Gene annotation
| Transcriptome id | Sobic.006G130501.1 |
|---|---|
| Synonym | - |
| Functional annotation | - |
| UniProt | A0A1Z5RDM0 |
| Pfam | PF07690 |
| Panther DB | PTHR11654 PTHR11654:SF100 |
| NCBI CDD | KOG1237; H+/oligopeptide symporter |
| KEGG Orthology | - |
| Gene Ontology | GO:0016021; integral component of membrane GO:0016020membrane GO:0006810transport GO:0005215transporter activity |
Orthologs (automatic annotation)
| TAIR | AT1G59740 : Major facilitator superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os04g41400.1 : peptide transporter PTR2, putative, expressed |
| MaizeGDB (Corn) | Zm00025a010900 |
| Brachypodium | KQJ83346 |
| Barley | HORVU2Hr1G007730.3 , HORVU2Hr1G007730.2 , HORVU2Hr1G007730.1 , HORVU2Hr1G085210.8 , HORVU2Hr1G085210.9 , HORVU2Hr1G085210.2 , HORVU2Hr1G085210.3 , HORVU2Hr1G085210.1 , HORVU2Hr1G085210.6 , HORVU2Hr1G085210.7 , HORVU2Hr1G085210.4 , HORVU2Hr1G085210.5 , HORVU2Hr1G085210.18 , HORVU2Hr1G085210.19 , HORVU2Hr1G085210.10 , HORVU2Hr1G085210.11 , HORVU2Hr1G085210.12 , HORVU2Hr1G085210.13 , HORVU2Hr1G085210.14 , HORVU2Hr1G085210.15 , HORVU2Hr1G085210.16 , HORVU2Hr1G085210.17 , HORVU2Hr1G085210.21 , HORVU2Hr1G085210.20 |
| Wheat | TraesCS2A02G350100 , TraesCS2D02G348500 , TraesCS2D02G348500 , TraesCS2D02G348500 , TraesCS2B02G368600 , TraesCS2B02G368600 , TraesCS2D02G348600 , TraesCS5A02G056100 , TraesCS2B02G368700 |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
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Find similar expressed genes
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| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.006G098200 | steroid nuclear receptor, ligand-binding, putative, expressed | - |
| 2 | Sobic.009G133900 | inosine-uridine preferring nucleoside hydrolase family protein("PubMedID : 26759170,PubMedID : 24597475")@inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed | - |
| 3 | Sobic.007G020300 | AT hook motif domain containing protein, expressed | - |
| 4 | Sobic.006G213100 | UDP-glucose Pyrophosphorylase(PubMedID : 26616172)@UTP--glucose-1-phosphate uridylyltransferase, putative, expressed | K00972: UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase |
| 5 | Sobic.001G215900 | TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed | - |
| 6 | Sobic.010G242900 | disease resistance protein RGA3, putative, expressed | - |
| 7 | Sobic.002G168600 | nucleobase-ascorbate transporter, putative, expressed | K14611: SLC23A1, solute carrier family 23 (nucleobase transporter), member 1 |
| 8 | Sobic.009G102300 | hydrolase, acting on glycosyl bonds, putative, expressed | K01227: mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase |
| 9 | Sobic.006G033700 | wax synthase isoform 1, putative, expressed | - |
| 10 | Sobic.009G013700 | pectinacetylesterase domain containing protein, expressed | - |
| 11 | Sobic.003G154700 | stripe rust resistance protein Yr10, putative, expressed | - |
| 12 | Sobic.006G129700 | amine oxidase, flavin-containing, domain containing protein, expressed | K00231: PPOX, protoporphyrinogen/coproporphyrinogen III oxidase |
| 13 | Sobic.004G247300 | cysteine-rich repeat secretory protein precursor, putative, expressed | - |
| 14 | Sobic.004G067000 | expressed protein | - |
| 15 | Sobic.007G035600 | MSP domain containing protein, putative, expressed | - |
| 16 | Sobic.005G054000 | pollen signalling protein with adenylyl cyclase activity, putative, expressed | - |
| 17 | Sobic.006G133600 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein | - |
| 18 | Sobic.001G056300 | BHLH transcription factor, putative, expressed | - |
| 19 | Sobic.006G262600 | expressed protein | - |
| 20 | Sobic.007G191100 | zinc finger DHHC domain-containing protein, putative, expressed | K16675: palmitoyltransferase ZDHHC9/14/18 |
Gene co-expression network
Octagon: transcription factors
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