Gene annotation
Transcriptome id Sobic.002G168600.1
Synonym Sb02g021450
Functional annotation nucleobase-ascorbate transporter, putative, expressed
UniProt A0A1B6QBW3
Pfam PF00860
Panther DB PTHR11119 PTHR11119:SF47
NCBI CDD -
KEGG Orthology K14611; SLC23A1, solute carrier family 23 (nucleobase transporter), member 1
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G34190 : Xanthine/uracil permease family protein
RAP-DB (Rice) LOC_Os09g15170.1 : nucleobase-ascorbate transporter, putative, expressed
MaizeGDB (Corn) Zm00025a029860 , Zm00025a013735
Brachypodium PNT67992 , KQJ89826 , KQJ98047
Barley HORVU5Hr1G055560.21 , HORVU5Hr1G055560.25 , HORVU5Hr1G055560.24 , HORVU5Hr1G055560.26 , HORVU5Hr1G055560.22 , HORVU3Hr1G073180.14 , HORVU3Hr1G073180.15 , HORVU3Hr1G073180.11 , HORVU3Hr1G073180.12 , HORVU3Hr1G073180.13 , HORVU5Hr1G055560.20 , HORVU5Hr1G055560.23 , HORVU5Hr1G055560.6 , HORVU5Hr1G055560.7 , HORVU5Hr1G055560.4 , HORVU5Hr1G055560.5 , HORVU5Hr1G055560.2 , HORVU5Hr1G055560.1 , HORVU5Hr1G055560.8 , HORVU5Hr1G055560.9 , HORVU3Hr1G073180.2 , HORVU3Hr1G073180.3 , HORVU3Hr1G073180.9 , HORVU3Hr1G073180.7 , HORVU5Hr1G055560.18 , HORVU5Hr1G055560.19 , HORVU5Hr1G055560.14 , HORVU5Hr1G055560.15 , HORVU5Hr1G055560.16 , HORVU5Hr1G055560.17 , HORVU5Hr1G055560.10 , HORVU5Hr1G055560.11 , HORVU5Hr1G055560.12 , HORVU5Hr1G055560.13
Wheat TraesCS5B02G180200 , TraesCS5D02G186600 , TraesCS5A02G182200 , TraesCS5A02G182200
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G242900 disease resistance protein RGA3, putative, expressed -
2 Sobic.001G215900 TKL_IRAK_DUF26-lf.4 - DUF26 kinases have homology to DUF26 containing loci, expressed -
3 Sobic.004G134100 glycosyltransferase, putative, expressed -
4 Sobic.006G130501 - -
5 Sobic.009G013700 pectinacetylesterase domain containing protein, expressed -
6 Sobic.005G159600 lymphoid organ expressed yellow head virus receptor protein, putative, expressed -
7 Sobic.004G247300 cysteine-rich repeat secretory protein precursor, putative, expressed -
8 Sobic.005G054700 pollen signalling protein with adenylyl cyclase activity, putative, expressed -
9 Sobic.008G086200 expressed protein -
10 Sobic.006G262600 expressed protein -
11 Sobic.001G361800 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@proline-rich family protein, putative, expressed -
12 Sobic.004G289500 - -
13 Sobic.002G034301 - -
14 Sobic.004G225700 F-box/LRR-repeat protein 2, putative, expressed K10268: F-box and leucine-rich repeat protein 2/20
15 Sobic.009G133900 inosine-uridine preferring nucleoside hydrolase family protein("PubMedID : 26759170,PubMedID : 24597475")@inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed -
16 Sobic.006G236700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, stem and root, expression induced by IAA, BR and ABA treatments"(PubMedID : 20528920)@multidrug resistance protein, putative, expressed K05658: ABCB1, ATP-binding cassette, subfamily B (MDR/TAP), member 1
17 Sobic.007G009000 expressed protein -
18 Sobic.004G054000 expressed protein -
19 Sobic.001G538932 - -
20 Sobic.002G218700 mitochondrial carrier protein, putative, expressed K15121: solute carrier family 25, member 44


Gene co-expression network
sample Sobic002G168600 Sobic002G168600 Sobic010G242900 Sobic010G242900 Sobic002G168600--Sobic010G242900 Sobic001G215900 Sobic001G215900 Sobic002G168600--Sobic001G215900 Sobic004G134100 Sobic004G134100 Sobic002G168600--Sobic004G134100 Sobic006G130501 Sobic006G130501 Sobic002G168600--Sobic006G130501 Sobic009G013700 Sobic009G013700 Sobic002G168600--Sobic009G013700 Sobic005G159600 Sobic005G159600 Sobic002G168600--Sobic005G159600 Sobic004G247300 Sobic004G247300 Sobic002G168600--Sobic004G247300 Sobic005G054700 Sobic005G054700 Sobic002G168600--Sobic005G054700 Sobic008G086200 Sobic008G086200 Sobic002G168600--Sobic008G086200 