Gene annotation
Transcriptome id Sobic.007G009000.1
Synonym Sb07g000960
Functional annotation expressed protein
UniProt C5YLV1
Pfam -
Panther DB PTHR31827 PTHR31827:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G64550 : loricrin-related
RAP-DB (Rice) LOC_Os06g27830.1 : expressed protein
MaizeGDB (Corn) Zm00025a040181 , Zm00025a030303
Brachypodium PNT66430 , PNT66428 , PNT66429 , KQJ94572 , KQJ94571 , KQJ94570
Barley HORVU6Hr1G044440.8 , HORVU6Hr1G044440.9 , HORVU6Hr1G044440.4 , HORVU6Hr1G044440.5 , HORVU6Hr1G044440.6 , HORVU6Hr1G044440.7 , HORVU6Hr1G044440.1 , HORVU6Hr1G044440.2 , HORVU6Hr1G044440.3 , HORVU6Hr1G044440.10 , HORVU6Hr1G044440.11
Wheat TraesCS6A02G044600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G035900 calmodulin-binding protein, putative, expressed -
2 Sobic.001G230900 - K07910: Ras-related protein Rab-18
3 Sobic.001G030400 protein kinase family protein, putative, expressed -
4 Sobic.003G003700 ABIL2, putative, expressed -
5 Sobic.001G157800 26S protease regulatory subunit 6B, putative, expressed K03063: PSMC4, 26S proteasome regulatory subunit T3
6 Sobic.003G024800 CGMC_GSK.2 - CGMC includes CDA, MAPK, GSK3, and CLKC kinases, expressed K14502: protein brassinosteroid insensitive 2
7 Sobic.004G134100 glycosyltransferase, putative, expressed -
8 Sobic.001G402600 expressed protein -
9 Sobic.001G445000 cation efflux family protein, putative, expressed -
10 Sobic.010G105600 RNA recognition motif containing protein, putative, expressed K12881: THOC4, THO complex subunit 4
11 Sobic.008G176800 expressed protein -
12 Sobic.003G084300 mediator of RNA polymerase II transcription subunit 22, putative, expressed K15139: mediator of RNA polymerase II transcription subunit 22
13 Sobic.001G040300 expressed protein -
14 Sobic.004G262200 DNA binding protein, putative, expressed -
15 Sobic.009G124200 down-regulated TF in developmental senescence(PubMedID : 27586543)@SMOS1(Ortholog in rice:Hirano et al. (2017))(PubMedID : 31659924)@AP2 domain containing protein, expressed K09285: OVM, AP2-like factor, ANT lineage
16 Sobic.004G067000 expressed protein -
17 Sobic.004G220400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Lyase(PubMedID : 30367619)@phenylalanine ammonia-lyase, putative, expressed K10775: phenylalanine ammonia-lyase
18 Sobic.010G163900 BES1/BZR1 homolog protein, putative, expressed -
19 Sobic.002G322300 expressed protein -
20 Sobic.009G036900 RNA recognition motif containing protein, putative, expressed K12876: RBM8A, RNA-binding protein 8A


Gene co-expression network
sample Sobic007G009000 Sobic007G009000 Sobic008G035900 Sobic008G035900 Sobic007G009000--Sobic008G035900 Sobic001G230900 Sobic001G230900 Sobic007G009000--Sobic001G230900 Sobic001G030400 Sobic001G030400 Sobic007G009000--Sobic001G030400 Sobic003G003700 Sobic003G003700 Sobic007G009000--Sobic003G003700 Sobic001G157800 Sobic001G157800 Sobic007G009000--Sobic001G157800 Sobic003G024800 Sobic003G024800 Sobic007G009000--Sobic003G024800 Sobic004G134100 Sobic004G134100 Sobic007G009000--Sobic004G134100 Sobic001G402600 Sobic001G402600 Sobic007G009000--Sobic001G402600 Sobic001G445000 Sobic001G445000 Sobic007G009000--Sobic001G445000 Sobic008G035900--Sobic003G003700 Sobic008G035900--Sobic007G009000 Sobic002G357800 Sobic002G357800 Sobic008G035900--Sobic002G357800 Sobic004G287800 Sobic004G287800 Sobic008G035900--Sobic004G287800 Sobic003G247600 Sobic003G247600 Sobic008G035900--Sobic003G247600 Sobic008G157000 Sobic008G157000 Sobic008G035900--Sobic008G157000 Sobic001G528600 Sobic001G528600 Sobic008G035900--Sobic001G528600 Sobic001G107200 Sobic001G107200 Sobic008G035900--Sobic001G107200 Sobic004G331200 Sobic004G331200 Sobic008G035900--Sobic004G331200 Sobic010G238700 Sobic010G238700 Sobic001G230900--Sobic010G238700 Sobic009G036900 Sobic009G036900 Sobic001G230900--Sobic009G036900 Sobic010G144400 Sobic010G144400 Sobic001G230900--Sobic010G144400 Sobic002G068300 Sobic002G068300 Sobic001G230900--Sobic002G068300 Sobic001G230900--Sobic003G024800 Sobic008G132800 Sobic008G132800 Sobic001G230900--Sobic008G132800 