7 Sobic.001G291100 tetraspanin family protein, putative, expressed -
8 Sobic.002G122600 ankyrin repeat domain containing protein, expressed -
9 Sobic.009G198900 trehalose synthase, putative, expressed K16055: trehalose 6-phosphate synthase/phosphatase
10 Sobic.010G268300 protein phosphatase 2C, putative, expressed -
11 Sobic.001G368400 glutaredoxin, putative, expressed K17479: glutaredoxin domain-containing cysteine-rich protein 1
12 Sobic.009G157200 OsFBL23 - F-box domain and LRR containing protein, expressed K13463: coronatine-insensitive protein 1
13 Sobic.009G215800 OsFBX173 - F-box domain containing protein, expressed -
14 Sobic.004G113800 CAPIP1, putative, expressed K14496: abscisic acid receptor PYR/PYL family
15 Sobic.007G205800 chaperone protein dnaJ 10, putative, expressed -
16 Sobic.009G065100 splicing factor, putative, expressed K12850: pre-mRNA-splicing factor 38B
17 Sobic.004G211400 Putative splicing factor(PubMedID : 24356560)@splicing factor, arginine/serine-rich 7, putative, expressed K12896: splicing factor, arginine/serine-rich 7
18 Sobic.004G150400 HSF-type DNA-binding domain containing protein, expressed K09419: heat shock transcription factor, other eukaryote
19 Sobic.001G429300 STE_MEKK_ste11_MAP3K.12 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed K13414: mitogen-activated protein kinase kinase kinase 1
20 Sobic.006G228500 coiled-coil domain-containing protein, putative, expressed K13115: coiled-coil domain-containing protein 130


Gene co-expression network
sample Sobic004G083700 Sobic004G083700 Sobic010G056200 Sobic010G056200 Sobic004G083700--Sobic010G056200 Sobic007G052900 Sobic007G052900 Sobic004G083700--Sobic007G052900 Sobic007G108500 Sobic007G108500 Sobic004G083700--Sobic007G108500 Sobic003G309900 Sobic003G309900 Sobic004G083700--Sobic003G309900 Sobic002G309800 Sobic002G309800 Sobic004G083700--Sobic002G309800 Sobic010G280100 Sobic010G280100 Sobic004G083700--Sobic010G280100 Sobic001G291100 Sobic001G291100 Sobic004G083700--Sobic001G291100 Sobic002G122600 Sobic002G122600 Sobic004G083700--Sobic002G122600 Sobic009G198900 Sobic009G198900 Sobic004G083700--Sobic009G198900 Sobic001G107500 Sobic001G107500 Sobic010G056200--Sobic001G107500 Sobic004G113800 Sobic004G113800 Sobic010G056200--Sobic004G113800 Sobic010G056200--Sobic004G083700 Sobic010G056200--Sobic007G052900 Sobic003G324000 Sobic003G324000 Sobic010G056200--Sobic003G324000 Sobic009G065100 Sobic009G065100 Sobic010G056200--Sobic009G065100 Sobic006G228500 Sobic006G228500 Sobic010G056200--Sobic006G228500 Sobic010G056200--Sobic002G309800 Sobic009G157200 Sobic009G157200 Sobic010G056200--Sobic009G157200 Sobic007G052900--Sobic010G056200 Sobic007G052900--Sobic004G113800 Sobic002G209600 Sobic002G209600 Sobic007G052900--Sobic002G209600 Sobic010G005600 Sobic010G005600 Sobic007G052900--Sobic010G005600 Sobic007G052900--Sobic004G083700 Sobic007G054000 Sobic007G054000 Sobic007G052900--Sobic007G054000 Sobic007G052900--Sobic010G280100 Sobic006G180432 Sobic006G180432 Sobic007G052900--Sobic006G180432 Sobic007G052900--Sobic009G065100 Sobic007G108500--Sobic006G228500 Sobic004G164400 Sobic004G164400 