Sobic010G242900--Sobic001G215900 Sobic010G242900--Sobic004G134100 Sobic010G242900--Sobic002G168600 Sobic010G242900--Sobic009G013700 Sobic010G138500 Sobic010G138500 Sobic010G242900--Sobic010G138500 Sobic001G366800 Sobic001G366800 Sobic010G242900--Sobic001G366800 Sobic010G242900--Sobic006G130501 Sobic010G242900--Sobic004G247300 Sobic006G098200 Sobic006G098200 Sobic010G242900--Sobic006G098200 Sobic001G215900--Sobic010G242900 Sobic001G215900--Sobic001G366800 Sobic001G215900--Sobic002G168600 Sobic001G215900--Sobic010G138500 Sobic001G215900--Sobic004G134100 Sobic001G215900--Sobic004G247300 Sobic001G215900--Sobic006G130501 Sobic001G215900--Sobic009G013700 Sobic009G133900 Sobic009G133900 Sobic001G215900--Sobic009G133900 Sobic009G026200 Sobic009G026200 Sobic004G134100--Sobic009G026200 Sobic004G134100--Sobic010G242900 Sobic001G069800 Sobic001G069800 Sobic004G134100--Sobic001G069800 Sobic004G006700 Sobic004G006700 Sobic004G134100--Sobic004G006700 Sobic004G134100--Sobic005G159600 Sobic004G134100--Sobic010G138500 Sobic004G134100--Sobic001G215900 Sobic004G134100--Sobic001G366800 Sobic003G151300 Sobic003G151300 Sobic004G134100--Sobic003G151300 Sobic006G130501--Sobic006G098200 Sobic006G130501--Sobic009G133900 Sobic007G020300 Sobic007G020300 Sobic006G130501--Sobic007G020300 Sobic006G213100 Sobic006G213100 Sobic006G130501--Sobic006G213100 Sobic006G130501--Sobic001G215900 Sobic006G130501--Sobic010G242900 Sobic006G130501--Sobic002G168600 Sobic009G102300 Sobic009G102300 Sobic006G130501--Sobic009G102300 Sobic006G033700 Sobic006G033700 Sobic006G130501--Sobic006G033700 Sobic009G030300 Sobic009G030300 Sobic009G013700--Sobic009G030300 Sobic008G008400 Sobic008G008400 Sobic009G013700--Sobic008G008400 Sobic009G013700--Sobic006G033700 Sobic009G013700--Sobic010G242900 Sobic009G013700--Sobic001G215900 Sobic001G226000 Sobic001G226000 Sobic009G013700--Sobic001G226000 Sobic003G347300 Sobic003G347300 Sobic009G013700--Sobic003G347300 Sobic009G013700--Sobic002G168600 Sobic002G218700 Sobic002G218700 Sobic009G013700--Sobic002G218700 Sobic003G277900 Sobic003G277900 Sobic005G159600--Sobic003G277900 Sobic004G053300 Sobic004G053300 Sobic005G159600--Sobic004G053300 Sobic005G159600--Sobic004G134100 Sobic005G159600--Sobic008G086200 Sobic009G123500 Sobic009G123500 Sobic005G159600--Sobic009G123500 Sobic002G393200 Sobic002G393200 Sobic005G159600--Sobic002G393200 Sobic004G225700 Sobic004G225700 Sobic005G159600--Sobic004G225700 Sobic005G159600--Sobic009G026200 Sobic005G159600--Sobic002G168600 Sobic004G247300--Sobic005G054700 Sobic001G514400 Sobic001G514400 Sobic004G247300--Sobic001G514400 Sobic009G175200 Sobic009G175200 Sobic004G247300--Sobic009G175200 Sobic002G034301 Sobic002G034301 Sobic004G247300--Sobic002G034301 Sobic004G247300--Sobic001G215900 Sobic009G099700 Sobic009G099700 Sobic004G247300--Sobic009G099700 Sobic004G247300--Sobic001G366800 Sobic004G247300--Sobic010G242900 Sobic004G247300--Sobic006G213100 Sobic005G054700--Sobic004G247300 Sobic005G054700--Sobic009G099700 Sobic001G361800 Sobic001G361800 Sobic005G054700--Sobic001G361800 Sobic005G054700--Sobic001G514400 Sobic005G054700--Sobic002G034301 Sobic005G054700--Sobic009G175200 Sobic005G054700--Sobic002G168600 Sobic010G161900 Sobic010G161900 Sobic005G054700--Sobic010G161900 Sobic005G054700--Sobic002G393200 Sobic008G086200--Sobic004G225700 Sobic008G086200--Sobic009G175200 Sobic003G174900 Sobic003G174900 Sobic008G086200--Sobic003G174900 Sobic003G375000 Sobic003G375000 Sobic008G086200--Sobic003G375000 Sobic008G086200--Sobic009G123500 Sobic008G190500 Sobic008G190500 Sobic008G086200--Sobic008G190500 Sobic004G289500 Sobic004G289500 Sobic008G086200--Sobic004G289500 Sobic009G164900 Sobic009G164900 Sobic008G086200--Sobic009G164900 Sobic010G118700 Sobic010G118700 Sobic008G086200--Sobic010G118700
Octagon: transcription factors


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