Gene annotation
Transcriptome id Sobic.002G322300.1
Synonym Sb02g034990
Functional annotation expressed protein
UniProt C5XA43
Pfam -
Panther DB PTHR33974 PTHR33974:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G21710 : -
RAP-DB (Rice) LOC_Os07g34020.1 : expressed protein
MaizeGDB (Corn) Zm00025a048244
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G163600 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@expressed protein -
2 Sobic.004G221300 transporter-related, putative, expressed K15285: solute carrier family 35, member E3
3 Sobic.001G245800 expressed protein -
4 Sobic.008G157000 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA and BR treatments"(PubMedID : 20499123)@OsIAA31 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
5 Sobic.006G036400 zinc finger, C3HC4 type domain containing protein, expressed -
6 Sobic.003G296400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CESA4 - cellulose synthase, expressed K10999: cellulose synthase A
7 Sobic.002G205500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@CESA9 - cellulose synthase, expressed K10999: cellulose synthase A
8 Sobic.009G034300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
9 Sobic.002G203900 methyladenine glycosylase, putative, expressed K01246: DNA-3-methyladenine glycosylase I
10 Sobic.003G052900 "domain confirmed by Pfam database, expression supported by NCBI EST database, expression induced by BR treatment"(PubMedID : 20499123)@-(PubMedID : 23108465)@LOB family(PubMedID : 16399802)@DUF260 domain containing protein, putative, expressed -
11 Sobic.002G207200 - -
12 Sobic.001G224300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@-(PubMedID : 28944535)@CESA7 - cellulose synthase, expressed K10999: cellulose synthase A
13 Sobic.001G258600 GDSL-like lipase/acylhydrolase, putative, expressed -
14 Sobic.001G460400 expressed protein -
15 Sobic.003G247600 serine/threonine-protein kinase, putative, expressed -
16 Sobic.002G167600 2-aminoethanethiol dioxygenase, putative, expressed K10712: cysteamine dioxygenase
17 Sobic.010G131400 rho GDP-dissociation inhibitor 1, putative, expressed K12462: ARHGDI, Rho GDP-dissociation inhibitor
18 Sobic.007G009000 expressed protein -
19 Sobic.009G074500 expressed protein -
20 Sobic.010G218300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DNA binding protein, putative, expressed -


Gene co-expression network
sample Sobic002G322300 Sobic002G322300 Sobic004G163600 Sobic004G163600 Sobic002G322300--Sobic004G163600 Sobic004G221300 Sobic004G221300 Sobic002G322300--Sobic004G221300 Sobic001G245800 Sobic001G245800 Sobic002G322300--Sobic001G245800 Sobic008G157000 Sobic008G157000 Sobic002G322300--Sobic008G157000 Sobic006G036400 Sobic006G036400 Sobic002G322300--Sobic006G036400 Sobic003G296400 Sobic003G296400 Sobic002G322300--Sobic003G296400 Sobic002G205500 Sobic002G205500 Sobic002G322300--Sobic002G205500 Sobic009G034300 Sobic009G034300 Sobic002G322300--Sobic009G034300 Sobic002G203900 Sobic002G203900 Sobic002G322300--Sobic002G203900 Sobic004G163600--Sobic002G322300 Sobic004G163600--Sobic002G205500 Sobic003G366300 Sobic003G366300 Sobic004G163600--Sobic003G366300 Sobic004G163600--Sobic003G296400 Sobic007G223600 Sobic007G223600 Sobic004G163600--Sobic007G223600 Sobic001G224300 Sobic001G224300 Sobic004G163600--Sobic001G224300 Sobic009G079100 Sobic009G079100 Sobic004G163600--Sobic009G079100 Sobic001G406700 Sobic001G406700 Sobic004G163600--Sobic001G406700 Sobic009G162500 Sobic009G162500 Sobic004G163600--Sobic009G162500 Sobic001G360800 Sobic001G360800 Sobic004G221300--Sobic001G360800 Sobic004G221300--Sobic009G034300 