Gene annotation
Transcriptome id Sobic.006G098200.1
Synonym Sb06g018270
Functional annotation steroid nuclear receptor, ligand-binding, putative, expressed
UniProt C5Y9C3
Pfam -
Panther DB PTHR31133 PTHR31133:SF4
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37030 : -
RAP-DB (Rice) LOC_Os04g37670.1 : steroid nuclear receptor, ligand-binding, putative, expressed
MaizeGDB (Corn) Zm00025a011182
Brachypodium KQJ82880 , KQJ82881
Barley HORVU2Hr1G078890.4 , HORVU2Hr1G078890.5 , HORVU2Hr1G078890.6 , HORVU2Hr1G078890.7 , HORVU2Hr1G078890.1 , HORVU2Hr1G078890.2 , HORVU2Hr1G078890.3 , HORVU2Hr1G078890.8 , HORVU2Hr1G078890.9 , HORVU2Hr1G078890.16 , HORVU2Hr1G078890.14 , HORVU2Hr1G078890.15 , HORVU2Hr1G078890.12 , HORVU2Hr1G078890.13 , HORVU2Hr1G078890.10 , HORVU2Hr1G078890.11 , HORVU1Hr1G003890.1 , HORVU3Hr1G060860.1 , HORVU6Hr1G076540.1 , HORVU6Hr1G076540.2
Wheat TraesCS2D02G315200 , TraesCS2B02G335000 , TraesCS2A02G317300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G033700 wax synthase isoform 1, putative, expressed -
2 Sobic.006G130501 - -
3 Sobic.003G154700 stripe rust resistance protein Yr10, putative, expressed -
4 Sobic.001G347600 paramyosin, putative, expressed -
5 Sobic.001G359400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@cytochrome P450, putative, expressed -
6 Sobic.001G467000 ADP-ribosylation factor, putative, expressed K07955: ADP-ribosylation factor-like protein 8
7 Sobic.002G301500 amidase, putative, expressed K01426: E3.5.1.4, amidase
8 Sobic.007G191100 zinc finger DHHC domain-containing protein, putative, expressed K16675: palmitoyltransferase ZDHHC9/14/18
9 Sobic.010G274500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@catalase isozyme B, putative, expressed K03781: katE, CAT, catB, catalase
10 Sobic.005G007800 F-box/LRR-repeat protein 3, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
11 Sobic.007G035600 MSP domain containing protein, putative, expressed -
12 Sobic.006G213100 UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase
13 Sobic.001G069800 tubulin/FtsZ domain containing protein, putative, expressed K07375: tubulin beta
14 Sobic.009G133900 inosine-uridine preferring nucleoside hydrolase family protein("PubMedID : 26759170,PubMedID : 24597475")@inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
15 Sobic.010G242900 disease resistance protein RGA3, putative, expressed -
16 Sobic.009G102300 hydrolase, acting on glycosyl bonds, putative, expressed K01227: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
17 Sobic.003G185200 chaperone protein dnaJ 49, putative, expressed K09518: DnaJ homolog subfamily B member 12
18 Sobic.007G020300 AT hook motif domain containing protein, expressed -
19 Sobic.010G264400 CAMK_CAMK_like.30 - CAMK includes calcium/calmodulin depedent protein kinases, expressed -
20 Sobic.003G305400 exo70 exocyst complex subunit domain containing protein, expressed K07195: EXOC7, exocyst complex component 7


Gene co-expression network
sample Sobic006G098200 Sobic006G098200 Sobic006G033700 Sobic006G033700 Sobic006G098200--Sobic006G033700 Sobic006G130501 Sobic006G130501 Sobic006G098200--Sobic006G130501 Sobic003G154700 Sobic003G154700 Sobic006G098200--Sobic003G154700 Sobic001G347600 Sobic001G347600 Sobic006G098200--Sobic001G347600 Sobic001G359400 Sobic001G359400 Sobic006G098200--Sobic001G359400 Sobic001G467000 Sobic001G467000 Sobic006G098200--Sobic001G467000 Sobic002G301500 Sobic002G301500 Sobic006G098200--Sobic002G301500 Sobic007G191100 Sobic007G191100 Sobic006G098200--Sobic007G191100 Sobic010G274500 Sobic010G274500 Sobic006G098200--Sobic010G274500 Sobic006G033700--Sobic006G098200 Sobic002G076400 Sobic002G076400 Sobic006G033700--Sobic002G076400 Sobic006G033700--Sobic007G191100 Sobic009G013700 Sobic009G013700 Sobic006G033700--Sobic009G013700 Sobic003G185200 Sobic003G185200 Sobic006G033700--Sobic003G185200 Sobic010G211300 Sobic010G211300 Sobic006G033700--Sobic010G211300 Sobic009G030300 Sobic009G030300 Sobic006G033700--Sobic009G030300 Sobic002G177400 Sobic002G177400 Sobic006G033700--Sobic002G177400 Sobic006G033700--Sobic001G347600 Sobic006G130501--Sobic006G098200 Sobic009G133900 Sobic009G133900 Sobic006G130501--Sobic009G133900 Sobic007G020300 Sobic007G020300 Sobic006G130501--Sobic007G020300 Sobic006G213100 