Sobic010G228600 Sobic010G228600 Sobic001G230900--Sobic010G228600 Sobic001G090000 Sobic001G090000 Sobic001G230900--Sobic001G090000 Sobic001G040300 Sobic001G040300 Sobic001G230900--Sobic001G040300 Sobic006G133700 Sobic006G133700 Sobic001G030400--Sobic006G133700 Sobic001G468500 Sobic001G468500 Sobic001G030400--Sobic001G468500 Sobic003G084300 Sobic003G084300 Sobic001G030400--Sobic003G084300 Sobic002G247800 Sobic002G247800 Sobic001G030400--Sobic002G247800 Sobic009G165500 Sobic009G165500 Sobic001G030400--Sobic009G165500 Sobic010G222100 Sobic010G222100 Sobic001G030400--Sobic010G222100 Sobic001G030400--Sobic007G009000 Sobic001G030400--Sobic004G331200 Sobic002G353200 Sobic002G353200 Sobic001G030400--Sobic002G353200 Sobic003G003700--Sobic001G468500 Sobic003G420100 Sobic003G420100 Sobic003G003700--Sobic003G420100 Sobic008G143000 Sobic008G143000 Sobic003G003700--Sobic008G143000 Sobic009G242501 Sobic009G242501 Sobic003G003700--Sobic009G242501 Sobic003G003700--Sobic003G247600 Sobic003G003700--Sobic001G528600 Sobic003G003700--Sobic008G035900 Sobic003G003700--Sobic008G157000 Sobic004G286700 Sobic004G286700 Sobic003G003700--Sobic004G286700 Sobic001G157800--Sobic003G084300 Sobic006G200000 Sobic006G200000 Sobic001G157800--Sobic006G200000 Sobic003G396600 Sobic003G396600 Sobic001G157800--Sobic003G396600 Sobic002G385400 Sobic002G385400 Sobic001G157800--Sobic002G385400 Sobic003G096000 Sobic003G096000 Sobic001G157800--Sobic003G096000 Sobic003G294100 Sobic003G294100 Sobic001G157800--Sobic003G294100 Sobic010G265900 Sobic010G265900 Sobic001G157800--Sobic010G265900 Sobic002G361700 Sobic002G361700 Sobic001G157800--Sobic002G361700 Sobic007G044400 Sobic007G044400 Sobic001G157800--Sobic007G044400 Sobic003G024800--Sobic009G036900 Sobic004G349100 Sobic004G349100 Sobic003G024800--Sobic004G349100 Sobic001G309100 Sobic001G309100 Sobic003G024800--Sobic001G309100 Sobic009G034400 Sobic009G034400 Sobic003G024800--Sobic009G034400 Sobic001G350501 Sobic001G350501 Sobic003G024800--Sobic001G350501 Sobic007G063200 Sobic007G063200 Sobic003G024800--Sobic007G063200 Sobic010G071200 Sobic010G071200 Sobic003G024800--Sobic010G071200 Sobic008G142700 Sobic008G142700 Sobic003G024800--Sobic008G142700 Sobic003G024800--Sobic010G228600 Sobic009G026200 Sobic009G026200 Sobic004G134100--Sobic009G026200 Sobic010G242900 Sobic010G242900 Sobic004G134100--Sobic010G242900 Sobic001G069800 Sobic001G069800 Sobic004G134100--Sobic001G069800 Sobic004G006700 Sobic004G006700 Sobic004G134100--Sobic004G006700 Sobic005G159600 Sobic005G159600 Sobic004G134100--Sobic005G159600 Sobic010G138500 Sobic010G138500 Sobic004G134100--Sobic010G138500 Sobic001G215900 Sobic001G215900 Sobic004G134100--Sobic001G215900 Sobic001G366800 Sobic001G366800 Sobic004G134100--Sobic001G366800 Sobic003G151300 Sobic003G151300 Sobic004G134100--Sobic003G151300 Sobic004G242100 Sobic004G242100 Sobic001G402600--Sobic004G242100 Sobic007G192100 Sobic007G192100 Sobic001G402600--Sobic007G192100 Sobic001G126200 Sobic001G126200 Sobic001G402600--Sobic001G126200 Sobic007G092100 Sobic007G092100 Sobic001G402600--Sobic007G092100 Sobic003G358300 Sobic003G358300 Sobic001G402600--Sobic003G358300 Sobic006G143500 Sobic006G143500 Sobic001G402600--Sobic006G143500 Sobic001G285300 Sobic001G285300 Sobic001G402600--Sobic001G285300 Sobic003G224300 Sobic003G224300 Sobic001G402600--Sobic003G224300 Sobic007G073600 Sobic007G073600 Sobic001G402600--Sobic007G073600 Sobic009G129500 Sobic009G129500 Sobic001G445000--Sobic009G129500 Sobic001G445000--Sobic007G009000 Sobic001G112800 Sobic001G112800 Sobic001G445000--Sobic001G112800 Sobic004G001000 Sobic004G001000 Sobic001G445000--Sobic004G001000 Sobic001G242800 Sobic001G242800 Sobic001G445000--Sobic001G242800 Sobic009G117000 Sobic009G117000 Sobic001G445000--Sobic009G117000 Sobic002G319200 Sobic002G319200 Sobic001G445000--Sobic002G319200 Sobic001G131100 Sobic001G131100 Sobic001G445000--Sobic001G131100 Sobic002G392800 Sobic002G392800 Sobic001G445000--Sobic002G392800
Octagon: transcription factors


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