Sobic001G409100 Sobic001G409100 Sobic004G221300--Sobic001G409100 Sobic003G410800 Sobic003G410800 Sobic004G221300--Sobic003G410800 Sobic004G221300--Sobic003G296400 Sobic008G110200 Sobic008G110200 Sobic004G221300--Sobic008G110200 Sobic004G221300--Sobic001G224300 Sobic009G220100 Sobic009G220100 Sobic004G221300--Sobic009G220100 Sobic004G221300--Sobic006G036400 Sobic010G138300 Sobic010G138300 Sobic001G245800--Sobic010G138300 Sobic009G074500 Sobic009G074500 Sobic001G245800--Sobic009G074500 Sobic001G261460 Sobic001G261460 Sobic001G245800--Sobic001G261460 Sobic010G047600 Sobic010G047600 Sobic001G245800--Sobic010G047600 Sobic001G514200 Sobic001G514200 Sobic001G245800--Sobic001G514200 Sobic009G199001 Sobic009G199001 Sobic001G245800--Sobic009G199001 Sobic009G221800 Sobic009G221800 Sobic001G245800--Sobic009G221800 Sobic008G102800 Sobic008G102800 Sobic001G245800--Sobic008G102800 Sobic004G170800 Sobic004G170800 Sobic001G245800--Sobic004G170800 Sobic002G357800 Sobic002G357800 Sobic008G157000--Sobic002G357800 Sobic003G236600 Sobic003G236600 Sobic008G157000--Sobic003G236600 Sobic001G250100 Sobic001G250100 Sobic008G157000--Sobic001G250100 Sobic004G165300 Sobic004G165300 Sobic008G157000--Sobic004G165300 Sobic003G003700 Sobic003G003700 Sobic008G157000--Sobic003G003700 Sobic003G426200 Sobic003G426200 Sobic008G157000--Sobic003G426200 Sobic001G112800 Sobic001G112800 Sobic008G157000--Sobic001G112800 Sobic010G218300 Sobic010G218300 Sobic008G157000--Sobic010G218300 Sobic002G094600 Sobic002G094600 Sobic008G157000--Sobic002G094600 Sobic006G036400--Sobic001G224300 Sobic006G036400--Sobic003G296400 Sobic003G062000 Sobic003G062000 Sobic006G036400--Sobic003G062000 Sobic006G036400--Sobic002G205500 Sobic006G036400--Sobic001G409100 Sobic006G036400--Sobic009G034300 Sobic009G226900 Sobic009G226900 Sobic006G036400--Sobic009G226900 Sobic006G036400--Sobic001G360800 Sobic006G036400--Sobic004G221300 Sobic003G296400--Sobic002G205500 Sobic003G296400--Sobic001G224300 Sobic003G296400--Sobic006G036400 Sobic003G296400--Sobic007G223600 Sobic006G226200 Sobic006G226200 Sobic003G296400--Sobic006G226200 Sobic003G296400--Sobic009G226900 Sobic009G048000 Sobic009G048000 Sobic003G296400--Sobic009G048000 Sobic003G296400--Sobic004G221300 Sobic003G236701 Sobic003G236701 Sobic003G296400--Sobic003G236701 Sobic002G205500--Sobic003G296400 Sobic002G205500--Sobic001G224300 Sobic002G205500--Sobic007G223600 Sobic002G205500--Sobic006G226200 Sobic005G229100 Sobic005G229100 Sobic002G205500--Sobic005G229100 Sobic003G387500 Sobic003G387500 Sobic002G205500--Sobic003G387500 Sobic002G205500--Sobic009G048000 Sobic002G205500--Sobic006G036400 Sobic002G205500--Sobic009G226900 Sobic009G034300--Sobic001G360800 Sobic009G034300--Sobic004G221300 Sobic009G034300--Sobic001G224300 Sobic009G034300--Sobic003G410800 Sobic009G034300--Sobic002G203900 Sobic009G034300--Sobic006G036400 Sobic002G167600 Sobic002G167600 Sobic009G034300--Sobic002G167600 Sobic009G034300--Sobic001G409100 Sobic010G180100 Sobic010G180100 Sobic009G034300--Sobic010G180100 Sobic001G360700 Sobic001G360700 Sobic002G203900--Sobic001G360700 Sobic002G203900--Sobic002G167600 Sobic004G047600 Sobic004G047600 Sobic002G203900--Sobic004G047600 Sobic007G090472 Sobic007G090472 Sobic002G203900--Sobic007G090472 Sobic002G146000 Sobic002G146000 Sobic002G203900--Sobic002G146000 Sobic006G135300 Sobic006G135300 Sobic002G203900--Sobic006G135300 Sobic007G047300 Sobic007G047300 Sobic002G203900--Sobic007G047300 Sobic002G203900--Sobic001G360800 Sobic007G073000 Sobic007G073000 Sobic002G203900--Sobic007G073000
Octagon: transcription factors


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