Sobic006G213100 Sobic006G130501--Sobic006G213100 Sobic001G215900 Sobic001G215900 Sobic006G130501--Sobic001G215900 Sobic010G242900 Sobic010G242900 Sobic006G130501--Sobic010G242900 Sobic002G168600 Sobic002G168600 Sobic006G130501--Sobic002G168600 Sobic009G102300 Sobic009G102300 Sobic006G130501--Sobic009G102300 Sobic006G130501--Sobic006G033700 Sobic004G150400 Sobic004G150400 Sobic003G154700--Sobic004G150400 Sobic007G035600 Sobic007G035600 Sobic003G154700--Sobic007G035600 Sobic001G464100 Sobic001G464100 Sobic003G154700--Sobic001G464100 Sobic003G305400 Sobic003G305400 Sobic003G154700--Sobic003G305400 Sobic003G154700--Sobic001G467000 Sobic006G209500 Sobic006G209500 Sobic003G154700--Sobic006G209500 Sobic005G046100 Sobic005G046100 Sobic003G154700--Sobic005G046100 Sobic001G478300 Sobic001G478300 Sobic003G154700--Sobic001G478300 Sobic010G111800 Sobic010G111800 Sobic003G154700--Sobic010G111800 Sobic010G263800 Sobic010G263800 Sobic001G347600--Sobic010G263800 Sobic007G023700 Sobic007G023700 Sobic001G347600--Sobic007G023700 Sobic004G143700 Sobic004G143700 Sobic001G347600--Sobic004G143700 Sobic002G077200 Sobic002G077200 Sobic001G347600--Sobic002G077200 Sobic009G117400 Sobic009G117400 Sobic001G347600--Sobic009G117400 Sobic001G347600--Sobic007G035600 Sobic007G073400 Sobic007G073400 Sobic001G347600--Sobic007G073400 Sobic007G205800 Sobic007G205800 Sobic001G347600--Sobic007G205800 SobicK016900 SobicK016900 Sobic001G347600--SobicK016900 Sobic009G235900 Sobic009G235900 Sobic001G359400--Sobic009G235900 Sobic010G078100 Sobic010G078100 Sobic001G359400--Sobic010G078100 Sobic005G007800 Sobic005G007800 Sobic001G359400--Sobic005G007800 Sobic010G042900 Sobic010G042900 Sobic001G359400--Sobic010G042900 Sobic002G303000 Sobic002G303000 Sobic001G359400--Sobic002G303000 Sobic002G009600 Sobic002G009600 Sobic001G359400--Sobic002G009600 Sobic001G359400--Sobic001G347600 Sobic001G373100 Sobic001G373100 Sobic001G359400--Sobic001G373100 Sobic008G160700 Sobic008G160700 Sobic001G359400--Sobic008G160700 Sobic001G372000 Sobic001G372000 Sobic001G467000--Sobic001G372000 Sobic003G045400 Sobic003G045400 Sobic001G467000--Sobic003G045400 Sobic001G467000--Sobic004G150400 Sobic001G512600 Sobic001G512600 Sobic001G467000--Sobic001G512600 Sobic001G467000--Sobic001G464100 Sobic002G313500 Sobic002G313500 Sobic001G467000--Sobic002G313500 Sobic001G028400 Sobic001G028400 Sobic001G467000--Sobic001G028400 Sobic001G467000--Sobic010G211300 Sobic001G291100 Sobic001G291100 Sobic001G467000--Sobic001G291100 Sobic010G256800 Sobic010G256800 Sobic002G301500--Sobic010G256800 Sobic010G021000 Sobic010G021000 Sobic002G301500--Sobic010G021000 Sobic010G256932 Sobic010G256932 Sobic002G301500--Sobic010G256932 Sobic001G389800 Sobic001G389800 Sobic002G301500--Sobic001G389800 Sobic010G106900 Sobic010G106900 Sobic002G301500--Sobic010G106900 Sobic010G084000 Sobic010G084000 Sobic002G301500--Sobic010G084000 Sobic001G366800 Sobic001G366800 Sobic002G301500--Sobic001G366800 Sobic010G249300 Sobic010G249300 Sobic002G301500--Sobic010G249300 Sobic007G203500 Sobic007G203500 Sobic002G301500--Sobic007G203500 Sobic004G061900 Sobic004G061900 Sobic007G191100--Sobic004G061900 Sobic007G191100--Sobic002G076400 Sobic008G034600 Sobic008G034600 Sobic007G191100--Sobic008G034600 Sobic010G077600 Sobic010G077600 Sobic007G191100--Sobic010G077600 Sobic007G191100--Sobic010G263800 Sobic007G011400 Sobic007G011400 Sobic007G191100--Sobic007G011400 Sobic010G074500 Sobic010G074500 Sobic007G191100--Sobic010G074500 Sobic003G093600 Sobic003G093600 Sobic007G191100--Sobic003G093600 Sobic008G117200 Sobic008G117200 Sobic007G191100--Sobic008G117200 Sobic010G188400 Sobic010G188400 Sobic010G274500--Sobic010G188400 Sobic002G376300 Sobic002G376300 Sobic010G274500--Sobic002G376300 Sobic009G177400 Sobic009G177400 Sobic010G274500--Sobic009G177400 Sobic008G156300 Sobic008G156300 Sobic010G274500--Sobic008G156300 Sobic002G392700 Sobic002G392700 Sobic010G274500--Sobic002G392700 Sobic005G229166 Sobic005G229166 Sobic010G274500--Sobic005G229166 Sobic001G120300 Sobic001G120300 Sobic010G274500--Sobic001G120300 Sobic002G189400 Sobic002G189400 Sobic010G274500--Sobic002G189400 Sobic003G145900 Sobic003G145900 Sobic010G274500--Sobic003G145900
Octagon: transcription factors


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