Sobic007G108500--Sobic004G164400 Sobic004G174400 Sobic004G174400 Sobic007G108500--Sobic004G174400 Sobic007G108500--Sobic010G056200 Sobic007G108500--Sobic004G083700 Sobic007G108500--Sobic009G065100 Sobic007G108500--Sobic001G107500 Sobic009G215800 Sobic009G215800 Sobic007G108500--Sobic009G215800 Sobic001G375700 Sobic001G375700 Sobic007G108500--Sobic001G375700 Sobic001G387600 Sobic001G387600 Sobic003G309900--Sobic001G387600 Sobic003G309900--Sobic004G083700 Sobic003G309900--Sobic007G108500 Sobic006G273200 Sobic006G273200 Sobic003G309900--Sobic006G273200 Sobic003G309900--Sobic010G056200 Sobic003G309900--Sobic010G280100 Sobic006G119800 Sobic006G119800 Sobic003G309900--Sobic006G119800 Sobic003G309900--Sobic006G228500 Sobic009G233300 Sobic009G233300 Sobic003G309900--Sobic009G233300 Sobic002G309800--Sobic009G065100 Sobic001G253200 Sobic001G253200 Sobic002G309800--Sobic001G253200 Sobic002G309800--Sobic010G056200 Sobic007G054400 Sobic007G054400 Sobic002G309800--Sobic007G054400 Sobic002G309800--Sobic009G215800 Sobic005G079800 Sobic005G079800 Sobic002G309800--Sobic005G079800 Sobic009G070100 Sobic009G070100 Sobic002G309800--Sobic009G070100 Sobic007G078600 Sobic007G078600 Sobic002G309800--Sobic007G078600 Sobic004G087600 Sobic004G087600 Sobic002G309800--Sobic004G087600 Sobic010G280100--Sobic009G198900 Sobic004G119000 Sobic004G119000 Sobic010G280100--Sobic004G119000 Sobic010G280100--Sobic003G324000 Sobic010G280100--Sobic007G052900 Sobic008G136200 Sobic008G136200 Sobic010G280100--Sobic008G136200 Sobic009G087800 Sobic009G087800 Sobic010G280100--Sobic009G087800 Sobic007G205800 Sobic007G205800 Sobic010G280100--Sobic007G205800 Sobic001G368400 Sobic001G368400 Sobic010G280100--Sobic001G368400 Sobic010G280100--Sobic006G273200 Sobic001G291100--Sobic009G157200 Sobic001G281600 Sobic001G281600 Sobic001G291100--Sobic001G281600 Sobic001G291100--Sobic004G119000 Sobic001G291100--Sobic010G056200 Sobic001G119300 Sobic001G119300 Sobic001G291100--Sobic001G119300 Sobic004G150400 Sobic004G150400 Sobic001G291100--Sobic004G150400 Sobic001G291100--Sobic001G107500 Sobic006G088100 Sobic006G088100 Sobic001G291100--Sobic006G088100 Sobic001G291100--Sobic004G083700 Sobic002G122600--Sobic001G281600 Sobic002G122600--Sobic009G215800 Sobic010G268300 Sobic010G268300 Sobic002G122600--Sobic010G268300 Sobic002G122600--Sobic002G309800 Sobic002G122600--Sobic004G083700 Sobic001G429300 Sobic001G429300 Sobic002G122600--Sobic001G429300 Sobic003G078800 Sobic003G078800 Sobic002G122600--Sobic003G078800 Sobic003G196900 Sobic003G196900 Sobic002G122600--Sobic003G196900 Sobic009G017400 Sobic009G017400 Sobic002G122600--Sobic009G017400 Sobic009G198900--Sobic003G324000 Sobic009G198900--Sobic009G087800 Sobic009G198900--Sobic010G280100 Sobic003G258400 Sobic003G258400 Sobic009G198900--Sobic003G258400 Sobic005G187200 Sobic005G187200 Sobic009G198900--Sobic005G187200 Sobic009G198900--Sobic007G054000 Sobic009G110366 Sobic009G110366 Sobic009G198900--Sobic009G110366 Sobic009G198900--Sobic007G205800 Sobic006G196000 Sobic006G196000 Sobic009G198900--Sobic006G196000
Octagon: transcription factors


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